RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 C12orf60Q5U649 245 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 ZNF365Q70YC5 407 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 TMEM199Q8N511 208 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 REPS2Q8NFH8 660 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 ADAMTS19Q8TE59 1207 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 VTI1AQ96AJ9 217 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 GOPCQ9HD26 462 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 IL1RAPL2Q9NP60 686 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 ATP8A2Q9NTI2 1148 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 ZHX1Q9UKY1 873 aaPredicted RBP13.63□□□□□ -0.23
TTC28-206ENST00000480563 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 SYNGAP1Q96PV0 1343 aa13.63□□□□□ -0.23
TTC28-206ENST00000480563 C6orf222P0C671 652 aaPredicted RBP13.62□□□□□ -0.23
TTC28-206ENST00000480563 ACRP10323 421 aa13.62□□□□□ -0.23
TTC28-206ENST00000480563 ADGRE1Q14246 886 aa13.62□□□□□ -0.23
TTC28-206ENST00000480563 CEP85Q6P2H3 762 aa13.62□□□□□ -0.23
TTC28-206ENST00000480563 MAMDC4Q6UXC1 1216 aa13.62□□□□□ -0.23
TTC28-206ENST00000480563 FTSJ3Q8IY81 847 aaKnown RBP13.62□□□□□ -0.23
TTC28-206ENST00000480563 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
TTC28-206ENST00000480563 DNAJC2Q99543 621 aaKnown RBP13.62□□□□□ -0.23
TTC28-206ENST00000480563 MSRAQ9UJ68 235 aa13.62□□□□□ -0.23
TTC28-206ENST00000480563 BDP1A6H8Y1 2624 aa13.62□□□□□ -0.23
TTC28-206ENST00000480563 NAV1Q8NEY1 1877 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 ZNFX1Q9P2E3 1918 aaKnown RBP13.61□□□□□ -0.23
TTC28-206ENST00000480563 DNAJC25-GNG10A0A024R161 153 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 USP17L12C9JPN9 530 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 USP17L21D6R901 530 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 ARVCFO00192 962 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 MBD4O95243 580 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 ASGR1P07306 291 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 IGFBP4P22692 258 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 CST5P28325 142 aaPredicted RBP13.61□□□□□ -0.23
TTC28-206ENST00000480563 SLC4A3P48751 1232 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 ACVR2BQ13705 512 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 RAB30Q15771 203 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 SLFNL1Q499Z3 407 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 SNRNP48Q6IEG0 339 aaKnown RBP13.61□□□□□ -0.23
TTC28-206ENST00000480563 PSRC1Q6PGN9 363 aaPredicted RBP13.61□□□□□ -0.23
TTC28-206ENST00000480563 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 AMOTL1Q8IY63 956 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 RHPN1Q8TCX5 695 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
TTC28-206ENST00000480563 UHRF1Q96T88 793 aaPredicted RBP13.61□□□□□ -0.23
TTC28-206ENST00000480563 TEX13BQ9BXU2 312 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 PPP1R12CQ9BZL4 782 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 SPC25Q9HBM1 224 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 RIPK3Q9Y572 518 aa13.61□□□□□ -0.23
TTC28-206ENST00000480563 A0A0U1RQG5 324 aaPredicted RBP13.6□□□□□ -0.23
TTC28-206ENST00000480563 APBB1O00213 710 aa13.6□□□□□ -0.23
TTC28-206ENST00000480563 TLR3O15455 904 aaKnown RBP13.6□□□□□ -0.23
TTC28-206ENST00000480563 GJA9P57773 515 aa13.6□□□□□ -0.23
TTC28-206ENST00000480563 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
TTC28-206ENST00000480563 GNASQ5JWF2 1037 aa13.6□□□□□ -0.23
TTC28-206ENST00000480563 ZNF467Q7Z7K2 595 aaPredicted RBP13.6□□□□□ -0.23
TTC28-206ENST00000480563 FAM126BQ8IXS8 530 aa13.6□□□□□ -0.23
TTC28-206ENST00000480563 IL27Q8NEV9 243 aa13.6□□□□□ -0.23
TTC28-206ENST00000480563 NUP88Q99567 741 aaPredicted RBP13.6□□□□□ -0.23
TTC28-206ENST00000480563 SLF1Q9BQI6 1058 aa13.6□□□□□ -0.23
TTC28-206ENST00000480563 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.6□□□□□ -0.23
TTC28-206ENST00000480563 ADCY6O43306 1168 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 RLBP1P12271 317 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 CYP2C18P33260 490 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 ADD2P35612 726 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 CCDC144BQ3MJ40 725 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 CPXCR1Q8N123 301 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 CLASRPQ8N2M8 674 aaKnown RBP13.59□□□□□ -0.23
TTC28-206ENST00000480563 HERVK_113Q902F9 699 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 DDRGK1Q96HY6 314 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 UPF3AQ9H1J1 476 aaKnown RBP13.59□□□□□ -0.23
TTC28-206ENST00000480563 NKX2-4Q9H2Z4 354 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 ABHD16BQ9H3Z7 469 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 SLC28A3Q9HAS3 691 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 IL23AQ9NPF7 189 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 MUC3AQ02505 3323 aa13.59□□□□□ -0.23
TTC28-206ENST00000480563 NCOR1O75376 2440 aa13.58□□□□□ -0.24
TTC28-206ENST00000480563 CD4P01730 458 aa13.58□□□□□ -0.24
TTC28-206ENST00000480563 FGBP02675 491 aa13.58□□□□□ -0.24
TTC28-206ENST00000480563 IFIT2P09913 472 aaKnown RBP13.58□□□□□ -0.24
TTC28-206ENST00000480563 PLA2G5P39877 138 aa13.58□□□□□ -0.24
TTC28-206ENST00000480563 PRPF38AQ8NAV1 312 aaKnown RBP13.58□□□□□ -0.24
TTC28-206ENST00000480563 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.58□□□□□ -0.24
TTC28-206ENST00000480563 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
TTC28-206ENST00000480563 MTIF3Q9H2K0 278 aaKnown RBP13.58□□□□□ -0.24
TTC28-206ENST00000480563 PAG1Q9NWQ8 432 aa13.58□□□□□ -0.24
TTC28-206ENST00000480563 CXXC1Q9P0U4 656 aaPredicted RBP13.58□□□□□ -0.24
TTC28-206ENST00000480563 SLC4A4Q9Y6R1 1079 aa13.58□□□□□ -0.24
TTC28-206ENST00000480563 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.24
TTC28-206ENST00000480563 F5H6K3 240 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 ATP2A1O14983 1001 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 CTAGE5O15320 804 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 ZBED4O75132 1171 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 KLRC3Q07444 240 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 CTR9Q6PD62 1173 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 ANKRD35Q8N283 1001 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 FAM122AQ96E09 287 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 KIF1BPQ96EK5 621 aa13.57□□□□□ -0.24
TTC28-206ENST00000480563 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.57□□□□□ -0.24
TTC28-206ENST00000480563 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
TTC28-206ENST00000480563 BOLA2Q9H3K6 86 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms