RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 CATSPERGQ6ZRH7 1159 aa26.82■■□□□ 1.88
SHISA4-203ENST00000481699 GTF3C6Q969F1 213 aa26.82■■□□□ 1.88
SHISA4-203ENST00000481699 KIFC2Q96AC6 838 aa26.82■■□□□ 1.88
SHISA4-203ENST00000481699 SLF1Q9BQI6 1058 aa26.82■■□□□ 1.88
SHISA4-203ENST00000481699 BTBD19C9JJ37 291 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 PDHXO00330 501 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 AOC2O75106 756 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 HOXA7P31268 230 aaPredicted RBP26.81■■□□□ 1.88
SHISA4-203ENST00000481699 ADD1P35611 737 aaKnown RBP26.81■■□□□ 1.88
SHISA4-203ENST00000481699 SLC16A2P36021 539 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 VEGFBP49765 207 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 SCRN1Q12765 414 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 SYDE2Q5VT97 1194 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 TTBK2Q6IQ55 1244 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 GPAT2Q6NUI2 795 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 TMTC3Q6ZXV5 915 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 CCDC83Q8IWF9 413 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 UBA5Q9GZZ9 404 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 SLC45A1Q9Y2W3 748 aa26.81■■□□□ 1.88
SHISA4-203ENST00000481699 LOC285556D6RIA3 1793 aa26.8■■□□□ 1.88
SHISA4-203ENST00000481699 PLA2G6O60733 806 aa26.8■■□□□ 1.88
SHISA4-203ENST00000481699 PLEKHA8P1O95397 391 aa26.8■■□□□ 1.88
SHISA4-203ENST00000481699 CDC27P30260 824 aa26.8■■□□□ 1.88
SHISA4-203ENST00000481699 COG2Q14746 738 aa26.8■■□□□ 1.88
SHISA4-203ENST00000481699 CCDC82Q8N4S0 544 aa26.8■■□□□ 1.88
SHISA4-203ENST00000481699 PRPF38AQ8NAV1 312 aaKnown RBP26.8■■□□□ 1.88
SHISA4-203ENST00000481699 HOXC10Q9NYD6 342 aa26.8■■□□□ 1.88
SHISA4-203ENST00000481699 AKAP17AQ02040 695 aaKnown RBP26.79■■□□□ 1.88
SHISA4-203ENST00000481699 ASCC2Q9H1I8 757 aaPredicted RBP26.79■■□□□ 1.88
SHISA4-203ENST00000481699 VAT1LQ9HCJ6 419 aa26.79■■□□□ 1.88
SHISA4-203ENST00000481699 FBXO28Q9NVF7 368 aa26.79■■□□□ 1.88
SHISA4-203ENST00000481699 PTPRFP10586 1907 aa26.78■■□□□ 1.88
SHISA4-203ENST00000481699 MAP2K2P36507 400 aa26.78■■□□□ 1.88
SHISA4-203ENST00000481699 BTNL9Q6UXG8 535 aa26.78■■□□□ 1.88
SHISA4-203ENST00000481699 IFNL1Q8IU54 200 aa26.78■■□□□ 1.88
SHISA4-203ENST00000481699 FAM43AQ8N2R8 423 aa26.78■■□□□ 1.88
SHISA4-203ENST00000481699 PARK7Q99497 189 aaKnown RBP26.78■■□□□ 1.88
SHISA4-203ENST00000481699 ZCCHC17Q9NP64 241 aaKnown RBP26.78■■□□□ 1.88
SHISA4-203ENST00000481699 FAM217BQ9NTX9 383 aaPredicted RBP26.78■■□□□ 1.88
SHISA4-203ENST00000481699 PPP1R9AQ9ULJ8 1098 aa26.78■■□□□ 1.88
SHISA4-203ENST00000481699 MYPNQ86TC9 1320 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 ZBED4O75132 1171 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 HSP90AA1P07900 732 aaKnown RBP26.77■■□□□ 1.88
SHISA4-203ENST00000481699 SMARCA1P28370 1054 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 TM4SF4P48230 202 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 TRIM22Q8IYM9 498 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 ADGRF4Q8IZF3 695 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 CMTR1Q8N1G2 835 aaKnown RBP26.77■■□□□ 1.88
SHISA4-203ENST00000481699 SRBD1Q8N5C6 995 aaKnown RBP26.77■■□□□ 1.88
SHISA4-203ENST00000481699 SMCR8Q8TEV9 937 aaPredicted RBP26.77■■□□□ 1.88
SHISA4-203ENST00000481699 RRP36Q96EU6 259 aaKnown RBP26.77■■□□□ 1.88
SHISA4-203ENST00000481699 PTPN18Q99952 460 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 SPZ1Q9BXG8 430 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 CPVLQ9H3G5 476 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 SEC63Q9UGP8 760 aaKnown RBP26.77■■□□□ 1.88
SHISA4-203ENST00000481699 PRR12Q9ULL5 1215 aa26.77■■□□□ 1.88
SHISA4-203ENST00000481699 DSG3P32926 999 aa26.76■■□□□ 1.87
SHISA4-203ENST00000481699 PIBF1Q8WXW3 757 aa26.76■■□□□ 1.87
SHISA4-203ENST00000481699 ZIC5Q96T25 663 aa26.76■■□□□ 1.87
SHISA4-203ENST00000481699 RBM19Q9Y4C8 960 aaKnown RBP26.76■■□□□ 1.87
SHISA4-203ENST00000481699 IGF2BP3O00425 579 aaKnown RBP eCLIP26.75■■□□□ 1.87
SHISA4-203ENST00000481699 ALDH1A1P00352 501 aa26.75■■□□□ 1.87
SHISA4-203ENST00000481699 FDX1P10109 184 aa26.75■■□□□ 1.87
SHISA4-203ENST00000481699 IFNAR1P17181 557 aa26.75■■□□□ 1.87
SHISA4-203ENST00000481699 SSRP1Q08945 709 aaKnown RBP26.75■■□□□ 1.87
SHISA4-203ENST00000481699 HOMER1Q86YM7 354 aa26.75■■□□□ 1.87
SHISA4-203ENST00000481699 GTF3C2Q8WUA4 911 aaPredicted RBP26.75■■□□□ 1.87
SHISA4-203ENST00000481699 SLC26A6Q9BXS9 759 aa26.75■■□□□ 1.87
SHISA4-203ENST00000481699 RBM27Q9P2N5 1060 aaKnown RBP26.75■■□□□ 1.87
SHISA4-203ENST00000481699 DAXXQ9UER7 740 aaPredicted RBP26.75■■□□□ 1.87
SHISA4-203ENST00000481699 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.75■■□□□ 1.87
SHISA4-203ENST00000481699 HERVK_113P62684 666 aa26.74■■□□□ 1.87
SHISA4-203ENST00000481699 TAF1CQ15572 869 aaPredicted RBP26.74■■□□□ 1.87
SHISA4-203ENST00000481699 ATG4CQ96DT6 458 aa26.74■■□□□ 1.87
SHISA4-203ENST00000481699 P2RX7Q99572 595 aaKnown RBP26.74■■□□□ 1.87
SHISA4-203ENST00000481699 LLPHQ9BRT6 129 aaKnown RBP26.74■■□□□ 1.87
SHISA4-203ENST00000481699 CYP2C8P10632 490 aa26.73■■□□□ 1.87
SHISA4-203ENST00000481699 NBPF11Q86T75 865 aa26.73■■□□□ 1.87
SHISA4-203ENST00000481699 PHKBQ93100 1093 aa26.73■■□□□ 1.87
SHISA4-203ENST00000481699 RIOX1Q9H6W3 641 aa26.73■■□□□ 1.87
SHISA4-203ENST00000481699 JMJD4Q9H9V9 463 aa26.73■■□□□ 1.87
SHISA4-203ENST00000481699 CNTNAP5Q8WYK1 1306 aa26.72■■□□□ 1.87
SHISA4-203ENST00000481699 SPDYE16A6NNV3 312 aaPredicted RBP26.72■■□□□ 1.87
SHISA4-203ENST00000481699 CDC37Q16543 378 aaPredicted RBP26.72■■□□□ 1.87
SHISA4-203ENST00000481699 MB21D1Q8N884 522 aa26.72■■□□□ 1.87
SHISA4-203ENST00000481699 RNF26Q9BY78 433 aaPredicted RBP26.72■■□□□ 1.87
SHISA4-203ENST00000481699 ZFYVE28Q9HCC9 887 aa26.72■■□□□ 1.87
SHISA4-203ENST00000481699 V9GY48 417 aaPredicted RBP26.72■■□□□ 1.87
SHISA4-203ENST00000481699 PTPDC1A2A3K4 754 aa26.71■■□□□ 1.87
SHISA4-203ENST00000481699 VWA5AO00534 786 aa26.71■■□□□ 1.87
SHISA4-203ENST00000481699 PPFIA3O75145 1194 aa26.71■■□□□ 1.87
SHISA4-203ENST00000481699 FMNL1O95466 1100 aaPredicted RBP26.71■■□□□ 1.87
SHISA4-203ENST00000481699 SNAP25P60880 206 aa26.71■■□□□ 1.87
SHISA4-203ENST00000481699 NTRK3Q16288 839 aa26.71■■□□□ 1.87
SHISA4-203ENST00000481699 CCDC174Q6PII3 467 aa26.71■■□□□ 1.87
SHISA4-203ENST00000481699 PIGSQ96S52 555 aa26.71■■□□□ 1.87
SHISA4-203ENST00000481699 PAGR1Q9BTK6 254 aa26.71■■□□□ 1.87
SHISA4-203ENST00000481699 ZBTB5O15062 677 aa26.7■■□□□ 1.86
SHISA4-203ENST00000481699 PRPF3O43395 683 aaKnown RBP26.7■■□□□ 1.86
SHISA4-203ENST00000481699 CYTH3O43739 400 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms