RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ZNF214Q9UL59 606 aaPredicted RBP23.52■■□□□ 1.36
MSH5-215ENST00000482280 ZMYM6O95789 1325 aa23.52■■□□□ 1.36
MSH5-215ENST00000482280 PCP11498 1178 aaKnown RBP23.51■■□□□ 1.35
MSH5-215ENST00000482280 MFSD6Q6ZSS7 791 aa23.51■■□□□ 1.35
MSH5-215ENST00000482280 ZNF589Q86UQ0 364 aaPredicted RBP23.51■■□□□ 1.35
MSH5-215ENST00000482280 FAM160B2Q86V87 743 aa23.51■■□□□ 1.35
MSH5-215ENST00000482280 TMEM232C9JQI7 657 aa23.5■■□□□ 1.35
MSH5-215ENST00000482280 COBLO75128 1261 aa23.5■■□□□ 1.35
MSH5-215ENST00000482280 HAND2P61296 217 aa23.5■■□□□ 1.35
MSH5-215ENST00000482280 GMCL1Q96IK5 515 aa23.5■■□□□ 1.35
MSH5-215ENST00000482280 MTMR7Q9Y216 660 aa23.5■■□□□ 1.35
MSH5-215ENST00000482280 ZNF236Q9UL36 1845 aa23.49■■□□□ 1.35
MSH5-215ENST00000482280 RLFQ13129 1914 aa23.49■■□□□ 1.35
MSH5-215ENST00000482280 ZNF213O14771 459 aa23.49■■□□□ 1.35
MSH5-215ENST00000482280 MCCP23508 829 aa23.49■■□□□ 1.35
MSH5-215ENST00000482280 MAML3Q96JK9 1138 aa23.49■■□□□ 1.35
MSH5-215ENST00000482280 INCENPQ9NQS7 918 aa23.49■■□□□ 1.35
MSH5-215ENST00000482280 FBXO40Q9UH90 709 aa23.49■■□□□ 1.35
MSH5-215ENST00000482280 BRCA2P51587 3418 aa23.49■■□□□ 1.35
MSH5-215ENST00000482280 PGK2P07205 417 aa23.48■■□□□ 1.35
MSH5-215ENST00000482280 OAZ1P54368 228 aa23.48■■□□□ 1.35
MSH5-215ENST00000482280 CCDC96Q2M329 555 aa23.48■■□□□ 1.35
MSH5-215ENST00000482280 AKNAD1Q5T1N1 836 aa23.48■■□□□ 1.35
MSH5-215ENST00000482280 LHX8Q68G74 356 aa23.48■■□□□ 1.35
MSH5-215ENST00000482280 REPS2Q8NFH8 660 aa23.48■■□□□ 1.35
MSH5-215ENST00000482280 STAG1Q8WVM7 1258 aa23.48■■□□□ 1.35
MSH5-215ENST00000482280 CHMP4CQ96CF2 233 aa23.48■■□□□ 1.35
MSH5-215ENST00000482280 SLC38A10Q9HBR0 1119 aa23.48■■□□□ 1.35
MSH5-215ENST00000482280 RAVER2Q9HCJ3 691 aaKnown RBP23.48■■□□□ 1.35
MSH5-215ENST00000482280 DIS3Q9Y2L1 958 aaKnown RBP23.48■■□□□ 1.35
MSH5-215ENST00000482280 MYH4Q9Y623 1939 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 ATP2A1O14983 1001 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 NMT2O60551 498 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 CYBAP13498 195 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 HABP4Q5JVS0 413 aaKnown RBP23.47■■□□□ 1.35
MSH5-215ENST00000482280 ANKRD35Q8N283 1001 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 ARRDC4Q8NCT1 418 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 ESR2Q92731 530 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 IL17RBQ9NRM6 502 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 CTNNA3Q9UI47 895 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 CNPY2Q9Y2B0 182 aa23.47■■□□□ 1.35
MSH5-215ENST00000482280 MYCNP04198 464 aaPredicted RBP23.46■■□□□ 1.35
MSH5-215ENST00000482280 FGRP09769 529 aa23.46■■□□□ 1.35
MSH5-215ENST00000482280 RCSD1Q6JBY9 416 aa23.46■■□□□ 1.35
MSH5-215ENST00000482280 C7orf61Q8IZ16 206 aa23.46■■□□□ 1.35
MSH5-215ENST00000482280 CHST13Q8NET6 341 aa23.46■■□□□ 1.35
MSH5-215ENST00000482280 NRBP1Q9UHY1 535 aa23.46■■□□□ 1.35
MSH5-215ENST00000482280 SEPT4O43236 478 aa23.45■■□□□ 1.34
MSH5-215ENST00000482280 TOP1P11387 765 aaKnown RBP23.45■■□□□ 1.34
MSH5-215ENST00000482280 NT5C2P49902 561 aa23.45■■□□□ 1.34
MSH5-215ENST00000482280 IMMTQ16891 758 aaKnown RBP23.45■■□□□ 1.34
MSH5-215ENST00000482280 CHRDL2Q6WN34 429 aa23.45■■□□□ 1.34
MSH5-215ENST00000482280 KCTD1Q719H9 257 aa23.45■■□□□ 1.34
MSH5-215ENST00000482280 DCAF4Q8WV16 495 aa23.45■■□□□ 1.34
MSH5-215ENST00000482280 TINF2Q9BSI4 451 aa23.45■■□□□ 1.34
MSH5-215ENST00000482280 COLQQ9Y215 455 aaPredicted RBP23.45■■□□□ 1.34
MSH5-215ENST00000482280 PARP14Q460N5 1801 aa23.45■■□□□ 1.34
MSH5-215ENST00000482280 MKI67P46013 3256 aaKnown RBP23.44■■□□□ 1.34
MSH5-215ENST00000482280 KBTBD13C9JR72 458 aa23.44■■□□□ 1.34
MSH5-215ENST00000482280 RUFY2Q8WXA3 655 aa23.44■■□□□ 1.34
MSH5-215ENST00000482280 HOMER2Q9NSB8 354 aa23.44■■□□□ 1.34
MSH5-215ENST00000482280 TCP11L1Q9NUJ3 509 aa23.44■■□□□ 1.34
MSH5-215ENST00000482280 COL11A1P12107 1806 aaPredicted RBP23.43■■□□□ 1.34
MSH5-215ENST00000482280 DNM1LO00429 736 aa23.43■■□□□ 1.34
MSH5-215ENST00000482280 PLA2G6O60733 806 aa23.43■■□□□ 1.34
MSH5-215ENST00000482280 ZNF792Q3KQV3 632 aa23.43■■□□□ 1.34
MSH5-215ENST00000482280 CCDC178Q5BJE1 867 aa23.43■■□□□ 1.34
MSH5-215ENST00000482280 TTC22Q5TAA0 569 aa23.43■■□□□ 1.34
MSH5-215ENST00000482280 IQCA1Q86XH1 822 aa23.43■■□□□ 1.34
MSH5-215ENST00000482280 MSL3Q8N5Y2 521 aaKnown RBP23.43■■□□□ 1.34
MSH5-215ENST00000482280 TRPV1Q8NER1 839 aa23.43■■□□□ 1.34
MSH5-215ENST00000482280 DSCC1Q9BVC3 393 aa23.43■■□□□ 1.34
MSH5-215ENST00000482280 RIPK3Q9Y572 518 aa23.43■■□□□ 1.34
MSH5-215ENST00000482280 SLC34A2O95436 690 aa23.42■■□□□ 1.34
MSH5-215ENST00000482280 RARBP10826 455 aa23.42■■□□□ 1.34
MSH5-215ENST00000482280 PRAMEF19Q5SWL8 479 aa23.42■■□□□ 1.34
MSH5-215ENST00000482280 TTC14Q96N46 770 aa23.42■■□□□ 1.34
MSH5-215ENST00000482280 SENP6Q9GZR1 1112 aaPredicted RBP23.42■■□□□ 1.34
MSH5-215ENST00000482280 ACAD9Q9H845 621 aa23.42■■□□□ 1.34
MSH5-215ENST00000482280 MNX1P50219 401 aaPredicted RBP23.41■■□□□ 1.34
MSH5-215ENST00000482280 TKFCQ3LXA3 575 aa23.41■■□□□ 1.34
MSH5-215ENST00000482280 ANO1Q5XXA6 986 aa23.41■■□□□ 1.34
MSH5-215ENST00000482280 CCDC174Q6PII3 467 aa23.41■■□□□ 1.34
MSH5-215ENST00000482280 TMEM47Q9BQJ4 181 aa23.41■■□□□ 1.34
MSH5-215ENST00000482280 IGHA2P01877 340 aa23.4■■□□□ 1.34
MSH5-215ENST00000482280 ALAS1P13196 640 aa23.4■■□□□ 1.34
MSH5-215ENST00000482280 TBC1D10CQ8IV04 446 aa23.4■■□□□ 1.34
MSH5-215ENST00000482280 RNF146Q9NTX7 359 aa23.4■■□□□ 1.34
MSH5-215ENST00000482280 PRR12Q9ULL5 1215 aa23.4■■□□□ 1.34
MSH5-215ENST00000482280 TACC3Q9Y6A5 838 aa23.4■■□□□ 1.34
MSH5-215ENST00000482280 PFASO15067 1338 aa23.39■■□□□ 1.34
MSH5-215ENST00000482280 SYNGAP1Q96PV0 1343 aa23.39■■□□□ 1.34
MSH5-215ENST00000482280 COL6A1P12109 1028 aa23.39■■□□□ 1.33
MSH5-215ENST00000482280 AKR1A1P14550 325 aa23.39■■□□□ 1.33
MSH5-215ENST00000482280 PDE4AP27815 886 aa23.39■■□□□ 1.33
MSH5-215ENST00000482280 NOVP48745 357 aa23.39■■□□□ 1.33
MSH5-215ENST00000482280 GJC2Q5T442 439 aaPredicted RBP23.39■■□□□ 1.33
MSH5-215ENST00000482280 KRT23Q9C075 422 aa23.39■■□□□ 1.33
MSH5-215ENST00000482280 CNNM2Q9H8M5 875 aa23.39■■□□□ 1.33
MSH5-215ENST00000482280 RAD50Q92878 1312 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms