RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 EPB41L4AQ9HCS5 686 aaPredicted RBP15.81■□□□□ 0.12
VCL-205ENST00000478896 CLIP2Q9UDT6 1046 aa15.81■□□□□ 0.12
VCL-205ENST00000478896 ZHX1Q9UKY1 873 aaPredicted RBP15.81■□□□□ 0.12
VCL-205ENST00000478896 ISY1Q9ULR0 285 aaKnown RBP15.81■□□□□ 0.12
VCL-205ENST00000478896 PHF24Q9UPV7 400 aa15.81■□□□□ 0.12
VCL-205ENST00000478896 ZBED4O75132 1171 aa15.8■□□□□ 0.12
VCL-205ENST00000478896 TAL1P17542 331 aaPredicted RBP15.8■□□□□ 0.12
VCL-205ENST00000478896 C1orf53Q5VUE5 145 aa15.8■□□□□ 0.12
VCL-205ENST00000478896 LRRC47Q8N1G4 583 aaKnown RBP15.8■□□□□ 0.12
VCL-205ENST00000478896 PRPF38AQ8NAV1 312 aaKnown RBP15.8■□□□□ 0.12
VCL-205ENST00000478896 NACAP1Q9BZK3 213 aa15.8■□□□□ 0.12
VCL-205ENST00000478896 A0A1W2PQ45 241 aaPredicted RBP15.79■□□□□ 0.12
VCL-205ENST00000478896 A0A1W2PQY0 241 aa15.79■□□□□ 0.12
VCL-205ENST00000478896 ERC2O15083 957 aa15.79■□□□□ 0.12
VCL-205ENST00000478896 PQBP1O60828 265 aaKnown RBP15.79■□□□□ 0.12
VCL-205ENST00000478896 CLTBP09497 229 aa15.79■□□□□ 0.12
VCL-205ENST00000478896 ZNF865P0CJ78 1059 aaPredicted RBP15.79■□□□□ 0.12
VCL-205ENST00000478896 SHHQ15465 462 aa15.79■□□□□ 0.12
VCL-205ENST00000478896 C9orf50Q5SZB4 431 aa15.79■□□□□ 0.12
VCL-205ENST00000478896 FAM109BQ6ICB4 259 aaPredicted RBP15.79■□□□□ 0.12
VCL-205ENST00000478896 SH3RF1Q7Z6J0 888 aa15.79■□□□□ 0.12
VCL-205ENST00000478896 MSL3Q8N5Y2 521 aaKnown RBP15.79■□□□□ 0.12
VCL-205ENST00000478896 CEP95Q96GE4 821 aa15.79■□□□□ 0.12
VCL-205ENST00000478896 TTC41PQ6P2S7 1318 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 SYNGAP1Q96PV0 1343 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 TRIM43BA6NCK2 446 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 TTLL1O95922 423 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 SLC3A2P08195 630 aaKnown RBP15.78■□□□□ 0.12
VCL-205ENST00000478896 TSPY3P0CV98 308 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 TSPY8P0CW00 308 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 TLE2Q04725 743 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 PDE4BQ07343 736 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 IFNL3Q8IZI9 196 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 TRIM43Q96BQ3 446 aaPredicted RBP15.78■□□□□ 0.12
VCL-205ENST00000478896 FSD1Q9BTV5 496 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 NAPBQ9H115 298 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 RAVER2Q9HCJ3 691 aaKnown RBP15.78■□□□□ 0.12
VCL-205ENST00000478896 STARD7Q9NQZ5 370 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 FEM1BQ9UK73 627 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 FAM184BQ9ULE4 1060 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 RIPK3Q9Y572 518 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 TACC3Q9Y6A5 838 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 MCM3APO60318 1980 aa15.78■□□□□ 0.12
VCL-205ENST00000478896 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
VCL-205ENST00000478896 IGKV6D-41A0A0C4DH26 115 aa15.77■□□□□ 0.12
VCL-205ENST00000478896 PATL2C9JE40 543 aaKnown RBP15.77■□□□□ 0.12
VCL-205ENST00000478896 RAG1P15918 1043 aa15.77■□□□□ 0.12
VCL-205ENST00000478896 ANKRD35Q8N283 1001 aa15.77■□□□□ 0.12
VCL-205ENST00000478896 NUP133Q8WUM0 1156 aa15.77■□□□□ 0.12
VCL-205ENST00000478896 GUCD1Q96NT3 240 aa15.77■□□□□ 0.12
VCL-205ENST00000478896 MTMR4Q9NYA4 1195 aa15.77■□□□□ 0.12
VCL-205ENST00000478896 FBXO40Q9UH90 709 aa15.77■□□□□ 0.12
VCL-205ENST00000478896 PLIN4Q96Q06 1357 aa15.76■□□□□ 0.11
VCL-205ENST00000478896 COL6A3P12111 3177 aa15.76■□□□□ 0.11
VCL-205ENST00000478896 ATP2A1O14983 1001 aa15.76■□□□□ 0.11
VCL-205ENST00000478896 ADAMTS4O75173 837 aa15.76■□□□□ 0.11
VCL-205ENST00000478896 IKQ13123 557 aaPredicted RBP15.76■□□□□ 0.11
VCL-205ENST00000478896 SLFN13Q68D06 897 aa15.76■□□□□ 0.11
VCL-205ENST00000478896 GMCL1P1Q8NEA9 526 aa15.76■□□□□ 0.11
VCL-205ENST00000478896 RNPC3Q96LT9 517 aaKnown RBP15.76■□□□□ 0.11
VCL-205ENST00000478896 SEC62Q99442 399 aaKnown RBP15.76■□□□□ 0.11
VCL-205ENST00000478896 TSEN34Q9BSV6 310 aaKnown RBP15.76■□□□□ 0.11
VCL-205ENST00000478896 SLC38A10Q9HBR0 1119 aa15.76■□□□□ 0.11
VCL-205ENST00000478896 HOMER2Q9NSB8 354 aa15.76■□□□□ 0.11
VCL-205ENST00000478896 SYNPO2Q9UMS6 1093 aa15.76■□□□□ 0.11
VCL-205ENST00000478896 DNAJC25-GNG10A0A024R161 153 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 MOXD2PA6NHM9 499 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 SNAI1O95863 264 aaPredicted RBP15.75■□□□□ 0.11
VCL-205ENST00000478896 C6orf222P0C671 652 aaPredicted RBP15.75■□□□□ 0.11
VCL-205ENST00000478896 BMP3P12645 472 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 STAT2P52630 851 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 ACLYP53396 1101 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 OAZ1P54368 228 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 PPARAQ07869 468 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 MAMDC4Q6UXC1 1216 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 ZNF467Q7Z7K2 595 aaPredicted RBP15.75■□□□□ 0.11
VCL-205ENST00000478896 CHST13Q8NET6 341 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 MKL1Q969V6 931 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 SPC25Q9HBM1 224 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 TMEM39AQ9NV64 488 aa15.75■□□□□ 0.11
VCL-205ENST00000478896 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.75■□□□□ 0.11
VCL-205ENST00000478896 ZBTB47Q9UFB7 747 aaPredicted RBP15.75■□□□□ 0.11
VCL-205ENST00000478896 DCDC2CA8MYV0 355 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 TMEM232C9JQI7 657 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 DUSP11O75319 330 aaKnown RBP15.74■□□□□ 0.11
VCL-205ENST00000478896 ITGB8P26012 769 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 SLC1A4P43007 532 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 TFAP4Q01664 338 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 FPGSQ05932 587 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 ACVR2BQ13705 512 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 KCNA10Q16322 511 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 ARMCX2Q7L311 632 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 NEDD1Q8NHV4 660 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 PI4K2BQ8TCG2 481 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 VTI1AQ96AJ9 217 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 CHMP4CQ96CF2 233 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 GLT1D1Q96MS3 346 aa15.74■□□□□ 0.11
VCL-205ENST00000478896 MROH7Q68CQ1 1323 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 MYADML2A6NDP7 307 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms