RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 OSBPP22059 807 aa22.62■■□□□ 1.21
SEMA4D-218ENST00000482128 SYDE2Q5VT97 1194 aa22.62■■□□□ 1.21
SEMA4D-218ENST00000482128 TTBK2Q6IQ55 1244 aa22.62■■□□□ 1.21
SEMA4D-218ENST00000482128 REM2Q8IYK8 340 aaPredicted RBP22.62■■□□□ 1.21
SEMA4D-218ENST00000482128 SPZ1Q9BXG8 430 aa22.62■■□□□ 1.21
SEMA4D-218ENST00000482128 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.62■■□□□ 1.21
SEMA4D-218ENST00000482128 PTPRFP10586 1907 aa22.62■■□□□ 1.21
SEMA4D-218ENST00000482128 MYPNQ86TC9 1320 aa22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 HSP90AA1P07900 732 aaKnown RBP22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 AKAP17AQ02040 695 aaKnown RBP22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 OTUD7BQ6GQQ9 843 aa22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 GPAT2Q6NUI2 795 aa22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 TRIM22Q8IYM9 498 aa22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 SRBD1Q8N5C6 995 aaKnown RBP22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 PRPF38AQ8NAV1 312 aaKnown RBP22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 UBA5Q9GZZ9 404 aa22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 ZCCHC17Q9NP64 241 aaKnown RBP22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 RBM27Q9P2N5 1060 aaKnown RBP22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 PPP1R9AQ9ULJ8 1098 aa22.61■■□□□ 1.21
SEMA4D-218ENST00000482128 SLC16A2P36021 539 aa22.6■■□□□ 1.21
SEMA4D-218ENST00000482128 CUL4AQ13619 759 aa22.6■■□□□ 1.21
SEMA4D-218ENST00000482128 COG2Q14746 738 aa22.6■■□□□ 1.21
SEMA4D-218ENST00000482128 KIFC2Q96AC6 838 aa22.6■■□□□ 1.21
SEMA4D-218ENST00000482128 HOXC10Q9NYD6 342 aa22.6■■□□□ 1.21
SEMA4D-218ENST00000482128 DAXXQ9UER7 740 aaPredicted RBP22.6■■□□□ 1.21
SEMA4D-218ENST00000482128 WDR33Q9C0J8 1336 aaKnown RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 BTBD19C9JJ37 291 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 PDHXO00330 501 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 FDX1P10109 184 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 KIF23Q02241 960 aaPredicted RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 SSRP1Q08945 709 aaKnown RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 ST3GAL1Q11201 340 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 NTRK3Q16288 839 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 SAMD1Q6SPF0 538 aaPredicted RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 ADGRF4Q8IZF3 695 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 CMTR1Q8N1G2 835 aaKnown RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 CCDC82Q8N4S0 544 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 RRP36Q96EU6 259 aaKnown RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 INTS4Q96HW7 963 aaKnown RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 RNF26Q9BY78 433 aaPredicted RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 RIOX1Q9H6W3 641 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 FBXO28Q9NVF7 368 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 SEC63Q9UGP8 760 aaKnown RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 PRR12Q9ULL5 1215 aa22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 CTDP1Q9Y5B0 961 aaPredicted RBP22.59■■□□□ 1.21
SEMA4D-218ENST00000482128 CNTNAP5Q8WYK1 1306 aa22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 DSG3P32926 999 aa22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 HMGN5P82970 282 aaKnown RBP22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 NSUN7Q8NE18 718 aaKnown RBP22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 GTF3C2Q8WUA4 911 aaPredicted RBP22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 PARK7Q99497 189 aaKnown RBP22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 SLC26A6Q9BXS9 759 aa22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 ASCC2Q9H1I8 757 aaPredicted RBP22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 CPVLQ9H3G5 476 aa22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 VAT1LQ9HCJ6 419 aa22.58■■□□□ 1.21
SEMA4D-218ENST00000482128 PTPDC1A2A3K4 754 aa22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 ZBED4O75132 1171 aa22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 FMNL1O95466 1100 aaPredicted RBP22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 HTRA3P83110 453 aa22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 FUT2Q10981 343 aa22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 NBPF11Q86T75 865 aa22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 FAM43AQ8N2R8 423 aa22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 PHKBQ93100 1093 aa22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 JMJD4Q9H9V9 463 aa22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 STK36Q9NRP7 1315 aa22.57■■□□□ 1.2
SEMA4D-218ENST00000482128 PRPF3O43395 683 aaKnown RBP22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 CYTH3O43739 400 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 CTDNEP1O95476 244 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 MAP2K2P36507 400 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 TM4SF4P48230 202 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 VEGFBP49765 207 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 IFNL1Q8IU54 200 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 MB21D1Q8N884 522 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 WASF1Q92558 559 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 PTPN18Q99952 460 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 PNMA2Q9UL42 364 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 SMC3Q9UQE7 1217 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 KIF3AQ9Y496 699 aa22.56■■□□□ 1.2
SEMA4D-218ENST00000482128 SPDYE16A6NNV3 312 aaPredicted RBP22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 ZBTB5O15062 677 aa22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 AOC2O75106 756 aa22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 DEXIO95424 95 aa22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 TRAF1Q13077 416 aa22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 CDC37Q16543 378 aaPredicted RBP22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 LBX2Q6XYB7 198 aa22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 HOMER1Q86YM7 354 aa22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 SMCR8Q8TEV9 937 aaPredicted RBP22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 ATG4CQ96DT6 458 aa22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 MTMR8Q96EF0 704 aa22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 RANBP17Q9H2T7 1088 aaKnown RBP22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 V9GY48 417 aaPredicted RBP22.55■■□□□ 1.2
SEMA4D-218ENST00000482128 PNMA6FA0A0J9YX94 578 aa22.54■■□□□ 1.2
SEMA4D-218ENST00000482128 IGF2BP3O00425 579 aaKnown RBP eCLIP22.54■■□□□ 1.2
SEMA4D-218ENST00000482128 VWA5AO00534 786 aa22.54■■□□□ 1.2
SEMA4D-218ENST00000482128 JAK2O60674 1132 aa22.54■■□□□ 1.2
SEMA4D-218ENST00000482128 ALDH1A1P00352 501 aa22.54■■□□□ 1.2
SEMA4D-218ENST00000482128 HERVK_113P62684 666 aa22.54■■□□□ 1.2
SEMA4D-218ENST00000482128 SLC35G1Q2M3R5 365 aa22.54■■□□□ 1.2
SEMA4D-218ENST00000482128 FAM184AQ8NB25 1140 aa22.54■■□□□ 1.2
SEMA4D-218ENST00000482128 SMARCC2Q8TAQ2 1214 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms