RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 GDPD2Q9HCC8 539 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 MAD2L2Q9UI95 211 aa12.06□□□□□ -0.48
LINC00173-203ENST00000480237 SCAF8Q9UPN6 1271 aaKnown RBP12.06□□□□□ -0.48
LINC00173-203ENST00000480237 hCG_1642624A0A1W2PR95 340 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 TRAK2O60296 914 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 GH2P01242 217 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 FUT2Q10981 343 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 SEPT2Q15019 361 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 SAFBQ15424 915 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 CCDC96Q2M329 555 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 SKOR2Q2VWA4 1001 aaPredicted RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 ASPRV1Q53RT3 343 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 VARS2Q5ST30 1063 aaKnown RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 FAM173BQ6P4H8 233 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 STAG2Q8N3U4 1231 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 PIBF1Q8WXW3 757 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 LMBRD1Q9NUN5 540 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 SRCAPQ6ZRS2 3230 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 LOXHD1Q8IVV2 1947 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 PALM3A6NDB9 673 aaPredicted RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 USP17L5A8MUK1 530 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 KLRF2D3W0D1 207 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 RAD21O60216 631 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 DDNO94850 711 aaPredicted RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 GOLGA8HP0CJ92 632 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 PDHBP11177 359 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 EEF2P13639 858 aaKnown RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 MLLT3P42568 568 aaPredicted RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 ANGEL2Q5VTE6 544 aaKnown RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 USP17L2Q6R6M4 530 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 MIGA2Q7L4E1 593 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 BRAPQ7Z569 592 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 ZNF454Q8N9F8 522 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 ZNF396Q96N95 335 aaPredicted RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 NYAP2Q9P242 653 aa12.05□□□□□ -0.48
LINC00173-203ENST00000480237 DDX49Q9Y6V7 483 aaKnown RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 V9GY48 417 aaPredicted RBP12.05□□□□□ -0.48
LINC00173-203ENST00000480237 FRMPD2Q68DX3 1309 aaPredicted RBP12.04□□□□□ -0.48
LINC00173-203ENST00000480237 MMP1P03956 469 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 SCG2P13521 617 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 EPS15P42566 896 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 USP48Q86UV5 1035 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 TMEM87AQ8NBN3 555 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 SPZ1Q9BXG8 430 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 SCAND2PQ9GZW5 306 aaPredicted RBP12.04□□□□□ -0.48
LINC00173-203ENST00000480237 ARHGEF10LQ9HCE6 1279 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 GGA3Q9NZ52 723 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 VPS54Q9P1Q0 977 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 ZBTB21Q9ULJ3 1066 aa12.04□□□□□ -0.48
LINC00173-203ENST00000480237 MYH11P35749 1972 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 KIF28PB7ZC32 967 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 MBD3O95983 291 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 PKN1Q16512 942 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 PFKFB3Q16875 520 aaPredicted RBP12.03□□□□□ -0.48
LINC00173-203ENST00000480237 SPATA32Q96LK8 384 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 TEPSINQ96N21 525 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 DEFB129Q9H1M3 183 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 BRMS1Q9HCU9 246 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 SEC63Q9UGP8 760 aaKnown RBP12.03□□□□□ -0.48
LINC00173-203ENST00000480237 PGAP2Q9UHJ9 254 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 CFAP45Q9UL16 551 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 KCNJ14Q9UNX9 436 aa12.03□□□□□ -0.48
LINC00173-203ENST00000480237 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
LINC00173-203ENST00000480237 SNHG28P0DPA3 235 aa12.02□□□□□ -0.49
LINC00173-203ENST00000480237 ZNF543Q08ER8 600 aa12.02□□□□□ -0.49
LINC00173-203ENST00000480237 RRP1BQ14684 758 aaKnown RBP12.02□□□□□ -0.49
LINC00173-203ENST00000480237 DCAF15Q66K64 600 aa12.02□□□□□ -0.49
LINC00173-203ENST00000480237 DIS3L2Q8IYB7 885 aaKnown RBP12.02□□□□□ -0.49
LINC00173-203ENST00000480237 DCAF4Q8WV16 495 aa12.02□□□□□ -0.49
LINC00173-203ENST00000480237 HOOK2Q96ED9 719 aa12.02□□□□□ -0.49
LINC00173-203ENST00000480237 CPVLQ9H3G5 476 aa12.02□□□□□ -0.49
LINC00173-203ENST00000480237 ADARB2Q9NS39 739 aaKnown RBP12.02□□□□□ -0.49
LINC00173-203ENST00000480237 TFIP11Q9UBB9 837 aaKnown RBP12.02□□□□□ -0.49
LINC00173-203ENST00000480237 SSC5DA1L4H1 1573 aa12.02□□□□□ -0.49
LINC00173-203ENST00000480237 DOCK5Q9H7D0 1870 aa12.02□□□□□ -0.49
LINC00173-203ENST00000480237 A0A0G2JMZ2 1700 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 CYTH3O43739 400 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 GRIN3BO60391 1043 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 KRT2P35908 639 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 CAP2P40123 477 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 CEBPZQ03701 1054 aaKnown RBP12.01□□□□□ -0.49
LINC00173-203ENST00000480237 KLHL40Q2TBA0 621 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 GPATCH4Q5T3I0 446 aaKnown RBP12.01□□□□□ -0.49
LINC00173-203ENST00000480237 MYSM1Q5VVJ2 828 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 SLFN13Q68D06 897 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 ATL3Q6DD88 541 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 CCDC148Q8NFR7 591 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.49
LINC00173-203ENST00000480237 MKL1Q969V6 931 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 RRP36Q96EU6 259 aaKnown RBP12.01□□□□□ -0.49
LINC00173-203ENST00000480237 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 ELP1O95163 1332 aa12.01□□□□□ -0.49
LINC00173-203ENST00000480237 PITPNM2Q9BZ72 1349 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms