RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 ZMAT2Q96NC0 199 aaKnown RBP11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 EIF2AQ9BY44 585 aaKnown RBP11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 SLC12A4Q9UP95 1085 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 TTC30AQ86WT1 665 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 C16orf71Q8IYS4 520 aaPredicted RBP11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 CACNA2D3Q8IZS8 1091 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 STKLD1Q8NE28 680 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 RNPC3Q96LT9 517 aaKnown RBP11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 RMND1Q9NWS8 449 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 FBXO9Q9UK97 447 aaPredicted RBP11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 KNDC1Q76NI1 1749 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 ABCC1P33527 1531 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 MYPNQ86TC9 1320 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 TRIM43BA6NCK2 446 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 RGL2O15211 777 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 WFS1O76024 890 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 ATP6V1C1P21283 382 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 USP46P62068 366 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 AMPD2Q01433 879 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 MAP7Q14244 749 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 NCAPHQ15003 741 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 LARP1BQ659C4 914 aaKnown RBP11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 CCDC70Q6NSX1 233 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 ATRIPQ8WXE1 791 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 PTPRN2Q92932 1015 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 CGREF1Q99674 301 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 MRPL46Q9H2W6 279 aaKnown RBP11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 ANO2Q9NQ90 1003 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 ATP8A2Q9NTI2 1148 aa11.46□□□□□ -0.57
PRPF4B-206ENST00000481109 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 TUBP50607 506 aa11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 SLC44A4Q53GD3 710 aa11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 ARFGAP2Q8N6H7 521 aa11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 CLIP3Q96DZ5 547 aa11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 PANX2Q96RD6 677 aa11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 HAPLN3Q96S86 360 aa11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 CCDC28BQ9BUN5 200 aa11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 MRPL44Q9H9J2 332 aaKnown RBP11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 RHBDL2Q9NX52 303 aa11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.58
PRPF4B-206ENST00000481109 ADGRF5Q8IZF2 1346 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 CCDC162PA2VCL2 907 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 GMNCA6NCL1 334 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 AKR1B10O60218 316 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 ALDH2P05091 517 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 GPSM2P81274 684 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 GUCY1B3Q02153 619 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 SAFB2Q14151 953 aaKnown RBP eCLIP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 ATL3Q6DD88 541 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 OTUD7AQ8TE49 926 aaPredicted RBP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 WDR60Q8WVS4 1066 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 TSR2Q969E8 191 aaKnown RBP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 SEC16BQ96JE7 1060 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 SENP3Q9H4L4 574 aaPredicted RBP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 CEP131Q9UPN4 1083 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 LEMD3Q9Y2U8 911 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 ATP6V0A2Q9Y487 856 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 CEMIPQ8WUJ3 1361 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 MADDQ8WXG6 1647 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 E7EVH7 732 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 TTI1O43156 1089 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 ACTN4O43707 911 aaKnown RBP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 ACADSP16219 412 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 FUT4P22083 530 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 GSTT1P30711 240 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 MECOMQ03112 1051 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 MAP3K12Q12852 859 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 NNTQ13423 1086 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 CAMK2BQ13554 666 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 KARSQ15046 597 aaKnown RBP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 FXNQ16595 210 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 IRGCQ6NXR0 463 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 CD302Q8IX05 232 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 ENGASEQ8NFI3 743 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 ARL8AQ96BM9 186 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 CCDC85AQ96PX6 553 aaPredicted RBP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 NAA15Q9BXJ9 866 aaKnown RBP11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 SIL1Q9H173 461 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 PANK4Q9NVE7 773 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 CFAP45Q9UL16 551 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 EMILIN1Q9Y6C2 1016 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 COMMD3-BMI1R4GMX3 469 aa11.45□□□□□ -0.58
PRPF4B-206ENST00000481109 IQGAP1P46940 1657 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 HSF2BPO75031 334 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 MTRF1O75570 445 aaKnown RBP11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 MSL3P1P0C860 447 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 NR1D1P20393 614 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 UBASH3AP57075 661 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 GUCY1A3Q02108 690 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 FAM160A1Q05DH4 1040 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 LSAMPQ13449 338 aa11.44□□□□□ -0.58
PRPF4B-206ENST00000481109 PARP10Q53GL7 1025 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms