RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ASMTLO95671 621 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 FSTP19883 344 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 NFIAQ12857 509 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 NMIQ13287 307 aaPredicted RBP7.57□□□□□ -1.2
UPF3A-207ENST00000481131 HSP90AA2PQ14568 343 aaPredicted RBP7.57□□□□□ -1.2
UPF3A-207ENST00000481131 PPP2R5DQ14738 602 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 CYP27C1Q4G0S4 372 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 NOL9Q5SY16 702 aaKnown RBP7.57□□□□□ -1.2
UPF3A-207ENST00000481131 FAM181AQ8N9Y4 354 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 BTN2A2Q8WVV5 523 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 PUS7Q96PZ0 661 aaKnown RBP7.57□□□□□ -1.2
UPF3A-207ENST00000481131 SLC26A8Q96RN1 970 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 PRR13Q9NZ81 148 aa7.57□□□□□ -1.2
UPF3A-207ENST00000481131 TRAV20A0A0B4J274 112 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 SCO2A0A1W2PP80 73 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 CTSKP43235 329 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 OXCT1P55809 520 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 SF1Q15637 639 aaKnown RBP7.56□□□□□ -1.2
UPF3A-207ENST00000481131 MFSD4AQ8N468 514 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 DBNDD2Q9BQY9 259 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 HDAC8Q9BY41 377 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 CHST7Q9NS84 486 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 KCNH3Q9ULD8 1083 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 CD2APQ9Y5K6 639 aa7.56□□□□□ -1.2
UPF3A-207ENST00000481131 H0Y8X5 98 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 MEIS1O00470 390 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 NOP56O00567 594 aaKnown RBP7.55□□□□□ -1.2
UPF3A-207ENST00000481131 KCNH1O95259 989 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 FGFR1P11362 822 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 SRFP11831 508 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 PABPC1P11940 636 aaKnown RBP7.55□□□□□ -1.2
UPF3A-207ENST00000481131 GYS2P54840 703 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 CYP27A1Q02318 531 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 CYP4F3Q08477 520 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 CBX2Q14781 532 aaPredicted RBP7.55□□□□□ -1.2
UPF3A-207ENST00000481131 NKPD1Q17RQ9 610 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 ZC3H12BQ5HYM0 836 aaKnown RBP7.55□□□□□ -1.2
UPF3A-207ENST00000481131 GTF2IRD2BQ6EKJ0 949 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 GTF2IRD2Q86UP8 949 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 PIWIL2Q8TC59 973 aaKnown RBP7.55□□□□□ -1.2
UPF3A-207ENST00000481131 ZDHHC15Q96MV8 337 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 FEZ1Q99689 392 aa7.55□□□□□ -1.2
UPF3A-207ENST00000481131 DUSP15Q9H1R2 295 aaPredicted RBP7.55□□□□□ -1.2
UPF3A-207ENST00000481131 CWC22Q9HCG8 908 aaKnown RBP7.55□□□□□ -1.2
UPF3A-207ENST00000481131 DIS3Q9Y2L1 958 aaKnown RBP7.55□□□□□ -1.2
UPF3A-207ENST00000481131 MRPS23Q9Y3D9 190 aaKnown RBP7.55□□□□□ -1.2
UPF3A-207ENST00000481131 WASH4PA8MWX3 477 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 WDR64B1ANS9 1081 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 PRODHO43272 600 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 CLSTN1O94985 981 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 IGLV1-40P01703 118 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 C21orf62-AS1Q17RA5 79 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 SHKBP1Q8TBC3 707 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 MCMBPQ9BTE3 642 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 IER2Q9BTL4 223 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 DHRS4Q9BTZ2 278 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 GPR62Q9BZJ7 368 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 ST14Q9Y5Y6 855 aa7.54□□□□□ -1.2
UPF3A-207ENST00000481131 TRBV23-1A0A0A0MS06 115 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 GNAT3A8MTJ3 354 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
UPF3A-207ENST00000481131 VAMP4O75379 141 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 ITIH2P19823 946 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 GRB10Q13322 594 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 LRP8Q14114 963 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 TCEA2Q15560 299 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 DALRD3Q5D0E6 543 aaKnown RBP7.53□□□□□ -1.2
UPF3A-207ENST00000481131 DUSP27Q5VZP5 1158 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 POMZP3Q6PJE2 187 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 CRTC3Q6UUV7 619 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 SPACA3Q8IXA5 215 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 GPATCH3Q96I76 525 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 CDC6Q99741 560 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 DSCC1Q9BVC3 393 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 NKX2-4Q9H2Z4 354 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 PLAGL2Q9UPG8 496 aa7.53□□□□□ -1.2
UPF3A-207ENST00000481131 GPR55Q9Y2T6 319 aaPredicted RBP7.53□□□□□ -1.2
UPF3A-207ENST00000481131 DLX3O60479 287 aa7.52□□□□□ -1.21
UPF3A-207ENST00000481131 MED26O95402 600 aa7.52□□□□□ -1.21
UPF3A-207ENST00000481131 GFRA1P56159 465 aa7.52□□□□□ -1.21
UPF3A-207ENST00000481131 NSMFQ6X4W1 530 aa7.52□□□□□ -1.21
UPF3A-207ENST00000481131 SCUBE1Q8IWY4 988 aa7.52□□□□□ -1.21
UPF3A-207ENST00000481131 SYNPOQ8N3V7 929 aa7.52□□□□□ -1.21
UPF3A-207ENST00000481131 NCOA5Q9HCD5 579 aaKnown RBP7.52□□□□□ -1.21
UPF3A-207ENST00000481131 FAM155AB1AL88 458 aaPredicted RBP7.51□□□□□ -1.21
UPF3A-207ENST00000481131 RAPGEF3O95398 923 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 C6orf222P0C671 652 aaPredicted RBP7.51□□□□□ -1.21
UPF3A-207ENST00000481131 CDKAL1Q5VV42 579 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 CRACR2BQ8N4Y2 399 aaPredicted RBP7.51□□□□□ -1.21
UPF3A-207ENST00000481131 DAGLBQ8NCG7 672 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 ENOX1Q8TC92 643 aaKnown RBP7.51□□□□□ -1.21
UPF3A-207ENST00000481131 TCTN2Q96GX1 697 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 C1orf159Q96HA4 380 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 CLUHP3Q96NS8 147 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 OSBPL1AQ9BXW6 950 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 LRRC4CQ9HCJ2 640 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 ATG3Q9NT62 314 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 RNF112Q9ULX5 631 aa7.51□□□□□ -1.21
UPF3A-207ENST00000481131 SF3B6Q9Y3B4 125 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms