RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 RIPK3Q9Y572 518 aa11.56□□□□□ -0.56
TMEM39A-207ENST00000482162 ALPK3Q96L96 1907 aa11.56□□□□□ -0.56
TMEM39A-207ENST00000482162 ZMYM6O95789 1325 aa11.56□□□□□ -0.56
TMEM39A-207ENST00000482162 RANBP2P49792 3224 aaKnown RBP11.56□□□□□ -0.56
TMEM39A-207ENST00000482162 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 A0A0D9SFI3 127 aa11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 A0A1W2PPC1 479 aa11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 SEPT4O43236 478 aa11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 CENPBP07199 599 aaPredicted RBP11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 FDX1P10109 184 aa11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 BMP8BP34820 402 aa11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 MSL3Q8N5Y2 521 aaKnown RBP11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 MMP19Q99542 508 aa11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 GDF15Q99988 308 aa11.55□□□□□ -0.56
TMEM39A-207ENST00000482162 DNM1LO00429 736 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 TSPY3P0CV98 308 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 TSPY8P0CW00 308 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 HSPD1P10809 573 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 BMP3P12645 472 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 KCTD2Q14681 263 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 SLFN13Q68D06 897 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 MAMDC4Q6UXC1 1216 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 ZNF467Q7Z7K2 595 aaPredicted RBP11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 ZNF589Q86UQ0 364 aaPredicted RBP11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 TINF2Q9BSI4 451 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 TCP11L1Q9NUJ3 509 aa11.54□□□□□ -0.56
TMEM39A-207ENST00000482162 COL11A1P12107 1806 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 ZBED4O75132 1171 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 PGK2P07205 417 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 PCP11498 1178 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 SDSP20132 328 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 LRRC26Q2I0M4 334 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 PRAMEF19Q5SWL8 479 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 RCSD1Q6JBY9 416 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 LRRC47Q8N1G4 583 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 ARRDC4Q8NCT1 418 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 SMCHD1A6NHR9 2005 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 ZNF536O15090 1300 aa11.53□□□□□ -0.56
TMEM39A-207ENST00000482162 NMT2O60551 498 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 SNAI1O95863 264 aaPredicted RBP11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 ZNF865P0CJ78 1059 aaPredicted RBP11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 SNX17Q15036 470 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 C1orf53Q5VUE5 145 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 SNRNP48Q6IEG0 339 aaKnown RBP11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 B4GALNT3Q6L9W6 998 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 C7orf61Q8IZ16 206 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 CHST13Q8NET6 341 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 CHURC1Q8WUH1 139 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 FGD4Q96M96 766 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 CCDC171Q6TFL3 1326 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 MYH4Q9Y623 1939 aa11.52□□□□□ -0.57
TMEM39A-207ENST00000482162 TSPY2A6NKD2 308 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 TMEM232C9JQI7 657 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 RAD21O60216 631 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 TAL1P17542 331 aaPredicted RBP11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 MCCP23508 829 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 CNGA1P29973 690 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 SLC1A4P43007 532 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 NT5C2P49902 561 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 BTNL9Q6UXG8 535 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 KIFC2Q96AC6 838 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 TTC14Q96N46 770 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 RAVER2Q9HCJ3 691 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 FBXO40Q9UH90 709 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 SUPT16HQ9Y5B9 1047 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 SYNGAP1Q96PV0 1343 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 FRMPD3Q5JV73 1810 aa11.51□□□□□ -0.57
TMEM39A-207ENST00000482162 RANBP6O60518 1105 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 TOP1P11387 765 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 STAT2P52630 851 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 NKX3-2P78367 333 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 LRRC41Q15345 812 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 AKNAD1Q5T1N1 836 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 FAM133AQ8N9E0 248 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 DCAF4Q8WV16 495 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 ANKS1AQ92625 1134 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 TMEM47Q9BQJ4 181 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 SENP6Q9GZR1 1112 aaPredicted RBP11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 STX8Q9UNK0 236 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 PHF24Q9UPV7 400 aa11.5□□□□□ -0.57
TMEM39A-207ENST00000482162 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 SNHG28P0DPA3 235 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 PDE4AP27815 886 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 MAGEA10P43363 369 aaPredicted RBP11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 MFAP1P55081 439 aaKnown RBP11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 TKFCQ3LXA3 575 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 CCSAPQ6IQ19 270 aaPredicted RBP11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 SLC39A5Q6ZMH5 540 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 TBC1D10CQ8IV04 446 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 KLHDC9Q8NEP7 349 aa11.49□□□□□ -0.57
TMEM39A-207ENST00000482162 RILPL2Q969X0 211 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms