RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 NBPF3Q9H094 633 aa17.48■□□□□ 0.39
OPTN-210ENST00000482140 TCP11L1Q9NUJ3 509 aa17.48■□□□□ 0.39
OPTN-210ENST00000482140 BRCA2P51587 3418 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 HOXC6P09630 235 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 TOP1P11387 765 aaKnown RBP17.47■□□□□ 0.39
OPTN-210ENST00000482140 SLC4A3P48751 1232 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 CACNB2Q08289 660 aaPredicted RBP17.47■□□□□ 0.39
OPTN-210ENST00000482140 CCDC96Q2M329 555 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 MAP3K21Q5TCX8 1036 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 SNRNP48Q6IEG0 339 aaKnown RBP17.47■□□□□ 0.39
OPTN-210ENST00000482140 FAM160B2Q86V87 743 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 ABRAQ8N0Z2 381 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 CPXCR1Q8N123 301 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 REPS2Q8NFH8 660 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 NPLOC4Q8TAT6 608 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 CHURC1Q8WUH1 139 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 MMP19Q99542 508 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
OPTN-210ENST00000482140 NEDD4P46934 1319 aa17.47■□□□□ 0.39
OPTN-210ENST00000482140 FARP2O94887 1054 aaPredicted RBP17.46■□□□□ 0.39
OPTN-210ENST00000482140 NEFLP07196 543 aa17.46■□□□□ 0.39
OPTN-210ENST00000482140 FDX1P10109 184 aa17.46■□□□□ 0.39
OPTN-210ENST00000482140 NT5C2P49902 561 aa17.46■□□□□ 0.39
OPTN-210ENST00000482140 KCTD2Q14681 263 aa17.46■□□□□ 0.39
OPTN-210ENST00000482140 KCTD1Q719H9 257 aa17.46■□□□□ 0.39
OPTN-210ENST00000482140 IL25Q9H293 177 aa17.46■□□□□ 0.39
OPTN-210ENST00000482140 NOVP48745 357 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 CCDC178Q5BJE1 867 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 RCSD1Q6JBY9 416 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 IQCA1Q86XH1 822 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 DCAF4Q8WV16 495 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 TTC14Q96N46 770 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 TMEM47Q9BQJ4 181 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 SLC38A10Q9HBR0 1119 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 RAVER2Q9HCJ3 691 aaKnown RBP17.45■□□□□ 0.38
OPTN-210ENST00000482140 FLRT1Q9NZU1 646 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 PLXNA1Q9UIW2 1896 aa17.45■□□□□ 0.38
OPTN-210ENST00000482140 COBLO75128 1261 aa17.44■□□□□ 0.38
OPTN-210ENST00000482140 KDM4AO75164 1064 aa17.44■□□□□ 0.38
OPTN-210ENST00000482140 CCND3P30281 292 aaPredicted RBP17.44■□□□□ 0.38
OPTN-210ENST00000482140 OLFML2BQ68BL8 750 aa17.44■□□□□ 0.38
OPTN-210ENST00000482140 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
OPTN-210ENST00000482140 ZKSCAN3Q9BRR0 538 aa17.44■□□□□ 0.38
OPTN-210ENST00000482140 KRT23Q9C075 422 aa17.44■□□□□ 0.38
OPTN-210ENST00000482140 CRISPLD2Q9H0B8 497 aa17.44■□□□□ 0.38
OPTN-210ENST00000482140 CNNM2Q9H8M5 875 aa17.44■□□□□ 0.38
OPTN-210ENST00000482140 TNRC18O15417 2968 aaPredicted RBP17.44■□□□□ 0.38
OPTN-210ENST00000482140 B4E1Z4 1266 aa17.43■□□□□ 0.38
OPTN-210ENST00000482140 ATP2A1O14983 1001 aa17.43■□□□□ 0.38
OPTN-210ENST00000482140 PLA2G6O60733 806 aa17.43■□□□□ 0.38
OPTN-210ENST00000482140 CNGA1P29973 690 aa17.43■□□□□ 0.38
OPTN-210ENST00000482140 CYP2C19P33261 490 aa17.43■□□□□ 0.38
OPTN-210ENST00000482140 OAZ1P54368 228 aa17.43■□□□□ 0.38
OPTN-210ENST00000482140 PRPF38BQ5VTL8 546 aaKnown RBP17.43■□□□□ 0.38
OPTN-210ENST00000482140 HTATIP2Q9BUP3 242 aa17.43■□□□□ 0.38
OPTN-210ENST00000482140 SGSM2O43147 1006 aa17.42■□□□□ 0.38
OPTN-210ENST00000482140 PGK2P07205 417 aa17.42■□□□□ 0.38
OPTN-210ENST00000482140 RASGRP2Q7LDG7 609 aa17.42■□□□□ 0.38
OPTN-210ENST00000482140 ANKLE1Q8NAG6 615 aa17.42■□□□□ 0.38
OPTN-210ENST00000482140 DDX11Q96FC9 970 aa17.42■□□□□ 0.38
OPTN-210ENST00000482140 MAML3Q96JK9 1138 aa17.42■□□□□ 0.38
OPTN-210ENST00000482140 FBXO40Q9UH90 709 aa17.42■□□□□ 0.38
OPTN-210ENST00000482140 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
OPTN-210ENST00000482140 PTH1RQ03431 593 aa17.41■□□□□ 0.38
OPTN-210ENST00000482140 TRDNQ13061 729 aa17.41■□□□□ 0.38
OPTN-210ENST00000482140 KIAA1211Q6ZU35 1233 aa17.41■□□□□ 0.38
OPTN-210ENST00000482140 DGKHQ86XP1 1220 aa17.41■□□□□ 0.38
OPTN-210ENST00000482140 CHST13Q8NET6 341 aa17.41■□□□□ 0.38
OPTN-210ENST00000482140 GPCPD1Q9NPB8 672 aa17.41■□□□□ 0.38
OPTN-210ENST00000482140 PRR12Q9ULL5 1215 aa17.41■□□□□ 0.38
OPTN-210ENST00000482140 RIPK3Q9Y572 518 aa17.41■□□□□ 0.38
OPTN-210ENST00000482140 FRMPD2Q68DX3 1309 aaPredicted RBP17.41■□□□□ 0.38
OPTN-210ENST00000482140 FRMPD3Q5JV73 1810 aa17.4■□□□□ 0.38
OPTN-210ENST00000482140 MSCO60682 206 aa17.4■□□□□ 0.38
OPTN-210ENST00000482140 CCDC174Q6PII3 467 aa17.4■□□□□ 0.38
OPTN-210ENST00000482140 ANKRD35Q8N283 1001 aa17.4■□□□□ 0.38
OPTN-210ENST00000482140 DPF3Q92784 378 aa17.4■□□□□ 0.38
OPTN-210ENST00000482140 ZSCAN10Q96SZ4 725 aaPredicted RBP17.4■□□□□ 0.38
OPTN-210ENST00000482140 UBAC1Q9BSL1 405 aa17.4■□□□□ 0.38
OPTN-210ENST00000482140 KAT14Q9H8E8 782 aa17.4■□□□□ 0.38
OPTN-210ENST00000482140 HOMER2Q9NSB8 354 aa17.4■□□□□ 0.38
OPTN-210ENST00000482140 OGDHLQ9ULD0 1010 aa17.4■□□□□ 0.38
OPTN-210ENST00000482140 DIS3Q9Y2L1 958 aaKnown RBP17.4■□□□□ 0.38
OPTN-210ENST00000482140 PDHBP11177 359 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 CYBAP13498 195 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 ZNF792Q3KQV3 632 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 SYDE2Q5VT97 1194 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 TTBK2Q6IQ55 1244 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 NECAB2Q7Z6G3 386 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 UBE2Q1Q7Z7E8 422 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 SKAP1Q86WV1 359 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 PAWRQ96IZ0 340 aaKnown RBP17.39■□□□□ 0.37
OPTN-210ENST00000482140 ACAD9Q9H845 621 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 ZSWIM5Q9P217 1185 aa17.39■□□□□ 0.37
OPTN-210ENST00000482140 DDX20Q9UHI6 824 aaKnown RBP17.39■□□□□ 0.37
OPTN-210ENST00000482140 MKI67P46013 3256 aaKnown RBP17.38■□□□□ 0.37
OPTN-210ENST00000482140 ALAS1P13196 640 aa17.38■□□□□ 0.37
OPTN-210ENST00000482140 SLC16A2P36021 539 aa17.38■□□□□ 0.37
OPTN-210ENST00000482140 SNAP25P60880 206 aa17.38■□□□□ 0.37
OPTN-210ENST00000482140 TKFCQ3LXA3 575 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms