RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 SEPT2Q15019 361 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 SSH3Q8TE77 659 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 ZNF512BQ96KM6 892 aaPredicted RBP13.06□□□□□ -0.32
CCDC58-205ENST00000479899 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
CCDC58-205ENST00000479899 CUL9Q8IWT3 2517 aa13.05□□□□□ -0.32
CCDC58-205ENST00000479899 HOXC6P09630 235 aa13.05□□□□□ -0.32
CCDC58-205ENST00000479899 GUCY1A2P33402 732 aa13.05□□□□□ -0.32
CCDC58-205ENST00000479899 ATP8B2P98198 1209 aa13.05□□□□□ -0.32
CCDC58-205ENST00000479899 TRIM60Q495X7 471 aa13.05□□□□□ -0.32
CCDC58-205ENST00000479899 C9orf50Q5SZB4 431 aa13.05□□□□□ -0.32
CCDC58-205ENST00000479899 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
CCDC58-205ENST00000479899 ITPRIPQ8IWB1 547 aa13.05□□□□□ -0.32
CCDC58-205ENST00000479899 FERMT2Q96AC1 680 aa13.05□□□□□ -0.32
CCDC58-205ENST00000479899 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
CCDC58-205ENST00000479899 MOV10L1Q9BXT6 1211 aaKnown RBP13.05□□□□□ -0.32
CCDC58-205ENST00000479899 MAGEB6P1A0A0J9YX57 407 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 SOWAHBA6NEL2 793 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 SHHQ15465 462 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 PRAMEF19Q5SWL8 479 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 FAM109BQ6ICB4 259 aaPredicted RBP13.04□□□□□ -0.32
CCDC58-205ENST00000479899 LBX2Q6XYB7 198 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 THSD4Q6ZMP0 1018 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 AACSQ86V21 672 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 NCAPG2Q86XI2 1143 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 CLEC10AQ8IUN9 316 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
CCDC58-205ENST00000479899 BADQ92934 168 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 PLSCR2Q9NRY7 297 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 VCANP13611 3396 aa13.04□□□□□ -0.32
CCDC58-205ENST00000479899 A0A1W2PRG0 241 aa13.03□□□□□ -0.32
CCDC58-205ENST00000479899 ERCC3P19447 782 aa13.03□□□□□ -0.32
CCDC58-205ENST00000479899 FAM47AQ5JRC9 791 aa13.03□□□□□ -0.32
CCDC58-205ENST00000479899 SLC39A5Q6ZMH5 540 aa13.03□□□□□ -0.32
CCDC58-205ENST00000479899 ARRDC4Q8NCT1 418 aa13.03□□□□□ -0.32
CCDC58-205ENST00000479899 MYLIPQ8WY64 445 aa13.03□□□□□ -0.32
CCDC58-205ENST00000479899 CDX2Q99626 313 aaPredicted RBP13.03□□□□□ -0.32
CCDC58-205ENST00000479899 SPATC1LQ9H0A9 340 aa13.03□□□□□ -0.32
CCDC58-205ENST00000479899 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
CCDC58-205ENST00000479899 MCM9Q9NXL9 1143 aa13.03□□□□□ -0.32
CCDC58-205ENST00000479899 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
CCDC58-205ENST00000479899 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.32
CCDC58-205ENST00000479899 SEPT4O43236 478 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 IGSF3O75054 1194 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 COBLO75128 1261 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 CYP2D6P10635 497 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 ADCYAP1R1P41586 468 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 COG2Q14746 738 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 OLFML2BQ68BL8 750 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 SH3RF1Q7Z6J0 888 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 SPICE1Q8N0Z3 855 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 SLC44A5Q8NCS7 719 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 MAFAQ8NHW3 353 aaPredicted RBP13.02□□□□□ -0.33
CCDC58-205ENST00000479899 SDR42E1Q8WUS8 393 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 RIOK1Q9BRS2 568 aaKnown RBP13.02□□□□□ -0.33
CCDC58-205ENST00000479899 CRNKL1Q9BZJ0 848 aaKnown RBP13.02□□□□□ -0.33
CCDC58-205ENST00000479899 SLC24A3Q9HC58 644 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 PDLIM7Q9NR12 457 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 PARP14Q460N5 1801 aa13.02□□□□□ -0.33
CCDC58-205ENST00000479899 CDH23Q9H251 3354 aa13.01□□□□□ -0.33
CCDC58-205ENST00000479899 SPTBN5Q9NRC6 3674 aaKnown RBP13.01□□□□□ -0.33
CCDC58-205ENST00000479899 APBB1O00213 710 aa13.01□□□□□ -0.33
CCDC58-205ENST00000479899 FLOT1O75955 427 aa13.01□□□□□ -0.33
CCDC58-205ENST00000479899 KIAA1755Q5JYT7 1200 aa13.01□□□□□ -0.33
CCDC58-205ENST00000479899 SWT1Q5T5J6 900 aaKnown RBP13.01□□□□□ -0.33
CCDC58-205ENST00000479899 ATG4CQ96DT6 458 aa13.01□□□□□ -0.33
CCDC58-205ENST00000479899 DYNLL2Q96FJ2 89 aa13.01□□□□□ -0.33
CCDC58-205ENST00000479899 PHOX2BQ99453 314 aa13.01□□□□□ -0.33
CCDC58-205ENST00000479899 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
CCDC58-205ENST00000479899 SLC5A4Q9NY91 659 aa13.01□□□□□ -0.33
CCDC58-205ENST00000479899 NOP58Q9Y2X3 529 aaKnown RBP13.01□□□□□ -0.33
CCDC58-205ENST00000479899 BAZ2AQ9UIF9 1905 aaKnown RBP13□□□□□ -0.33
CCDC58-205ENST00000479899 PLXNA1Q9UIW2 1896 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 ZNF532Q9HCE3 1301 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 STRNO43815 780 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 RAD21O60216 631 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 PDE6AP16499 860 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 ICA1Q05084 483 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 GABPAQ06546 454 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 LRRC41Q15345 812 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 SLC9C2Q5TAH2 1124 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 LCORLQ8N3X6 602 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 SHCBP1Q8NEM2 672 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 MAML3Q96JK9 1138 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 ARHGEF10LQ9HCE6 1279 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 HOXC10Q9NYD6 342 aa13□□□□□ -0.33
CCDC58-205ENST00000479899 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 GOLIM4O00461 696 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 PQBP1O60828 265 aaKnown RBP12.99□□□□□ -0.33
CCDC58-205ENST00000479899 AKR1B1P15121 316 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 FOSL2P15408 326 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 SLC4A3P48751 1232 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 CEP85Q6P2H3 762 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 TMEM179Q6ZVK1 233 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 TRIM43Q96BQ3 446 aaPredicted RBP12.99□□□□□ -0.33
CCDC58-205ENST00000479899 LENG1Q96BZ8 264 aaPredicted RBP12.99□□□□□ -0.33
CCDC58-205ENST00000479899 RNPC3Q96LT9 517 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms