RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 COL25A1Q9BXS0 654 aaPredicted RBP12.47□□□□□ -0.41
SSBP1-210ENST00000481508 SENP2Q9HC62 589 aa12.47□□□□□ -0.41
SSBP1-210ENST00000481508 MORF4L1Q9UBU8 362 aa12.47□□□□□ -0.41
SSBP1-210ENST00000481508 TTC28Q96AY4 2481 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 TNKSO95271 1327 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 MCCP23508 829 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 PSMC4P43686 418 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 GCLCP48506 637 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-210ENST00000481508 SEC23AQ15436 765 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 CASC1Q6TDU7 716 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 LBX2Q6XYB7 198 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 MB21D2Q8IYB1 491 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-210ENST00000481508 ENAHQ8N8S7 591 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-210ENST00000481508 KRT23Q9C075 422 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 PORCNQ9H237 461 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 PRO3102Q9H379 93 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
SSBP1-210ENST00000481508 PCDHB13Q9Y5F0 798 aa12.46□□□□□ -0.41
SSBP1-210ENST00000481508 LAMA2P24043 3122 aaKnown RBP12.45□□□□□ -0.42
SSBP1-210ENST00000481508 FRMPD2Q68DX3 1309 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-210ENST00000481508 TOP1P11387 765 aaKnown RBP12.45□□□□□ -0.42
SSBP1-210ENST00000481508 ERVK-9P63128 1117 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 ERVK-24P63145 666 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 COG2Q14746 738 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 TTBK2Q6IQ55 1244 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 ZSCAN10Q96SZ4 725 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-210ENST00000481508 TMEM106CQ9BVX2 250 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 CNNM2Q9H8M5 875 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 EFCC1Q9HA90 598 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 PPP1R9AQ9ULJ8 1098 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 SYNPO2Q9UMS6 1093 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 GABRQQ9UN88 632 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 MYH6P13533 1939 aa12.45□□□□□ -0.42
SSBP1-210ENST00000481508 TTLL13PA6NNM8 815 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 BMP3P12645 472 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 TAL1P17542 331 aaPredicted RBP12.44□□□□□ -0.42
SSBP1-210ENST00000481508 SNAP25P60880 206 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 GPRC5AQ8NFJ5 357 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 NCOA7Q8NI08 942 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 ANKS1AQ92625 1134 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 KCNB2Q92953 911 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 GMCL1Q96IK5 515 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 ADAMTS5Q9UNA0 930 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 PTCH2Q9Y6C5 1203 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 PLXNA1Q9UIW2 1896 aa12.44□□□□□ -0.42
SSBP1-210ENST00000481508 LCTP09848 1927 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 TMEM232C9JQI7 657 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 VWA5AO00534 786 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 FMNL1O95466 1100 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-210ENST00000481508 PDHBP11177 359 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 HSPA4P34932 840 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 SLC1A4P43007 532 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 VASPP50552 380 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-210ENST00000481508 FCGRTP55899 365 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 PRKCZQ05513 592 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 TMEM132BQ14DG7 1078 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 DGKHQ86XP1 1220 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 KIFC2Q96AC6 838 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 TCEANC2Q96MN5 208 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 TTC14Q96N46 770 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 SLF1Q9BQI6 1058 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 CPVLQ9H3G5 476 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 RABGAP1Q9Y3P9 1069 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 ZNF236Q9UL36 1845 aa12.43□□□□□ -0.42
SSBP1-210ENST00000481508 MYPNQ86TC9 1320 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 BAZ2BQ9UIF8 2168 aaKnown RBP12.42□□□□□ -0.42
SSBP1-210ENST00000481508 SEC24BO95487 1268 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 GOLGA8HP0CJ92 632 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 SNHG28P0DPA3 235 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 CPA1P15085 419 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 SLC16A2P36021 539 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 CCDC96Q2M329 555 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 SLC9C1Q4G0N8 1177 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 Q7L0L9 218 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 RALYLQ86SE5 291 aaKnown RBP12.42□□□□□ -0.42
SSBP1-210ENST00000481508 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 PNMA1Q8ND90 353 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 IGDCC4Q8TDY8 1250 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 GTF3C2Q8WUA4 911 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-210ENST00000481508 DCAF4Q8WV16 495 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 DPF3Q92784 378 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 UBAC1Q9BSL1 405 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 MOV10L1Q9BXT6 1211 aaKnown RBP12.42□□□□□ -0.42
SSBP1-210ENST00000481508 LRRC2Q9BYS8 371 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 HOXC10Q9NYD6 342 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 SRRDQ9UH36 339 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 FEM1BQ9UK73 627 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 ZNF214Q9UL59 606 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-210ENST00000481508 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
SSBP1-210ENST00000481508 SNX14Q9Y5W7 946 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 MUC3AQ02505 3323 aa12.42□□□□□ -0.42
SSBP1-210ENST00000481508 TNPO2O14787 897 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms