RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 ECHDC1Q9NTX5 307 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 FAM184BQ9ULE4 1060 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 MYH7P12883 1935 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 ELP1O95163 1332 aa15.93■□□□□ 0.14
ABCF1-206ENST00000479542 IGKV6D-41A0A0C4DH26 115 aa15.92■□□□□ 0.14
ABCF1-206ENST00000479542 A0A1W2PQ45 241 aaPredicted RBP15.92■□□□□ 0.14
ABCF1-206ENST00000479542 A0A1W2PQY0 241 aa15.92■□□□□ 0.14
ABCF1-206ENST00000479542 DUSP11O75319 330 aaKnown RBP15.92■□□□□ 0.14
ABCF1-206ENST00000479542 OAZ1P54368 228 aa15.92■□□□□ 0.14
ABCF1-206ENST00000479542 C9orf50Q5SZB4 431 aa15.92■□□□□ 0.14
ABCF1-206ENST00000479542 CCSAPQ6IQ19 270 aaPredicted RBP15.92■□□□□ 0.14
ABCF1-206ENST00000479542 SH3RF1Q7Z6J0 888 aa15.92■□□□□ 0.14
ABCF1-206ENST00000479542 CDX2Q99626 313 aaPredicted RBP15.92■□□□□ 0.14
ABCF1-206ENST00000479542 PRDM5Q9NQX1 630 aaPredicted RBP15.92■□□□□ 0.14
ABCF1-206ENST00000479542 FBXO40Q9UH90 709 aa15.92■□□□□ 0.14
ABCF1-206ENST00000479542 COL11A1P12107 1806 aaPredicted RBP15.91■□□□□ 0.14
ABCF1-206ENST00000479542 SNAI1O95863 264 aaPredicted RBP15.91■□□□□ 0.14
ABCF1-206ENST00000479542 PGK2P07205 417 aa15.91■□□□□ 0.14
ABCF1-206ENST00000479542 LRRFIP1Q32MZ4 808 aaKnown RBP15.91■□□□□ 0.14
ABCF1-206ENST00000479542 APPBP2Q92624 585 aa15.91■□□□□ 0.14
ABCF1-206ENST00000479542 FERMT2Q96AC1 680 aa15.91■□□□□ 0.14
ABCF1-206ENST00000479542 DDX11Q96FC9 970 aa15.91■□□□□ 0.14
ABCF1-206ENST00000479542 MKNK2Q9HBH9 465 aa15.91■□□□□ 0.14
ABCF1-206ENST00000479542 MROH7Q68CQ1 1323 aa15.91■□□□□ 0.14
ABCF1-206ENST00000479542 PLXNA1Q9UIW2 1896 aa15.91■□□□□ 0.14
ABCF1-206ENST00000479542 DCDC2CA8MYV0 355 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 ZBED4O75132 1171 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 PGK1P00558 417 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 CHGBP05060 677 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 TAL1P17542 331 aaPredicted RBP15.9■□□□□ 0.14
ABCF1-206ENST00000479542 CDK7P50613 346 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 GMCL1P1Q8NEA9 526 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 CHST13Q8NET6 341 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 COL25A1Q9BXS0 654 aaPredicted RBP15.9■□□□□ 0.14
ABCF1-206ENST00000479542 ABHD16BQ9H3Z7 469 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 DCTPP1Q9H773 170 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 SLC38A10Q9HBR0 1119 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 FEM1BQ9UK73 627 aa15.9■□□□□ 0.14
ABCF1-206ENST00000479542 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.89■□□□□ 0.13
ABCF1-206ENST00000479542 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.89■□□□□ 0.13
ABCF1-206ENST00000479542 RNF113AO15541 343 aaKnown RBP15.89■□□□□ 0.13
ABCF1-206ENST00000479542 PLA2G6O60733 806 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 NDUFB10O96000 172 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 RAG1P15918 1043 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 ITGB8P26012 769 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 ACLYP53396 1101 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 FAAP100Q0VG06 881 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 PPP4R3BQ5MIZ7 849 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 SNRNP48Q6IEG0 339 aaKnown RBP15.89■□□□□ 0.13
ABCF1-206ENST00000479542 ZNF444Q8N0Y2 327 aaPredicted RBP15.89■□□□□ 0.13
ABCF1-206ENST00000479542 PCSK9Q8NBP7 692 aaKnown RBP15.89■□□□□ 0.13
ABCF1-206ENST00000479542 OSBP2Q969R2 916 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 UPF3AQ9H1J1 476 aaKnown RBP15.89■□□□□ 0.13
ABCF1-206ENST00000479542 MTMR4Q9NYA4 1195 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 RCAN3Q9UKA8 241 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 RIPK3Q9Y572 518 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 CDH23Q9H251 3354 aa15.89■□□□□ 0.13
ABCF1-206ENST00000479542 PATL2C9JE40 543 aaKnown RBP15.88■□□□□ 0.13
ABCF1-206ENST00000479542 MYCNP04198 464 aaPredicted RBP15.88■□□□□ 0.13
ABCF1-206ENST00000479542 GJA9P57773 515 aa15.88■□□□□ 0.13
ABCF1-206ENST00000479542 FPGSQ05932 587 aa15.88■□□□□ 0.13
ABCF1-206ENST00000479542 GPATCH3Q96I76 525 aa15.88■□□□□ 0.13
ABCF1-206ENST00000479542 SEZ6LQ9BYH1 1024 aa15.88■□□□□ 0.13
ABCF1-206ENST00000479542 TTYH1Q9H313 450 aaPredicted RBP15.88■□□□□ 0.13
ABCF1-206ENST00000479542 STARD7Q9NQZ5 370 aa15.88■□□□□ 0.13
ABCF1-206ENST00000479542 TMEM39AQ9NV64 488 aa15.88■□□□□ 0.13
ABCF1-206ENST00000479542 CLIP2Q9UDT6 1046 aa15.88■□□□□ 0.13
ABCF1-206ENST00000479542 SYNRGQ9UMZ2 1314 aa15.88■□□□□ 0.13
ABCF1-206ENST00000479542 PLIN4Q96Q06 1357 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 VCANP13611 3396 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 TTLL1O95922 423 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 TIMP1P01033 207 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 KCNA10Q16322 511 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 CCDC174Q6PII3 467 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
ABCF1-206ENST00000479542 RNPC3Q96LT9 517 aaKnown RBP15.87■□□□□ 0.13
ABCF1-206ENST00000479542 GLT1D1Q96MS3 346 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 FAM161BQ96MY7 647 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 SPC25Q9HBM1 224 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 TBX21Q9UL17 535 aa15.87■□□□□ 0.13
ABCF1-206ENST00000479542 GPAA1O43292 621 aa15.86■□□□□ 0.13
ABCF1-206ENST00000479542 TKFCQ3LXA3 575 aa15.86■□□□□ 0.13
ABCF1-206ENST00000479542 MFSD5Q6N075 450 aa15.86■□□□□ 0.13
ABCF1-206ENST00000479542 NEDD1Q8NHV4 660 aa15.86■□□□□ 0.13
ABCF1-206ENST00000479542 MAFAQ8NHW3 353 aaPredicted RBP15.86■□□□□ 0.13
ABCF1-206ENST00000479542 CEP95Q96GE4 821 aa15.86■□□□□ 0.13
ABCF1-206ENST00000479542 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.86■□□□□ 0.13
ABCF1-206ENST00000479542 CTDP1Q9Y5B0 961 aaPredicted RBP15.86■□□□□ 0.13
ABCF1-206ENST00000479542 TTC41PQ6P2S7 1318 aa15.86■□□□□ 0.13
ABCF1-206ENST00000479542 EYSQ5T1H1 3165 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 MINDY4BA8MYZ0 360 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 PQBP1O60828 265 aaKnown RBP15.85■□□□□ 0.13
ABCF1-206ENST00000479542 EPHB4P54760 987 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 PDE4BQ07343 736 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 FAM160B2Q86V87 743 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 IFNL3Q8IZI9 196 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 ANKRD35Q8N283 1001 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 CHURC1Q8WUH1 139 aa15.85■□□□□ 0.13
ABCF1-206ENST00000479542 GMCL1Q96IK5 515 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms