RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 MSL3Q8N5Y2 521 aaKnown RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 NUP88Q99567 741 aaPredicted RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 EIF3CQ99613 913 aaKnown RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 RTL9Q8NET4 1388 aa15□□□□□ -0.01
PDZRN3-208ENST00000479530 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 UBE4AQ14139 1066 aa15□□□□□ -0.01
PDZRN3-208ENST00000479530 FAM98CQ17RN3 349 aaKnown RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 FILIP1LQ4L180 1135 aa15□□□□□ -0.01
PDZRN3-208ENST00000479530 SECISBP2LQ93073 1101 aaKnown RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 NSUN4Q96CB9 384 aaKnown RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 CICQ96RK0 1608 aaPredicted RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 PHF20Q9BVI0 1012 aa15□□□□□ -0.01
PDZRN3-208ENST00000479530 MAPK8IP1Q9UQF2 711 aa15□□□□□ -0.01
PDZRN3-208ENST00000479530 PIP4K2BP78356 416 aa14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 IRX3P78415 501 aaPredicted RBP14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 SF3B3Q15393 1217 aaKnown RBP14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 CAVIN4Q5BKX8 364 aa14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 TMTC1Q8IUR5 882 aa14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 GSPT2Q8IYD1 628 aaKnown RBP14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 CTAGE1Q96RT6 745 aa14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 HINFPQ9BQA5 517 aa14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 DOCK2Q92608 1830 aa14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 KRT9P35527 623 aa14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 MMS19Q96T76 1030 aa14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 RNF26Q9BY78 433 aaPredicted RBP14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 GNL3LQ9NVN8 582 aaKnown RBP14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 ARAP2Q8WZ64 1704 aa14.99□□□□□ -0.01
PDZRN3-208ENST00000479530 XDHP47989 1333 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 SPATA31A5Q5VU36 1347 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 SPATA31A7Q8IWB4 1347 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 TIAM2Q8IVF5 1701 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 TRIM75PA6NK02 468 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 FBXO33Q7Z6M2 555 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 CATIPQ7Z7H3 387 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 MTRQ99707 1265 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 ITIH6Q6UXX5 1313 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 ZC3H4Q9UPT8 1303 aaKnown RBP14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 PRPF6O94906 941 aaKnown RBP14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 TUBB2AQ13885 445 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 WDR93Q6P2C0 686 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 CYP26C1Q6V0L0 522 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 TUBB2BQ9BVA1 445 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 DCP1AQ9NPI6 582 aaPredicted RBP14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 CEP131Q9UPN4 1083 aa14.98□□□□□ -0.01
PDZRN3-208ENST00000479530 ATP1A1P05023 1023 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 CCDC51Q96ER9 411 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 CAPZA3Q96KX2 299 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 GSDMAQ96QA5 445 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 ZNF652Q9Y2D9 606 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 BCORQ6W2J9 1755 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 PRPF3O43395 683 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 MYBL2P10244 700 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 KRT2P35908 639 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 COPB1P53618 953 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 RPS8P62241 208 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 GRIK5Q16478 980 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 IL17AQ16552 155 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 TRAPPC11Q7Z392 1133 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 TNFRSF25Q93038 417 aa14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 BAZ2AQ9UIF9 1905 aaKnown RBP14.97□□□□□ -0.01
PDZRN3-208ENST00000479530 USP17L8P0C7I0 530 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 MAGEA9P43362 315 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 RRAGBQ5VZM2 374 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 GPR101Q96P66 508 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 BRIP1Q9BX63 1249 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 GBP3Q9H0R5 595 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 MED4Q9NPJ6 270 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 LIMA1Q9UHB6 759 aaKnown RBP14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 MTMR7Q9Y216 660 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 CHD4Q14839 1912 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 MYH2Q9UKX2 1941 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 LRRC10BA6NIK2 292 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 NDUFA10O95299 355 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 USP14P54578 494 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 PTGDRQ13258 359 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 TMTC3Q6ZXV5 915 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 DYNLL2Q96FJ2 89 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 CDCA7Q9BWT1 371 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 HPCAL4Q9UM19 191 aa14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 EPN1Q9Y6I3 576 aaPredicted RBP14.96□□□□□ -0.01
PDZRN3-208ENST00000479530 CACNA1SQ13698 1873 aa14.96□□□□□ -0.02
PDZRN3-208ENST00000479530 SEMA3EO15041 775 aa14.96□□□□□ -0.02
PDZRN3-208ENST00000479530 CLEC4GQ6UXB4 293 aa14.96□□□□□ -0.02
PDZRN3-208ENST00000479530 PIK3AP1Q6ZUJ8 805 aa14.96□□□□□ -0.02
PDZRN3-208ENST00000479530 IQCA1Q86XH1 822 aa14.96□□□□□ -0.02
PDZRN3-208ENST00000479530 CCDC148Q8NFR7 591 aa14.96□□□□□ -0.02
PDZRN3-208ENST00000479530 ROBO1Q9Y6N7 1651 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 TTC26A0AVF1 554 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 KCNJ18B7U540 433 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 FGRP09769 529 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 CORO7P57737 925 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 KCNJ12Q14500 433 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 TCP11X2Q5H9J9 407 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 RASGRP4Q8TDF6 673 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 MYO1AQ9UBC5 1043 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 GDAQ9Y2T3 454 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 THRAP3Q9Y2W1 955 aaKnown RBP14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 EP400Q96L91 3159 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms