RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 LARGE1O95461 756 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 PPP2R5BQ15173 497 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 RTN1Q16799 776 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 ASPRV1Q53RT3 343 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 TREML2Q5T2D2 321 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 GPATCH4Q5T3I0 446 aaKnown RBP13.47□□□□□ -0.25
HPS4-212ENST00000481910 STAG2Q8N3U4 1231 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 SNX21Q969T3 373 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 TANGO6Q9C0B7 1094 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 PALM3A6NDB9 673 aaPredicted RBP13.46□□□□□ -0.25
HPS4-212ENST00000481910 TMEM232C9JQI7 657 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 KLRF2D3W0D1 207 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 PFKFB2O60825 505 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 CDC27P30260 824 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 IKQ13123 557 aaPredicted RBP13.46□□□□□ -0.25
HPS4-212ENST00000481910 NOGQ13253 232 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 MOGSQ13724 837 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 NECAB1Q8N987 351 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 BRI3BPQ8WY22 251 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 TMX3Q96JJ7 454 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 NCOA5Q9HCD5 579 aaKnown RBP13.46□□□□□ -0.25
HPS4-212ENST00000481910 SH2B1Q9NRF2 756 aaPredicted RBP13.46□□□□□ -0.25
HPS4-212ENST00000481910 RBM28Q9NW13 759 aaKnown RBP13.46□□□□□ -0.25
HPS4-212ENST00000481910 AGTPBP1Q9UPW5 1226 aa13.46□□□□□ -0.25
HPS4-212ENST00000481910 ADD1P35611 737 aaKnown RBP13.45□□□□□ -0.26
HPS4-212ENST00000481910 ANP32AP39687 249 aaKnown RBP13.45□□□□□ -0.26
HPS4-212ENST00000481910 INHBEP58166 350 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 SCRN1Q12765 414 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 TTBK2Q6IQ55 1244 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 HSCBQ8IWL3 235 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 ZIC5Q96T25 663 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 FAM217BQ9NTX9 383 aaPredicted RBP13.45□□□□□ -0.26
HPS4-212ENST00000481910 USP17L15C9J2P7 530 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 USP17L13C9JLJ4 530 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 USP17L11C9JVI0 530 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 USP17L18D6R9N7 530 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 USP17L22D6RA61 530 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 USP17L17D6RBQ6 530 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 USP17L19D6RCP7 530 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 USP17L20D6RJB6 530 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 CPLX1O14810 134 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 DHX16O60231 1041 aaKnown RBP13.45□□□□□ -0.26
HPS4-212ENST00000481910 FLOT1O75955 427 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 SLC16A2P36021 539 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 GNAQP50148 359 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 STAT2P52630 851 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 KIF23Q02241 960 aaPredicted RBP13.45□□□□□ -0.26
HPS4-212ENST00000481910 USP17L24Q0WX57 530 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 GPAT2Q6NUI2 795 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 CATSPERGQ6ZRH7 1159 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
HPS4-212ENST00000481910 CCDC82Q8N4S0 544 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 CHURC1Q8WUH1 139 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 UBA5Q9GZZ9 404 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 FEM1BQ9UK73 627 aa13.45□□□□□ -0.26
HPS4-212ENST00000481910 WDR33Q9C0J8 1336 aaKnown RBP13.44□□□□□ -0.26
HPS4-212ENST00000481910 LOC285556D6RIA3 1793 aa13.44□□□□□ -0.26
HPS4-212ENST00000481910 TESPA1A2RU30 521 aaPredicted RBP13.44□□□□□ -0.26
HPS4-212ENST00000481910 BTBD19C9JJ37 291 aa13.44□□□□□ -0.26
HPS4-212ENST00000481910 K7ELQ4 463 aaPredicted RBP13.44□□□□□ -0.26
HPS4-212ENST00000481910 AOC2O75106 756 aa13.44□□□□□ -0.26
HPS4-212ENST00000481910 HOXA7P31268 230 aaPredicted RBP13.44□□□□□ -0.26
HPS4-212ENST00000481910 VEGFBP49765 207 aa13.44□□□□□ -0.26
HPS4-212ENST00000481910 SREBF2Q12772 1141 aa13.44□□□□□ -0.26
HPS4-212ENST00000481910 PABPC4Q13310 644 aaKnown RBP eCLIP13.44□□□□□ -0.26
HPS4-212ENST00000481910 COG2Q14746 738 aa13.44□□□□□ -0.26
HPS4-212ENST00000481910 PTPN18Q99952 460 aa13.44□□□□□ -0.26
HPS4-212ENST00000481910 CPVLQ9H3G5 476 aa13.44□□□□□ -0.26
HPS4-212ENST00000481910 FBXO28Q9NVF7 368 aa13.44□□□□□ -0.26
HPS4-212ENST00000481910 BAZ2BQ9UIF8 2168 aaKnown RBP13.43□□□□□ -0.26
HPS4-212ENST00000481910 PDHXO00330 501 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 PLEKHA8P1O95397 391 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
HPS4-212ENST00000481910 ANKRD23Q86SG2 305 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 NBPF11Q86T75 865 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 FAM160B2Q86V87 743 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 SRBD1Q8N5C6 995 aaKnown RBP13.43□□□□□ -0.26
HPS4-212ENST00000481910 PRPF38AQ8NAV1 312 aaKnown RBP13.43□□□□□ -0.26
HPS4-212ENST00000481910 GTF3C6Q969F1 213 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 KIFC2Q96AC6 838 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 TRIM44Q96DX7 344 aaPredicted RBP13.43□□□□□ -0.26
HPS4-212ENST00000481910 LZTS2Q9BRK4 669 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 HOXC10Q9NYD6 342 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 NID2Q14112 1375 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 PLA2G6O60733 806 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 OSBPP22059 807 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 OTUD7BQ6GQQ9 843 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
HPS4-212ENST00000481910 BTNL9Q6UXG8 535 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 TMTC3Q6ZXV5 915 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 SLF1Q9BQI6 1058 aa13.43□□□□□ -0.26
HPS4-212ENST00000481910 ASCC2Q9H1I8 757 aaPredicted RBP13.43□□□□□ -0.26
HPS4-212ENST00000481910 PPFIA3O75145 1194 aa13.42□□□□□ -0.26
HPS4-212ENST00000481910 SMARCA1P28370 1054 aa13.42□□□□□ -0.26
HPS4-212ENST00000481910 TM4SF4P48230 202 aa13.42□□□□□ -0.26
HPS4-212ENST00000481910 SYDE2Q5VT97 1194 aa13.42□□□□□ -0.26
HPS4-212ENST00000481910 IFNL1Q8IU54 200 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms