RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 SLC38A10Q9HBR0 1119 aa23.56■■□□□ 1.36
HPS4-211ENST00000479064 FGRP09769 529 aa23.55■■□□□ 1.36
HPS4-211ENST00000479064 BMP3P12645 472 aa23.55■■□□□ 1.36
HPS4-211ENST00000479064 MCMDC2Q4G0Z9 681 aa23.55■■□□□ 1.36
HPS4-211ENST00000479064 SLFN13Q68D06 897 aa23.55■■□□□ 1.36
HPS4-211ENST00000479064 SNRNP48Q6IEG0 339 aaKnown RBP23.55■■□□□ 1.36
HPS4-211ENST00000479064 CCDC129Q6ZRS4 1044 aa23.55■■□□□ 1.36
HPS4-211ENST00000479064 GMCL1Q96IK5 515 aa23.55■■□□□ 1.36
HPS4-211ENST00000479064 LNPKQ9C0E8 428 aa23.55■■□□□ 1.36
HPS4-211ENST00000479064 OSBPL3Q9H4L5 887 aa23.55■■□□□ 1.36
HPS4-211ENST00000479064 ORC4O43929 436 aa23.54■■□□□ 1.36
HPS4-211ENST00000479064 FAM47AQ5JRC9 791 aa23.54■■□□□ 1.36
HPS4-211ENST00000479064 LRRC47Q8N1G4 583 aaKnown RBP23.54■■□□□ 1.36
HPS4-211ENST00000479064 TINF2Q9BSI4 451 aa23.54■■□□□ 1.36
HPS4-211ENST00000479064 TSPY2A6NKD2 308 aa23.53■■□□□ 1.36
HPS4-211ENST00000479064 PLA2G6O60733 806 aa23.53■■□□□ 1.36
HPS4-211ENST00000479064 NOVP48745 357 aa23.53■■□□□ 1.36
HPS4-211ENST00000479064 FAM160B2Q86V87 743 aa23.53■■□□□ 1.36
HPS4-211ENST00000479064 FBXO40Q9UH90 709 aa23.53■■□□□ 1.36
HPS4-211ENST00000479064 CTDP1Q9Y5B0 961 aaPredicted RBP23.53■■□□□ 1.36
HPS4-211ENST00000479064 PGK2P07205 417 aa23.52■■□□□ 1.36
HPS4-211ENST00000479064 LRRC26Q2I0M4 334 aa23.52■■□□□ 1.36
HPS4-211ENST00000479064 VPS53Q5VIR6 699 aa23.52■■□□□ 1.36
HPS4-211ENST00000479064 CHD1LQ86WJ1 897 aa23.52■■□□□ 1.36
HPS4-211ENST00000479064 CHST13Q8NET6 341 aa23.52■■□□□ 1.36
HPS4-211ENST00000479064 CHURC1Q8WUH1 139 aa23.52■■□□□ 1.36
HPS4-211ENST00000479064 KIFC2Q96AC6 838 aa23.52■■□□□ 1.36
HPS4-211ENST00000479064 SENP6Q9GZR1 1112 aaPredicted RBP23.52■■□□□ 1.36
HPS4-211ENST00000479064 ZMYND8Q9ULU4 1186 aaPredicted RBP23.52■■□□□ 1.36
HPS4-211ENST00000479064 DNAJC25-GNG10A0A024R161 153 aa23.51■■□□□ 1.35
HPS4-211ENST00000479064 A0A0D9SFI3 127 aa23.51■■□□□ 1.35
HPS4-211ENST00000479064 KBTBD13C9JR72 458 aa23.51■■□□□ 1.35
HPS4-211ENST00000479064 STAT2P52630 851 aa23.51■■□□□ 1.35
HPS4-211ENST00000479064 NUCB1Q02818 461 aa23.51■■□□□ 1.35
HPS4-211ENST00000479064 CTDSPL2Q05D32 466 aa23.51■■□□□ 1.35
HPS4-211ENST00000479064 ZNF467Q7Z7K2 595 aaPredicted RBP23.51■■□□□ 1.35
HPS4-211ENST00000479064 FAM227BQ96M60 508 aa23.51■■□□□ 1.35
HPS4-211ENST00000479064 SYNGAP1Q96PV0 1343 aa23.51■■□□□ 1.35
HPS4-211ENST00000479064 TRIM6-TRIM34B2RNG4 842 aa23.5■■□□□ 1.35
HPS4-211ENST00000479064 FGAP02671 866 aa23.5■■□□□ 1.35
HPS4-211ENST00000479064 HSPD1P10809 573 aaKnown RBP23.5■■□□□ 1.35
HPS4-211ENST00000479064 PCP11498 1178 aaKnown RBP23.5■■□□□ 1.35
HPS4-211ENST00000479064 SLC1A4P43007 532 aa23.5■■□□□ 1.35
HPS4-211ENST00000479064 MFAP1P55081 439 aaKnown RBP23.5■■□□□ 1.35
HPS4-211ENST00000479064 MAMDC4Q6UXC1 1216 aa23.5■■□□□ 1.35
HPS4-211ENST00000479064 STAG1Q8WVM7 1258 aa23.5■■□□□ 1.35
HPS4-211ENST00000479064 DDX11Q96FC9 970 aa23.5■■□□□ 1.35
HPS4-211ENST00000479064 IL17RBQ9NRM6 502 aa23.5■■□□□ 1.35
HPS4-211ENST00000479064 STX8Q9UNK0 236 aa23.5■■□□□ 1.35
HPS4-211ENST00000479064 RIPK3Q9Y572 518 aa23.5■■□□□ 1.35
HPS4-211ENST00000479064 NT5C2P49902 561 aa23.49■■□□□ 1.35
HPS4-211ENST00000479064 PRAMEF19Q5SWL8 479 aa23.49■■□□□ 1.35
HPS4-211ENST00000479064 PLEKHM2Q8IWE5 1019 aa23.49■■□□□ 1.35
HPS4-211ENST00000479064 CPXCR1Q8N123 301 aa23.49■■□□□ 1.35
HPS4-211ENST00000479064 CNPY2Q9Y2B0 182 aa23.49■■□□□ 1.35
HPS4-211ENST00000479064 CCDC171Q6TFL3 1326 aa23.49■■□□□ 1.35
HPS4-211ENST00000479064 TMEM232C9JQI7 657 aa23.48■■□□□ 1.35
HPS4-211ENST00000479064 RANBP6O60518 1105 aaKnown RBP23.48■■□□□ 1.35
HPS4-211ENST00000479064 IGHDP01880 384 aa23.48■■□□□ 1.35
HPS4-211ENST00000479064 RARBP10826 455 aa23.48■■□□□ 1.35
HPS4-211ENST00000479064 NMIQ13287 307 aaPredicted RBP23.48■■□□□ 1.35
HPS4-211ENST00000479064 GJC2Q5T442 439 aaPredicted RBP23.48■■□□□ 1.35
HPS4-211ENST00000479064 B4GALNT3Q6L9W6 998 aa23.48■■□□□ 1.35
HPS4-211ENST00000479064 EXOC6Q8TAG9 804 aa23.48■■□□□ 1.35
HPS4-211ENST00000479064 RAVER2Q9HCJ3 691 aaKnown RBP23.48■■□□□ 1.35
HPS4-211ENST00000479064 TCP11L1Q9NUJ3 509 aa23.48■■□□□ 1.35
HPS4-211ENST00000479064 ZNF865P0CJ78 1059 aaPredicted RBP23.47■■□□□ 1.35
HPS4-211ENST00000479064 AKR1A1P14550 325 aa23.47■■□□□ 1.35
HPS4-211ENST00000479064 SYN1P17600 705 aa23.47■■□□□ 1.35
HPS4-211ENST00000479064 MAGEA10P43363 369 aaPredicted RBP23.47■■□□□ 1.35
HPS4-211ENST00000479064 SNX17Q15036 470 aa23.47■■□□□ 1.35
HPS4-211ENST00000479064 LRRC41Q15345 812 aa23.47■■□□□ 1.35
HPS4-211ENST00000479064 TKFCQ3LXA3 575 aa23.47■■□□□ 1.35
HPS4-211ENST00000479064 C1orf53Q5VUE5 145 aa23.47■■□□□ 1.35
HPS4-211ENST00000479064 RCSD1Q6JBY9 416 aa23.47■■□□□ 1.35
HPS4-211ENST00000479064 SDSP20132 328 aa23.46■■□□□ 1.35
HPS4-211ENST00000479064 ZNF589Q86UQ0 364 aaPredicted RBP23.46■■□□□ 1.35
HPS4-211ENST00000479064 ANKRD35Q8N283 1001 aa23.46■■□□□ 1.35
HPS4-211ENST00000479064 RILPL2Q969X0 211 aa23.46■■□□□ 1.35
HPS4-211ENST00000479064 TACC3Q9Y6A5 838 aa23.46■■□□□ 1.35
HPS4-211ENST00000479064 HIP1O00291 1037 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 MCCP23508 829 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 ANO1Q5XXA6 986 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 SLC39A5Q6ZMH5 540 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 RNF180Q86T96 592 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 DCAF4Q8WV16 495 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 ACAD9Q9H845 621 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 XPNPEP3Q9NQH7 507 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 INCENPQ9NQS7 918 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 MCM3APO60318 1980 aa23.45■■□□□ 1.34
HPS4-211ENST00000479064 NMT2O60551 498 aa23.44■■□□□ 1.34
HPS4-211ENST00000479064 RTP1P59025 263 aa23.44■■□□□ 1.34
HPS4-211ENST00000479064 PHF24Q9UPV7 400 aa23.44■■□□□ 1.34
HPS4-211ENST00000479064 LAMA4Q16363 1823 aa23.43■■□□□ 1.34
HPS4-211ENST00000479064 ZNF536O15090 1300 aa23.43■■□□□ 1.34
HPS4-211ENST00000479064 SNAI1O95863 264 aaPredicted RBP23.43■■□□□ 1.34
HPS4-211ENST00000479064 TOP1P11387 765 aaKnown RBP23.43■■□□□ 1.34
HPS4-211ENST00000479064 ATN1P54259 1190 aaPredicted RBP23.43■■□□□ 1.34
HPS4-211ENST00000479064 IKQ13123 557 aaPredicted RBP23.43■■□□□ 1.34
HPS4-211ENST00000479064 LRIT3Q3SXY7 679 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms