RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 ADAMTS5Q9UNA0 930 aa20.36■□□□□ 0.85
DDR1-243ENST00000482050 CCDC69A6NI79 296 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
DDR1-243ENST00000482050 ZBED4O75132 1171 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 HMGB1P09429 215 aaKnown RBP20.35■□□□□ 0.85
DDR1-243ENST00000482050 SLC4A3P48751 1232 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 BLOC1S2Q6QNY1 142 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 CATIPQ7Z7H3 387 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 CPXCR1Q8N123 301 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 REPS2Q8NFH8 660 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 NUP133Q8WUM0 1156 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 MOV10L1Q9BXT6 1211 aaKnown RBP20.35■□□□□ 0.85
DDR1-243ENST00000482050 SPATC1LQ9H0A9 340 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 CWC22Q9HCG8 908 aaKnown RBP20.35■□□□□ 0.85
DDR1-243ENST00000482050 PRR12Q9ULL5 1215 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 A0A0G2JMZ2 1700 aa20.35■□□□□ 0.85
DDR1-243ENST00000482050 PARP1P09874 1014 aaKnown RBP20.34■□□□□ 0.85
DDR1-243ENST00000482050 PSMA5P28066 241 aa20.34■□□□□ 0.85
DDR1-243ENST00000482050 CCNA1P78396 465 aa20.34■□□□□ 0.85
DDR1-243ENST00000482050 FGD1P98174 961 aa20.34■□□□□ 0.85
DDR1-243ENST00000482050 ARHGEF6Q15052 776 aa20.34■□□□□ 0.85
DDR1-243ENST00000482050 GPATCH4Q5T3I0 446 aaKnown RBP20.34■□□□□ 0.85
DDR1-243ENST00000482050 SYDE2Q5VT97 1194 aa20.34■□□□□ 0.85
DDR1-243ENST00000482050 RAB11FIP4Q86YS3 637 aa20.34■□□□□ 0.85
DDR1-243ENST00000482050 ZNF654Q8IZM8 581 aa20.34■□□□□ 0.85
DDR1-243ENST00000482050 MTA3Q9BTC8 594 aa20.34■□□□□ 0.85
DDR1-243ENST00000482050 UBA5Q9GZZ9 404 aa20.34■□□□□ 0.85
DDR1-243ENST00000482050 RAVER2Q9HCJ3 691 aaKnown RBP20.34■□□□□ 0.85
DDR1-243ENST00000482050 COL11A1P12107 1806 aaPredicted RBP20.33■□□□□ 0.85
DDR1-243ENST00000482050 RPS6KB1P23443 525 aa20.33■□□□□ 0.85
DDR1-243ENST00000482050 ASPRV1Q53RT3 343 aa20.33■□□□□ 0.85
DDR1-243ENST00000482050 CCDC174Q6PII3 467 aa20.33■□□□□ 0.85
DDR1-243ENST00000482050 STAG2Q8N3U4 1231 aa20.33■□□□□ 0.85
DDR1-243ENST00000482050 UPF3BQ9BZI7 483 aaKnown RBP20.33■□□□□ 0.85
DDR1-243ENST00000482050 MCOLN1Q9GZU1 580 aa20.33■□□□□ 0.85
DDR1-243ENST00000482050 SLC38A10Q9HBR0 1119 aa20.33■□□□□ 0.85
DDR1-243ENST00000482050 GABRQQ9UN88 632 aa20.33■□□□□ 0.85
DDR1-243ENST00000482050 WDR19Q8NEZ3 1342 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 PLA2G6O60733 806 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 ERCC3P19447 782 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 RXRAP19793 462 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 MAPK4P31152 587 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 STAT3P40763 770 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 LIFRP42702 1097 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 PRKCZQ05513 592 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 TROAPQ12815 778 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 SNRNP48Q6IEG0 339 aaKnown RBP20.32■□□□□ 0.84
DDR1-243ENST00000482050 BTNL9Q6UXG8 535 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 NCAPG2Q86XI2 1143 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 TMTC2Q8N394 836 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 COA7Q96BR5 231 aa20.32■□□□□ 0.84
DDR1-243ENST00000482050 ZNF214Q9UL59 606 aaPredicted RBP20.32■□□□□ 0.84
DDR1-243ENST00000482050 MGAMO43451 1857 aa20.31■□□□□ 0.84
DDR1-243ENST00000482050 DHX16O60231 1041 aaKnown RBP20.31■□□□□ 0.84
DDR1-243ENST00000482050 TAL1P17542 331 aaPredicted RBP20.31■□□□□ 0.84
DDR1-243ENST00000482050 GRM4Q14833 912 aa20.31■□□□□ 0.84
DDR1-243ENST00000482050 Q6ZUG5 572 aa20.31■□□□□ 0.84
DDR1-243ENST00000482050 GPR142Q7Z601 462 aa20.31■□□□□ 0.84
DDR1-243ENST00000482050 CCDC144CPQ8IYA2 1237 aa20.31■□□□□ 0.84
DDR1-243ENST00000482050 SRRDQ9UH36 339 aa20.31■□□□□ 0.84
DDR1-243ENST00000482050 MAD2L2Q9UI95 211 aa20.31■□□□□ 0.84
DDR1-243ENST00000482050 NAP1L2Q9ULW6 460 aaPredicted RBP20.31■□□□□ 0.84
DDR1-243ENST00000482050 SLC12A7Q9Y666 1083 aa20.31■□□□□ 0.84
DDR1-243ENST00000482050 DDAH1O94760 285 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 HOXD10P28358 340 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 RUFY3Q7L099 469 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 PLEKHH3Q7Z736 793 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 RIOX2Q8IUF8 465 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 AGBL1Q96MI9 1066 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 TEX13BQ9BXU2 312 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 ZSWIM6Q9HCJ5 1215 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 VAT1LQ9HCJ6 419 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 BRPF3Q9ULD4 1205 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 PTPN22Q9Y2R2 807 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 RIPK3Q9Y572 518 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 CYP46A1Q9Y6A2 500 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 PTCH2Q9Y6C5 1203 aa20.3■□□□□ 0.84
DDR1-243ENST00000482050 PALM3A6NDB9 673 aaPredicted RBP20.29■□□□□ 0.84
DDR1-243ENST00000482050 KLRF2D3W0D1 207 aa20.29■□□□□ 0.84
DDR1-243ENST00000482050 GNRH1P01148 92 aa20.29■□□□□ 0.84
DDR1-243ENST00000482050 FLT3LGP49771 235 aa20.29■□□□□ 0.84
DDR1-243ENST00000482050 MICU3Q86XE3 530 aa20.29■□□□□ 0.84
DDR1-243ENST00000482050 ADGRF4Q8IZF3 695 aa20.29■□□□□ 0.84
DDR1-243ENST00000482050 TNS4Q8IZW8 715 aa20.29■□□□□ 0.84
DDR1-243ENST00000482050 BRF1Q92994 677 aa20.29■□□□□ 0.84
DDR1-243ENST00000482050 RANBP17Q9H2T7 1088 aaKnown RBP20.29■□□□□ 0.84
DDR1-243ENST00000482050 HOMER2Q9NSB8 354 aa20.29■□□□□ 0.84
DDR1-243ENST00000482050 IVNS1ABPQ9Y6Y0 642 aa20.29■□□□□ 0.84
DDR1-243ENST00000482050 ZNF536O15090 1300 aa20.28■□□□□ 0.84
DDR1-243ENST00000482050 KLF18A0A0U1RQI7 1052 aa20.28■□□□□ 0.84
DDR1-243ENST00000482050 SLC25A27O95847 323 aa20.28■□□□□ 0.84
DDR1-243ENST00000482050 FDX1P10109 184 aa20.28■□□□□ 0.84
DDR1-243ENST00000482050 ANAPC15P60006 121 aa20.28■□□□□ 0.84
DDR1-243ENST00000482050 APOBRQ0VD83 1088 aa20.28■□□□□ 0.84
DDR1-243ENST00000482050 PKN2Q16513 984 aaKnown RBP20.28■□□□□ 0.84
DDR1-243ENST00000482050 FBXO46Q6PJ61 603 aaPredicted RBP20.28■□□□□ 0.84
DDR1-243ENST00000482050 APOA5Q6Q788 366 aa20.28■□□□□ 0.84
DDR1-243ENST00000482050 SYNE3Q6ZMZ3 975 aa20.28■□□□□ 0.84
DDR1-243ENST00000482050 SGMS1Q86VZ5 419 aa20.28■□□□□ 0.84
DDR1-243ENST00000482050 SHCBP1Q8NEM2 672 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms