RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 IRS2Q9Y4H2 1338 aa27.77■■■□□ 2.04
SYNGAP1-206ENST00000479510 CCDC151A5D8V7 595 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 PRPHP41219 470 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 TFAP4Q01664 338 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 EVX2Q03828 476 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 DTHD1Q6ZMT9 781 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 ADSSL1Q8N142 457 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 PARD6BQ9BYG5 372 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 CCSER1Q9C0I3 900 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 MAGEF1Q9HAY2 307 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 CCDC194A0A1B0GVG4 234 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 KCNQ2O43526 872 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 CCT6AP40227 531 aaKnown RBP27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 CHMP4BP1P59074 171 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 WDR66Q8TBY9 1149 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 CUEDC2Q9H467 287 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 TFCP2L1Q9NZI6 479 aa27.76■■■□□ 2.03
SYNGAP1-206ENST00000479510 CTAGE9A4FU28 777 aa27.75■■■□□ 2.03
SYNGAP1-206ENST00000479510 EEF1GP26641 437 aaKnown RBP27.75■■■□□ 2.03
SYNGAP1-206ENST00000479510 NBPF5PQ86XG9 351 aaPredicted RBP27.75■■■□□ 2.03
SYNGAP1-206ENST00000479510 AMOTL1Q8IY63 956 aa27.75■■■□□ 2.03
SYNGAP1-206ENST00000479510 IL17RBQ9NRM6 502 aa27.75■■■□□ 2.03
SYNGAP1-206ENST00000479510 A0A1W2PQC6 194 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 TBC1D8O95759 1140 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 GSTO1P78417 241 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 TPTE2Q6XPS3 522 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 BICDL1Q6ZP65 573 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 NOC3LQ8WTT2 800 aaKnown RBP27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 VEGFAP15692 232 aaPredicted RBP27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 PRCPP42785 496 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 STIM1Q13586 685 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 CERS3Q8IU89 383 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 THAP9Q9H5L6 903 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 FAM205AQ6ZU69 1335 aa27.74■■■□□ 2.03
SYNGAP1-206ENST00000479510 RPS6KA4O75676 772 aa27.73■■■□□ 2.03
SYNGAP1-206ENST00000479510 HNRNPLLQ8WVV9 542 aaKnown RBP27.73■■■□□ 2.03
SYNGAP1-206ENST00000479510 NUP88Q99567 741 aaPredicted RBP27.73■■■□□ 2.03
SYNGAP1-206ENST00000479510 IRX2Q9BZI1 471 aaPredicted RBP27.73■■■□□ 2.03
SYNGAP1-206ENST00000479510 VPS16Q9H269 839 aa27.73■■■□□ 2.03
SYNGAP1-206ENST00000479510 USP17L8P0C7I0 530 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 PPP4CP60510 307 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 ZNF569Q5MCW4 686 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 TAB2Q9NYJ8 693 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 MAD2L2Q9UI95 211 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 TUBBP07437 444 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 ERVK-24P63145 666 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 WHAMMP3Q1A5X7 153 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 AK8Q96MA6 479 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 BARHL2Q9NY43 387 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 PCDHA6Q9UN73 950 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 PCDHA8Q9Y5H6 950 aa27.72■■■□□ 2.03
SYNGAP1-206ENST00000479510 ADAMTS3O15072 1205 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 BAG3O95817 575 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 USP5P45974 858 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 NAALADL2Q58DX5 795 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 NAPGQ99747 312 aaPredicted RBP27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 KBTBD4Q9NVX7 518 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 CCDC66A2RUB6 948 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 LGALS16A8MUM7 142 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 RHOBTB3O94955 611 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 LDHBP07195 334 aaKnown RBP27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 PARP1P09874 1014 aaKnown RBP27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 UBA7P41226 1012 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 KIF4BQ2VIQ3 1234 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 ZNF287Q9HBT7 754 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 ST7Q9NRC1 585 aa27.71■■■□□ 2.03
SYNGAP1-206ENST00000479510 SEC31AO94979 1220 aaKnown RBP27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 KRT9P35527 623 aa27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 UBXN1Q04323 297 aa27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 MSL3Q8N5Y2 521 aaKnown RBP27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 MSANTD4Q8NCY6 345 aa27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 GPKOWQ92917 476 aaPredicted RBP eCLIP27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 MKNK2Q9HBH9 465 aa27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 RAB21Q9UL25 225 aa27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 GDAQ9Y2T3 454 aa27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 LEMD3Q9Y2U8 911 aa27.7■■■□□ 2.02
SYNGAP1-206ENST00000479510 PALM3A6NDB9 673 aaPredicted RBP27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 PSMA7O14818 248 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 TM4SF1P30408 202 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 PPP1R2P41236 205 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 PIP4K2BP78356 416 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 IRF2BP1Q8IU81 584 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 GIMAP8Q8ND71 665 aaPredicted RBP27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 STXBP3O00186 592 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 LDHCP07864 332 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 ARHGAP25P42331 645 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 STAG2Q8N3U4 1231 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 MB21D1Q8N884 522 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 OR8K1Q8NGG5 319 aa27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 DHTKD1Q96HY7 919 aaPredicted RBP27.69■■■□□ 2.02
SYNGAP1-206ENST00000479510 ZPR1O75312 459 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 DNAJC7Q99615 494 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 FUT8Q9BYC5 575 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 KLRC4O43908 158 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 TSPY3P0CV98 308 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 TSPY8P0CW00 308 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 ORC2Q13416 577 aaPredicted RBP27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 TYW1BQ6NUM6 668 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 ZNF662Q6ZS27 426 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 ZNF444Q8N0Y2 327 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms