RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 A0A0G2JMZ2 1700 aa16.14■□□□□ 0.17
NDC1-202ENST00000480952 DUSP11O75319 330 aaKnown RBP16.14■□□□□ 0.17
NDC1-202ENST00000480952 SNAI1O95863 264 aaPredicted RBP16.14■□□□□ 0.17
NDC1-202ENST00000480952 C6orf222P0C671 652 aaPredicted RBP16.14■□□□□ 0.17
NDC1-202ENST00000480952 EEF2P13639 858 aaKnown RBP16.14■□□□□ 0.17
NDC1-202ENST00000480952 CDK7P50613 346 aa16.14■□□□□ 0.17
NDC1-202ENST00000480952 ZKSCAN2Q63HK3 967 aa16.14■□□□□ 0.17
NDC1-202ENST00000480952 LCORLQ8N3X6 602 aa16.14■□□□□ 0.17
NDC1-202ENST00000480952 PPP1R12CQ9BZL4 782 aa16.14■□□□□ 0.17
NDC1-202ENST00000480952 SLC28A3Q9HAS3 691 aa16.14■□□□□ 0.17
NDC1-202ENST00000480952 GOPCQ9HD26 462 aa16.14■□□□□ 0.17
NDC1-202ENST00000480952 ZNF214Q9UL59 606 aaPredicted RBP16.14■□□□□ 0.17
NDC1-202ENST00000480952 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
NDC1-202ENST00000480952 SYNGAP1Q96PV0 1343 aa16.14■□□□□ 0.17
NDC1-202ENST00000480952 MYADML2A6NDP7 307 aa16.13■□□□□ 0.17
NDC1-202ENST00000480952 ARVCFO00192 962 aa16.13■□□□□ 0.17
NDC1-202ENST00000480952 TLR3O15455 904 aaKnown RBP16.13■□□□□ 0.17
NDC1-202ENST00000480952 ASGR1P07306 291 aa16.13■□□□□ 0.17
NDC1-202ENST00000480952 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
NDC1-202ENST00000480952 NKX2-4Q9H2Z4 354 aa16.13■□□□□ 0.17
NDC1-202ENST00000480952 KANSL2Q9H9L4 492 aa16.13■□□□□ 0.17
NDC1-202ENST00000480952 A0A0U1RQG5 324 aaPredicted RBP16.12■□□□□ 0.17
NDC1-202ENST00000480952 CST5P28325 142 aaPredicted RBP16.12■□□□□ 0.17
NDC1-202ENST00000480952 SLC4A3P48751 1232 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 CDK8P49336 464 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 IRX5P78411 483 aaPredicted RBP16.12■□□□□ 0.17
NDC1-202ENST00000480952 ACVR2BQ13705 512 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 GNASQ5JWF2 1037 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 FAM83BQ5T0W9 1011 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 MAMDC4Q6UXC1 1216 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 ERC1Q8IUD2 1116 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 REPS2Q8NFH8 660 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 HERVK_113Q902F9 699 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 ARMT1Q9H993 441 aa16.12■□□□□ 0.17
NDC1-202ENST00000480952 GOLIM4O00461 696 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 PRKAB2O43741 272 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 FGBP02675 491 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 CYP2C18P33260 490 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
NDC1-202ENST00000480952 FAM126BQ8IXS8 530 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 DNAJC2Q99543 621 aaKnown RBP16.11■□□□□ 0.17
NDC1-202ENST00000480952 C1QTNF1Q9BXJ1 281 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 TEX13BQ9BXU2 312 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 IL23AQ9NPF7 189 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 ATP8A2Q9NTI2 1148 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 EXOC6BQ9Y2D4 811 aa16.11■□□□□ 0.17
NDC1-202ENST00000480952 CYP2D7A0A087X1C5 515 aa16.1■□□□□ 0.17
NDC1-202ENST00000480952 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
NDC1-202ENST00000480952 GJA9P57773 515 aa16.1■□□□□ 0.17
NDC1-202ENST00000480952 CCDC144BQ3MJ40 725 aa16.1■□□□□ 0.17
NDC1-202ENST00000480952 C12orf60Q5U649 245 aa16.1■□□□□ 0.17
NDC1-202ENST00000480952 MICALL1Q8N3F8 863 aa16.1■□□□□ 0.17
NDC1-202ENST00000480952 NECAB3Q96P71 396 aaPredicted RBP16.1■□□□□ 0.17
NDC1-202ENST00000480952 SLF1Q9BQI6 1058 aa16.1■□□□□ 0.17
NDC1-202ENST00000480952 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.1■□□□□ 0.17
NDC1-202ENST00000480952 CXXC1Q9P0U4 656 aaPredicted RBP16.1■□□□□ 0.17
NDC1-202ENST00000480952 DNAJC25-GNG10A0A024R161 153 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 USP17L12C9JPN9 530 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 USP17L21D6R901 530 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 SMIM22K7EJ46 135 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 MBD4O95243 580 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 OTOP2Q7RTS6 562 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 ZNF467Q7Z7K2 595 aaPredicted RBP16.09■□□□□ 0.17
NDC1-202ENST00000480952 ITPRIPQ8IWB1 547 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 FTSJ3Q8IY81 847 aaKnown RBP16.09■□□□□ 0.17
NDC1-202ENST00000480952 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 ABHD16BQ9H3Z7 469 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 IL1RAPL2Q9NP60 686 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 YBX2Q9Y2T7 364 aaKnown RBP16.09■□□□□ 0.17
NDC1-202ENST00000480952 RIPK3Q9Y572 518 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 CTDP1Q9Y5B0 961 aaPredicted RBP16.09■□□□□ 0.17
NDC1-202ENST00000480952 ZNFX1Q9P2E3 1918 aaKnown RBP16.09■□□□□ 0.17
NDC1-202ENST00000480952 CHD9Q3L8U1 2897 aa16.09■□□□□ 0.17
NDC1-202ENST00000480952 ADCY6O43306 1168 aa16.08■□□□□ 0.16
NDC1-202ENST00000480952 BMP1P13497 986 aa16.08■□□□□ 0.16
NDC1-202ENST00000480952 AAK1Q2M2I8 961 aa16.08■□□□□ 0.16
NDC1-202ENST00000480952 C16orf86Q6ZW13 317 aa16.08■□□□□ 0.16
NDC1-202ENST00000480952 CPXCR1Q8N123 301 aa16.08■□□□□ 0.16
NDC1-202ENST00000480952 ANKRD35Q8N283 1001 aa16.08■□□□□ 0.16
NDC1-202ENST00000480952 NUP88Q99567 741 aaPredicted RBP16.08■□□□□ 0.16
NDC1-202ENST00000480952 UPF3AQ9H1J1 476 aaKnown RBP16.08■□□□□ 0.16
NDC1-202ENST00000480952 HIPK3Q9H422 1215 aa16.08■□□□□ 0.16
NDC1-202ENST00000480952 NAV1Q8NEY1 1877 aa16.08■□□□□ 0.16
NDC1-202ENST00000480952 ZBED4O75132 1171 aa16.07■□□□□ 0.16
NDC1-202ENST00000480952 CD4P01730 458 aa16.07■□□□□ 0.16
NDC1-202ENST00000480952 RABGGTBP53611 331 aa16.07■□□□□ 0.16
NDC1-202ENST00000480952 SKIV2LQ15477 1246 aaKnown RBP16.07■□□□□ 0.16
NDC1-202ENST00000480952 HSP90AB4PQ58FF6 505 aa16.07■□□□□ 0.16
NDC1-202ENST00000480952 PPP2R2DQ66LE6 453 aa16.07■□□□□ 0.16
NDC1-202ENST00000480952 CEP85Q6P2H3 762 aa16.07■□□□□ 0.16
NDC1-202ENST00000480952 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
NDC1-202ENST00000480952 PRPF38AQ8NAV1 312 aaKnown RBP16.07■□□□□ 0.16
NDC1-202ENST00000480952 BCL11AQ9H165 835 aa16.07■□□□□ 0.16
NDC1-202ENST00000480952 BDP1A6H8Y1 2624 aa16.07■□□□□ 0.16
NDC1-202ENST00000480952 PLXNA1Q9UIW2 1896 aa16.06■□□□□ 0.16
NDC1-202ENST00000480952 CCL23P55773 120 aa16.06■□□□□ 0.16
NDC1-202ENST00000480952 BEX3Q00994 111 aa16.06■□□□□ 0.16
NDC1-202ENST00000480952 TFF2Q03403 129 aa16.06■□□□□ 0.16
NDC1-202ENST00000480952 SLFNL1Q499Z3 407 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms