RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, human

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAIP-208	ENST00000482582	CATIP	Q7Z7H3	387 aa		13.77	□□□□□ -0.21
TRAIP-208	ENST00000482582	NUP133	Q8WUM0	1156 aa		13.77	□□□□□ -0.21
TRAIP-208	ENST00000482582	TANGO6	Q9C0B7	1094 aa		13.77	□□□□□ -0.21
TRAIP-208	ENST00000482582	ARHGAP39	Q9C0H5	1083 aa		13.77	□□□□□ -0.21
TRAIP-208	ENST00000482582	MAD2L2	Q9UI95	211 aa		13.77	□□□□□ -0.21
TRAIP-208	ENST00000482582	SLC45A1	Q9Y2W3	748 aa		13.77	□□□□□ -0.21
TRAIP-208	ENST00000482582	PALM3	A6NDB9	673 aa	Predicted RBP	13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	CD2BP2	O95400	341 aa	Known RBP	13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	SLC16A2	P36021	539 aa		13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	EVC	P57679	992 aa		13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	GRM4	Q14833	912 aa		13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	RABEP1	Q15276	862 aa		13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	TAF1C	Q15572	869 aa	Predicted RBP	13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	NOL8	Q76FK4	1167 aa	Known RBP	13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	CCDC144CP	Q8IYA2	1237 aa		13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	UBA5	Q9GZZ9	404 aa		13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	ZCCHC17	Q9NP64	241 aa	Known RBP	13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	ISY1	Q9ULR0	285 aa	Known RBP	13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	SLC12A7	Q9Y666	1083 aa		13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	MYH6	P13533	1939 aa		13.76	□□□□□ -0.21
TRAIP-208	ENST00000482582	DOCK3	Q8IZD9	2030 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	ADGRA2	Q96PE1	1338 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	FLOT1	O75955	427 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	DDAH1	O94760	285 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	PARP1	P09874	1014 aa	Known RBP	13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	PDIA3	P30101	505 aa	Known RBP	13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	DSG3	P32926	999 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	IRX3	P78415	501 aa	Predicted RBP	13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	COG2	Q14746	738 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	OTUD7B	Q6GQQ9	843 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	BTNL9	Q6UXG8	535 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	NBPF11	Q86T75	865 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	MICU3	Q86XE3	530 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	ATG4C	Q96DT6	458 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	FEM1B	Q9UK73	627 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	TPCN1	Q9ULQ1	816 aa		13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.75	□□□□□ -0.21
TRAIP-208	ENST00000482582		A0A0G2JMZ2	1700 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	GOLGA8B	A8MQT2	603 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	ZBTB43	O43298	467 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	PLA2G6	O60733	806 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	CNMD	O75829	334 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	PLEKHA8P1	O95397	391 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	LARGE1	O95461	756 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	ALDH1A1	P00352	501 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	OSBP	P22059	807 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	CDC27	P30260	824 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	SNAP25	P60880	206 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	HERVK_113	P62684	666 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	ASPRV1	Q53RT3	343 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	GPATCH4	Q5T3I0	446 aa	Known RBP	13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	FANCB	Q8NB91	859 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	KIFC2	Q96AC6	838 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	MAP3K14	Q99558	947 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	SLF1	Q9BQI6	1058 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	EFCC1	Q9HA90	598 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	TXNRD2	Q9NNW7	524 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	PPP1R9A	Q9ULJ8	1098 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	ADAMTS5	Q9UNA0	930 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	PTCH2	Q9Y6C5	1203 aa		13.74	□□□□□ -0.21
TRAIP-208	ENST00000482582	KLRF2	D3W0D1	207 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	CTGF	P29279	349 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	ADD1	P35611	737 aa	Known RBP	13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	STAT2	P52630	851 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	CCT2	P78371	535 aa	Known RBP	13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	SP3	Q02447	781 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	IK	Q13123	557 aa	Predicted RBP	13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	STK3	Q13188	491 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	SYNE3	Q6ZMZ3	975 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	CMTR1	Q8N1G2	835 aa	Known RBP	13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	SRBD1	Q8N5C6	995 aa	Known RBP	13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	PRPF38A	Q8NAV1	312 aa	Known RBP	13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	CHURC1	Q8WUH1	139 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	ARMC5	Q96C12	935 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	ZNF274	Q96GC6	653 aa	Predicted RBP	13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	PARK7	Q99497	189 aa	Known RBP	13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	NCOA5	Q9HCD5	579 aa	Known RBP	13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	HOXC10	Q9NYD6	342 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	BTBD7	Q9P203	1132 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	RBPJL	Q9UBG7	517 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	CPA4	Q9UI42	421 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	PNMA3	Q9UL41	463 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	PRR12	Q9ULL5	1215 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	SZT2	Q5T011	3432 aa		13.73	□□□□□ -0.21
TRAIP-208	ENST00000482582	GOLGA8A	A7E2F4	631 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	VWA5A	O00534	786 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	CYTH3	O43739	400 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	TLR2	O60603	784 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	DTNB	O60941	627 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	CALM1	P0DP23	149 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	CALM2	P0DP24	149 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	CALM3	P0DP25	149 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	ANKRD1	Q15327	319 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	ME3	Q16798	604 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582		Q3C1V9	767 aa		13.72	□□□□□ -0.21
TRAIP-208	ENST00000482582	SYDE2	Q5VT97	1194 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms