RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 ABRAQ8N0Z2 381 aa24.41■■□□□ 1.5
PKP4-209ENST00000479398 KRT23Q9C075 422 aa24.41■■□□□ 1.5
PKP4-209ENST00000479398 U3KPZ7 1027 aaPredicted RBP24.41■■□□□ 1.5
PKP4-209ENST00000479398 RPTORQ8N122 1335 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 ATP2A1O14983 1001 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 FDX1P10109 184 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 ZKSCAN1P17029 563 aaPredicted RBP24.4■■□□□ 1.5
PKP4-209ENST00000479398 ADORA2AP29274 412 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 STAT2P52630 851 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 CCDC178Q5BJE1 867 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 KCTD1Q719H9 257 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 NPLOC4Q8TAT6 608 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 MAP4K1Q92918 833 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 ZKSCAN3Q9BRR0 538 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 CNNM2Q9H8M5 875 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 SLC38A10Q9HBR0 1119 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 HMX1Q9NP08 348 aaPredicted RBP24.4■■□□□ 1.5
PKP4-209ENST00000479398 ISY1Q9ULR0 285 aaKnown RBP24.4■■□□□ 1.5
PKP4-209ENST00000479398 MTMR7Q9Y216 660 aa24.4■■□□□ 1.5
PKP4-209ENST00000479398 CTDP1Q9Y5B0 961 aaPredicted RBP24.4■■□□□ 1.5
PKP4-209ENST00000479398 SGPL1O95470 568 aa24.39■■□□□ 1.49
PKP4-209ENST00000479398 CENPBP07199 599 aaPredicted RBP24.39■■□□□ 1.49
PKP4-209ENST00000479398 FCER1AP12319 257 aa24.39■■□□□ 1.49
PKP4-209ENST00000479398 COPB2P35606 906 aa24.39■■□□□ 1.49
PKP4-209ENST00000479398 IQCA1Q86XH1 822 aa24.39■■□□□ 1.49
PKP4-209ENST00000479398 DGKHQ86XP1 1220 aa24.39■■□□□ 1.49
PKP4-209ENST00000479398 CPXCR1Q8N123 301 aa24.39■■□□□ 1.49
PKP4-209ENST00000479398 DCAF4Q8WV16 495 aa24.39■■□□□ 1.49
PKP4-209ENST00000479398 TEX13BQ9BXU2 312 aa24.39■■□□□ 1.49
PKP4-209ENST00000479398 PAK6Q9NQU5 681 aaPredicted RBP24.39■■□□□ 1.49
PKP4-209ENST00000479398 IKQ13123 557 aaPredicted RBP24.38■■□□□ 1.49
PKP4-209ENST00000479398 MAP3K21Q5TCX8 1036 aa24.38■■□□□ 1.49
PKP4-209ENST00000479398 KIAA1211Q6ZU35 1233 aa24.38■■□□□ 1.49
PKP4-209ENST00000479398 RAVER2Q9HCJ3 691 aaKnown RBP24.38■■□□□ 1.49
PKP4-209ENST00000479398 FLRT1Q9NZU1 646 aa24.38■■□□□ 1.49
PKP4-209ENST00000479398 COBLO75128 1261 aa24.37■■□□□ 1.49
PKP4-209ENST00000479398 CYP21A2P08686 494 aa24.37■■□□□ 1.49
PKP4-209ENST00000479398 CACNB2Q08289 660 aaPredicted RBP24.37■■□□□ 1.49
PKP4-209ENST00000479398 SNRNP48Q6IEG0 339 aaKnown RBP24.37■■□□□ 1.49
PKP4-209ENST00000479398 U2AF1L4Q8WU68 220 aaKnown RBP24.37■■□□□ 1.49
PKP4-209ENST00000479398 ANKS1AQ92625 1134 aa24.37■■□□□ 1.49
PKP4-209ENST00000479398 DEFB118Q96PH6 123 aa24.37■■□□□ 1.49
PKP4-209ENST00000479398 ESYT1Q9BSJ8 1104 aa24.37■■□□□ 1.49
PKP4-209ENST00000479398 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.37■■□□□ 1.494e-7■■□□□ 14.3
PKP4-209ENST00000479398 SLC5A4Q9NY91 659 aa24.37■■□□□ 1.49
PKP4-209ENST00000479398 RIPK3Q9Y572 518 aa24.37■■□□□ 1.49
PKP4-209ENST00000479398 BRCA2P51587 3418 aa24.36■■□□□ 1.49
PKP4-209ENST00000479398 PRKAR2AP13861 404 aaKnown RBP24.36■■□□□ 1.49
PKP4-209ENST00000479398 CAPN2P17655 700 aa24.36■■□□□ 1.49
PKP4-209ENST00000479398 SLC4A3P48751 1232 aa24.36■■□□□ 1.49
PKP4-209ENST00000479398 OAZ1P54368 228 aa24.36■■□□□ 1.49
PKP4-209ENST00000479398 MFSD14CQ5VZR4 134 aa24.36■■□□□ 1.49
PKP4-209ENST00000479398 RASGRP2Q7LDG7 609 aa24.36■■□□□ 1.49
PKP4-209ENST00000479398 SHISA4Q96DD7 197 aa24.36■■□□□ 1.49
PKP4-209ENST00000479398 ZSCAN10Q96SZ4 725 aaPredicted RBP24.36■■□□□ 1.49
PKP4-209ENST00000479398 MMP19Q99542 508 aa24.36■■□□□ 1.49
PKP4-209ENST00000479398 TFRCP02786 760 aaKnown RBP24.35■■□□□ 1.49
PKP4-209ENST00000479398 PDHBP11177 359 aa24.35■■□□□ 1.49
PKP4-209ENST00000479398 TRDNQ13061 729 aa24.35■■□□□ 1.49
PKP4-209ENST00000479398 CCDC96Q2M329 555 aa24.35■■□□□ 1.49
PKP4-209ENST00000479398 TTBK2Q6IQ55 1244 aa24.35■■□□□ 1.49
PKP4-209ENST00000479398 PRR12Q9ULL5 1215 aa24.35■■□□□ 1.49
PKP4-209ENST00000479398 ZNF236Q9UL36 1845 aa24.34■■□□□ 1.49
PKP4-209ENST00000479398 IGHA2P01877 340 aa24.34■■□□□ 1.49
PKP4-209ENST00000479398 KCTD2Q14681 263 aa24.34■■□□□ 1.49
PKP4-209ENST00000479398 ERICH6BQ5W0A0 696 aa24.34■■□□□ 1.49
PKP4-209ENST00000479398 BTNL9Q6UXG8 535 aa24.34■■□□□ 1.49
PKP4-209ENST00000479398 CRISPLD2Q9H0B8 497 aa24.34■■□□□ 1.49
PKP4-209ENST00000479398 RBM8AQ9Y5S9 174 aaKnown RBP24.34■■□□□ 1.49
PKP4-209ENST00000479398 OLFML2BQ68BL8 750 aa24.33■■□□□ 1.49
PKP4-209ENST00000479398 ENAHQ8N8S7 591 aaPredicted RBP24.33■■□□□ 1.49
PKP4-209ENST00000479398 LSG1Q9H089 658 aaKnown RBP24.33■■□□□ 1.49
PKP4-209ENST00000479398 GPCPD1Q9NPB8 672 aa24.33■■□□□ 1.49
PKP4-209ENST00000479398 FRMPD2Q68DX3 1309 aaPredicted RBP24.33■■□□□ 1.48
PKP4-209ENST00000479398 TNRC18O15417 2968 aaPredicted RBP24.33■■□□□ 1.48
PKP4-209ENST00000479398 E7EWF7 191 aa24.32■■□□□ 1.48
PKP4-209ENST00000479398 SNHG28P0DPA3 235 aa24.32■■□□□ 1.48
PKP4-209ENST00000479398 SLC16A2P36021 539 aa24.32■■□□□ 1.48
PKP4-209ENST00000479398 CYB5R4Q7L1T6 521 aa24.32■■□□□ 1.48
PKP4-209ENST00000479398 CHST13Q8NET6 341 aa24.32■■□□□ 1.48
PKP4-209ENST00000479398 UBAC1Q9BSL1 405 aa24.32■■□□□ 1.48
PKP4-209ENST00000479398 KAT14Q9H8E8 782 aa24.32■■□□□ 1.48
PKP4-209ENST00000479398 DIS3Q9Y2L1 958 aaKnown RBP24.32■■□□□ 1.48
PKP4-209ENST00000479398 ZNF536O15090 1300 aa24.32■■□□□ 1.48
PKP4-209ENST00000479398 TNKSO95271 1327 aa24.32■■□□□ 1.48
PKP4-209ENST00000479398 PGK2P07205 417 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 CCND3P30281 292 aaPredicted RBP24.31■■□□□ 1.48
PKP4-209ENST00000479398 CYP2C19P33261 490 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 SNAP25P60880 206 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 ZNF543Q08ER8 600 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 ZNF792Q3KQV3 632 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 PNMA1Q8ND90 353 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 MAML3Q96JK9 1138 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 AGBL1Q96MI9 1066 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 PPP4R2Q9NY27 417 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 TAF6LQ9Y6J9 622 aa24.31■■□□□ 1.48
PKP4-209ENST00000479398 SYDE2Q5VT97 1194 aa24.3■■□□□ 1.48
PKP4-209ENST00000479398 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.3■■□□□ 1.489e-8■■■□□ 16.7
PKP4-209ENST00000479398 NCOA7Q8NI08 942 aa24.3■■□□□ 1.48
PKP4-209ENST00000479398 DDX11Q96FC9 970 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms