RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 LHX8Q68G74 356 aa17.76■□□□□ 0.43
TDP2-205ENST00000480495 SNRNP48Q6IEG0 339 aaKnown RBP17.76■□□□□ 0.43
TDP2-205ENST00000480495 FAM160B2Q86V87 743 aa17.76■□□□□ 0.43
TDP2-205ENST00000480495 CHURC1Q8WUH1 139 aa17.76■□□□□ 0.43
TDP2-205ENST00000480495 KIFC2Q96AC6 838 aa17.76■□□□□ 0.43
TDP2-205ENST00000480495 NBPF3Q9H094 633 aa17.76■□□□□ 0.43
TDP2-205ENST00000480495 SLC38A10Q9HBR0 1119 aa17.76■□□□□ 0.43
TDP2-205ENST00000480495 MYH4Q9Y623 1939 aa17.76■□□□□ 0.43
TDP2-205ENST00000480495 TMEM232C9JQI7 657 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 NMT2O60551 498 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 PLA2G6O60733 806 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 SLC1A4P43007 532 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 NT5C2P49902 561 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 STAT2P52630 851 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 OAZ1P54368 228 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 HAND2P61296 217 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 RRP12Q5JTH9 1297 aaKnown RBP17.75■□□□□ 0.43
TDP2-205ENST00000480495 AKNAD1Q5T1N1 836 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 MFSD6Q6ZSS7 791 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 DIS3LQ8TF46 1054 aaKnown RBP17.75■□□□□ 0.43
TDP2-205ENST00000480495 STAG1Q8WVM7 1258 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 MAML3Q96JK9 1138 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 RNF41Q9H4P4 317 aaPredicted RBP17.75■□□□□ 0.43
TDP2-205ENST00000480495 TCP11L1Q9NUJ3 509 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 DIS3Q9Y2L1 958 aaKnown RBP17.75■□□□□ 0.43
TDP2-205ENST00000480495 NR2E3Q9Y5X4 410 aa17.75■□□□□ 0.43
TDP2-205ENST00000480495 H0YGN5 161 aa17.74■□□□□ 0.43
TDP2-205ENST00000480495 CYBAP13498 195 aa17.74■□□□□ 0.43
TDP2-205ENST00000480495 MCCP23508 829 aa17.74■□□□□ 0.43
TDP2-205ENST00000480495 MNX1P50219 401 aaPredicted RBP17.74■□□□□ 0.43
TDP2-205ENST00000480495 TTC22Q5TAA0 569 aa17.74■□□□□ 0.43
TDP2-205ENST00000480495 RCSD1Q6JBY9 416 aa17.74■□□□□ 0.43
TDP2-205ENST00000480495 DSCC1Q9BVC3 393 aa17.74■□□□□ 0.43
TDP2-205ENST00000480495 C11orf49Q9H6J7 331 aa17.74■□□□□ 0.43
TDP2-205ENST00000480495 DDX20Q9UHI6 824 aaKnown RBP17.74■□□□□ 0.43
TDP2-205ENST00000480495 ISY1Q9ULR0 285 aaKnown RBP17.74■□□□□ 0.43
TDP2-205ENST00000480495 COL11A1P12107 1806 aaPredicted RBP17.73■□□□□ 0.43
TDP2-205ENST00000480495 ZNF213O14771 459 aa17.73■□□□□ 0.43
TDP2-205ENST00000480495 CNGA1P29973 690 aa17.73■□□□□ 0.43
TDP2-205ENST00000480495 IKQ13123 557 aaPredicted RBP17.73■□□□□ 0.43
TDP2-205ENST00000480495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.73■□□□□ 0.43
TDP2-205ENST00000480495 CPXCR1Q8N123 301 aa17.73■□□□□ 0.43
TDP2-205ENST00000480495 FBXO40Q9UH90 709 aa17.73■□□□□ 0.43
TDP2-205ENST00000480495 NRBP1Q9UHY1 535 aa17.73■□□□□ 0.43
TDP2-205ENST00000480495 EVI5O60447 810 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 PGK2P07205 417 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 TOP1P11387 765 aaKnown RBP17.72■□□□□ 0.43
TDP2-205ENST00000480495 GSPT1P15170 499 aaKnown RBP17.72■□□□□ 0.43
TDP2-205ENST00000480495 ZNF792Q3KQV3 632 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 TBC1D10CQ8IV04 446 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 TRPV1Q8NER1 839 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 CHST13Q8NET6 341 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 DCAF4Q8WV16 495 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 ESR2Q92731 530 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 TTC14Q96N46 770 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 RAVER2Q9HCJ3 691 aaKnown RBP17.72■□□□□ 0.43
TDP2-205ENST00000480495 CTNNA3Q9UI47 895 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 RIPK3Q9Y572 518 aa17.72■□□□□ 0.43
TDP2-205ENST00000480495 MSL3Q8N5Y2 521 aaKnown RBP17.71■□□□□ 0.43
TDP2-205ENST00000480495 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
TDP2-205ENST00000480495 TMEM47Q9BQJ4 181 aa17.71■□□□□ 0.43
TDP2-205ENST00000480495 TINF2Q9BSI4 451 aa17.71■□□□□ 0.43
TDP2-205ENST00000480495 SEPT4O43236 478 aa17.7■□□□□ 0.42
TDP2-205ENST00000480495 COL6A1P12109 1028 aa17.7■□□□□ 0.42
TDP2-205ENST00000480495 SLC4A3P48751 1232 aa17.7■□□□□ 0.42
TDP2-205ENST00000480495 IMMTQ16891 758 aaKnown RBP17.7■□□□□ 0.42
TDP2-205ENST00000480495 KCTD1Q719H9 257 aa17.7■□□□□ 0.42
TDP2-205ENST00000480495 RUFY2Q8WXA3 655 aa17.7■□□□□ 0.42
TDP2-205ENST00000480495 RAD50Q92878 1312 aa17.7■□□□□ 0.42
TDP2-205ENST00000480495 DNAJC25-GNG10A0A024R161 153 aa17.69■□□□□ 0.42
TDP2-205ENST00000480495 CCDC96Q2M329 555 aa17.69■□□□□ 0.42
TDP2-205ENST00000480495 TKFCQ3LXA3 575 aa17.69■□□□□ 0.42
TDP2-205ENST00000480495 CCDC178Q5BJE1 867 aa17.69■□□□□ 0.42
TDP2-205ENST00000480495 HABP4Q5JVS0 413 aaKnown RBP17.69■□□□□ 0.42
TDP2-205ENST00000480495 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
TDP2-205ENST00000480495 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
TDP2-205ENST00000480495 PFASO15067 1338 aa17.69■□□□□ 0.42
TDP2-205ENST00000480495 NEDD4P46934 1319 aa17.69■□□□□ 0.42
TDP2-205ENST00000480495 PRAMEF19Q5SWL8 479 aa17.68■□□□□ 0.42
TDP2-205ENST00000480495 BTNL9Q6UXG8 535 aa17.68■□□□□ 0.42
TDP2-205ENST00000480495 ZNF467Q7Z7K2 595 aaPredicted RBP17.68■□□□□ 0.42
TDP2-205ENST00000480495 ANKRD35Q8N283 1001 aa17.68■□□□□ 0.42
TDP2-205ENST00000480495 ARRDC4Q8NCT1 418 aa17.68■□□□□ 0.42
TDP2-205ENST00000480495 ACAD9Q9H845 621 aa17.68■□□□□ 0.42
TDP2-205ENST00000480495 PRR12Q9ULL5 1215 aa17.68■□□□□ 0.42
TDP2-205ENST00000480495 DNM1LO00429 736 aa17.67■□□□□ 0.42
TDP2-205ENST00000480495 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
TDP2-205ENST00000480495 IQCA1Q86XH1 822 aa17.67■□□□□ 0.42
TDP2-205ENST00000480495 DGKHQ86XP1 1220 aa17.67■□□□□ 0.42
TDP2-205ENST00000480495 COLQQ9Y215 455 aaPredicted RBP17.67■□□□□ 0.42
TDP2-205ENST00000480495 CNPY2Q9Y2B0 182 aa17.67■□□□□ 0.42
TDP2-205ENST00000480495 ZNF536O15090 1300 aa17.67■□□□□ 0.42
TDP2-205ENST00000480495 SYNGAP1Q96PV0 1343 aa17.67■□□□□ 0.42
TDP2-205ENST00000480495 SLC34A2O95436 690 aa17.66■□□□□ 0.42
TDP2-205ENST00000480495 CHMLP26374 656 aa17.66■□□□□ 0.42
TDP2-205ENST00000480495 RASGRP2Q7LDG7 609 aa17.66■□□□□ 0.42
TDP2-205ENST00000480495 AGBL1Q96MI9 1066 aa17.66■□□□□ 0.42
TDP2-205ENST00000480495 KRT23Q9C075 422 aa17.66■□□□□ 0.42
TDP2-205ENST00000480495 IL25Q9H293 177 aa17.66■□□□□ 0.42
TDP2-205ENST00000480495 CNNM2Q9H8M5 875 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms