RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 PAK6Q9NQU5 681 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-208ENST00000481484 BIN2Q9UBW5 565 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-208ENST00000481484 NR2E3Q9Y5X4 410 aa5.02□□□□□ -1.61
VPS13D-208ENST00000481484 SZT2Q5T011 3432 aa5.02□□□□□ -1.61
VPS13D-208ENST00000481484 ROBO3Q96MS0 1386 aa5.02□□□□□ -1.61
VPS13D-208ENST00000481484 LTBP2Q14767 1821 aa5.02□□□□□ -1.61
VPS13D-208ENST00000481484 LAMA4Q16363 1823 aa5.02□□□□□ -1.61
VPS13D-208ENST00000481484 ZNFX1Q9P2E3 1918 aaKnown RBP5.01□□□□□ -1.61
VPS13D-208ENST00000481484 J3QL48 77 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 ZBTB7BO15156 539 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-208ENST00000481484 ADCY3O60266 1144 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 F12P00748 615 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-208ENST00000481484 RLBP1P12271 317 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 CCL5P13501 91 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 EN2P19622 333 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-208ENST00000481484 CYP7A1P22680 504 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 ZAP70P43403 619 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 USP5P45974 858 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 CLK2P49760 499 aaKnown RBP5.01□□□□□ -1.61
VPS13D-208ENST00000481484 FLT3LGP49771 235 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 HERVK_113P62684 666 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 CAP1Q01518 475 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 SPP2Q13103 211 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 SKIV2LQ15477 1246 aaKnown RBP5.01□□□□□ -1.61
VPS13D-208ENST00000481484 CSPP1Q1MSJ5 1256 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 CTC1Q2NKJ3 1217 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 LRRFIP1Q32MZ4 808 aaKnown RBP5.01□□□□□ -1.61
VPS13D-208ENST00000481484 ZNF787Q6DD87 383 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 USP17L2Q6R6M4 530 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 LBX2Q6XYB7 198 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 TBC1D9Q6ZT07 1266 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 UBE2Q1Q7Z7E8 422 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 AACSQ86V21 672 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 MAPKAPK5Q8IW41 473 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 ZFPM1Q8IX07 1006 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 ANKRD13CQ8N6S4 541 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 U2AF1L4Q8WU68 220 aaKnown RBP5.01□□□□□ -1.61
VPS13D-208ENST00000481484 BAP1Q92560 729 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 DDRGK1Q96HY6 314 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 GPATCH3Q96I76 525 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 RNF208Q9H0X6 261 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 ASCC2Q9H1I8 757 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-208ENST00000481484 C1orf115Q9H7X2 142 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 DNAJC18Q9H819 358 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 POLR3EQ9NVU0 708 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 SWAP70Q9UH65 585 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 TTC28Q96AY4 2481 aa5.01□□□□□ -1.61
VPS13D-208ENST00000481484 MAGEB6P1A0A0J9YX57 407 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 MSCO60682 206 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 IFIT2P09913 472 aaKnown RBP5□□□□□ -1.61
VPS13D-208ENST00000481484 PDE6AP16499 860 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 ZKSCAN1P17029 563 aaPredicted RBP5□□□□□ -1.61
VPS13D-208ENST00000481484 CTGFP29279 349 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 COPB2P35606 906 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 RGS2P41220 211 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 HABP4Q5JVS0 413 aaKnown RBP5□□□□□ -1.61
VPS13D-208ENST00000481484 TREML2Q5T2D2 321 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 ZSCAN25Q6NSZ9 544 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 TATDN1Q6P1N9 297 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 TMEM179Q6ZVK1 233 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 ADGRA1Q86SQ6 560 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 CCAR1Q8IX12 1150 aaKnown RBP5□□□□□ -1.61
VPS13D-208ENST00000481484 MAGEB6Q8N7X4 407 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 MB21D1Q8N884 522 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 GPRC5AQ8NFJ5 357 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 RHPN1Q8TCX5 695 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 TGFBRAP1Q8WUH2 860 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 LPAR1Q92633 364 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 EAF2Q96CJ1 260 aaPredicted RBP5□□□□□ -1.61
VPS13D-208ENST00000481484 RIOK1Q9BRS2 568 aaKnown RBP5□□□□□ -1.61
VPS13D-208ENST00000481484 KIAA1683Q9H0B3 1180 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 XRN2Q9H0D6 950 aaKnown RBP eCLIP5□□□□□ -1.61
VPS13D-208ENST00000481484 CWC22Q9HCG8 908 aaKnown RBP5□□□□□ -1.61
VPS13D-208ENST00000481484 CABP5Q9NP86 173 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 PIH1D3Q9NQM4 214 aaKnown RBP5□□□□□ -1.61
VPS13D-208ENST00000481484 SNRKQ9NRH2 765 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 ATP8A2Q9NTI2 1148 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 TLR7Q9NYK1 1049 aaKnown RBP5□□□□□ -1.61
VPS13D-208ENST00000481484 TNNQ9UQP3 1299 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 EXOC6BQ9Y2D4 811 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 RABGAP1Q9Y3P9 1069 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 IVNS1ABPQ9Y6Y0 642 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 LRRC37A2A6NM11 1700 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 A0A0C4DFX4 3053 aa5□□□□□ -1.61
VPS13D-208ENST00000481484 RPTORQ8N122 1335 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 COL6A3P12111 3177 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 MCM3APO60318 1980 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 FAM196BA6NMK8 535 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 USP17L15C9J2P7 530 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 USP17L13C9JLJ4 530 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 USP17L11C9JVI0 530 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 USP17L18D6R9N7 530 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 USP17L22D6RA61 530 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 USP17L17D6RBQ6 530 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 USP17L19D6RCP7 530 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 USP17L20D6RJB6 530 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 ST8SIA5O15466 376 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 GDF11O95390 407 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 SGPL1O95470 568 aa4.99□□□□□ -1.61
VPS13D-208ENST00000481484 GH2P01242 217 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms