RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 HYPKQ9NX55 129 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 FAM13BQ9NYF5 915 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 GPRC5DQ9NZD1 345 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 ZMIZ1Q9ULJ6 1067 aa8.36□□□□□ -1.07
LRCH3-216ENST00000481048 ABCC4O15439 1325 aa8.35□□□□□ -1.07
LRCH3-216ENST00000481048 COL4A5P29400 1685 aa8.35□□□□□ -1.07
LRCH3-216ENST00000481048 TNFRSF10BO14763 440 aa8.35□□□□□ -1.07
LRCH3-216ENST00000481048 TCERG1O14776 1098 aaKnown RBP8.35□□□□□ -1.07
LRCH3-216ENST00000481048 SMNDC1O75940 238 aaKnown RBP eCLIP8.35□□□□□ -1.077e-6■■□□□ 11.8
LRCH3-216ENST00000481048 ANXA1P04083 346 aa8.35□□□□□ -1.07
LRCH3-216ENST00000481048 HCLS1P14317 486 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-216ENST00000481048 SCNN1AP37088 669 aa8.35□□□□□ -1.07
LRCH3-216ENST00000481048 CALD1Q05682 793 aaKnown RBP8.35□□□□□ -1.07
LRCH3-216ENST00000481048 NAA30Q147X3 362 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-216ENST00000481048 SF3B3Q15393 1217 aaKnown RBP8.35□□□□□ -1.07
LRCH3-216ENST00000481048 AOC3Q16853 763 aa8.35□□□□□ -1.07
LRCH3-216ENST00000481048 TTC39BQ5VTQ0 682 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-216ENST00000481048 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-216ENST00000481048 DPP8Q6V1X1 898 aaPredicted RBP8.35□□□□□ -1.07
LRCH3-216ENST00000481048 ADARB2Q9NS39 739 aaKnown RBP8.35□□□□□ -1.07
LRCH3-216ENST00000481048 STOML1Q9UBI4 398 aa8.35□□□□□ -1.07
LRCH3-216ENST00000481048 PGAP2Q9UHJ9 254 aa8.35□□□□□ -1.07
LRCH3-216ENST00000481048 LTBP1Q14766 1721 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 WISP1O95388 367 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 CDC27P30260 824 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 CDC25BP30305 580 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 CD68P34810 354 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-216ENST00000481048 ECE1P42892 770 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 CXCL9Q07325 125 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 ELOAQ14241 798 aaKnown RBP8.34□□□□□ -1.07
LRCH3-216ENST00000481048 MCTP1Q6DN14 999 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 CIAPIN1Q6FI81 312 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 ISCA1Q9BUE6 129 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 CHPF2Q9P2E5 772 aa8.34□□□□□ -1.07
LRCH3-216ENST00000481048 FNDC3AQ9Y2H6 1198 aaKnown RBP8.34□□□□□ -1.07
LRCH3-216ENST00000481048 LAS1LQ9Y4W2 734 aaKnown RBP8.34□□□□□ -1.07
LRCH3-216ENST00000481048 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
LRCH3-216ENST00000481048 WDR33Q9C0J8 1336 aaKnown RBP8.33□□□□□ -1.08
LRCH3-216ENST00000481048 LRRC37AA6NMS7 1700 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 H7C1D1 291 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 FOXN1O15353 648 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 GSC2O15499 205 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 DHX15O43143 795 aaKnown RBP8.33□□□□□ -1.08
LRCH3-216ENST00000481048 IGLV1-40P01703 118 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 ZNF853P0CG23 659 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 ZAP70P43403 619 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 CD97P48960 835 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 DUSP27Q5VZP5 1158 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 ACAD11Q709F0 780 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 CCDC146Q8IYE0 955 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 GPR152Q8TDT2 470 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 DPF2Q92785 391 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 HHIPL1Q96JK4 782 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 RASSF4Q9H2L5 321 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 PRKRIP1Q9H875 184 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-216ENST00000481048 KCNK4Q9NYG8 393 aa8.33□□□□□ -1.08
LRCH3-216ENST00000481048 ABT1Q9ULW3 272 aaKnown RBP8.33□□□□□ -1.08
LRCH3-216ENST00000481048 MAP2K2P36507 400 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 GNAI1P63096 354 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 KRT24Q2M2I5 525 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 CST9Q5W186 159 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-216ENST00000481048 FAM89AQ96GI7 184 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 EYA3Q99504 573 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 BCL2L13Q9BXK5 485 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 CEP41Q9BYV8 373 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 IFT57Q9NWB7 429 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 CXXC1Q9P0U4 656 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-216ENST00000481048 CNOT7Q9UIV1 285 aaKnown RBP8.32□□□□□ -1.08
LRCH3-216ENST00000481048 MYH3P11055 1940 aa8.32□□□□□ -1.08
LRCH3-216ENST00000481048 MED26O95402 600 aa8.31□□□□□ -1.08
LRCH3-216ENST00000481048 RPS12P25398 132 aaKnown RBP8.31□□□□□ -1.08
LRCH3-216ENST00000481048 GMPSP49915 693 aaPredicted RBP8.31□□□□□ -1.08
LRCH3-216ENST00000481048 RPS8P62241 208 aaKnown RBP8.31□□□□□ -1.08
LRCH3-216ENST00000481048 ADAMTSL4Q6UY14 1074 aa8.31□□□□□ -1.08
LRCH3-216ENST00000481048 CDC37L1Q7L3B6 337 aa8.31□□□□□ -1.08
LRCH3-216ENST00000481048 ARMC10Q8N2F6 343 aa8.31□□□□□ -1.08
LRCH3-216ENST00000481048 CCDC191Q8NCU4 936 aa8.31□□□□□ -1.08
LRCH3-216ENST00000481048 CAPNS2Q96L46 248 aa8.31□□□□□ -1.08
LRCH3-216ENST00000481048 CASP8AP2Q9UKL3 1982 aa8.31□□□□□ -1.08
LRCH3-216ENST00000481048 YDJCA8MPS7 323 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 IRS4O14654 1257 aaPredicted RBP8.3□□□□□ -1.08
LRCH3-216ENST00000481048 APAF1O14727 1248 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 FSCN2O14926 492 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 CA12O43570 354 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 DDX58O95786 925 aaKnown RBP8.3□□□□□ -1.08
LRCH3-216ENST00000481048 TGFB1P01137 390 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 LBX1P52954 281 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 CCDC30Q5VVM6 783 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 FAM117BQ6P1L5 589 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 SAPCD2Q86UD0 394 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 NCAPG2Q86XI2 1143 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 UTP4Q969X6 686 aaKnown RBP8.3□□□□□ -1.08
LRCH3-216ENST00000481048 GPR101Q96P66 508 aaPredicted RBP8.3□□□□□ -1.08
LRCH3-216ENST00000481048 PBX4Q9BYU1 374 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 SH2B1Q9NRF2 756 aaPredicted RBP8.3□□□□□ -1.08
LRCH3-216ENST00000481048 ABI2Q9NYB9 513 aaPredicted RBP8.3□□□□□ -1.08
LRCH3-216ENST00000481048 PODXL2Q9NZ53 605 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 STIM2Q9P246 746 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms