RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 FERMT1Q9BQL6 677 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 KCNJ18B7U540 433 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 POLR2MP0CAP2 368 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 CDC25AP30304 524 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 CYP4A11Q02928 519 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 MORC3Q14149 939 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 SCARF1Q14162 830 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 KCNJ12Q14500 433 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 ASIC2Q16515 512 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 KCTD1Q719H9 257 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 CCDC155Q8N6L0 562 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 OR8K1Q8NGG5 319 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 INCENPQ9NQS7 918 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 SWAP70Q9UH65 585 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 SLC16A2P36021 539 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 KLHL30Q0D2K2 578 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 STRN3Q13033 797 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 TBC1D9BQ66K14 1250 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 RRAGAQ7L523 313 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 CCDC91Q7Z6B0 441 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 KANSL2Q9H9L4 492 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 RAD17O75943 681 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 RNASE9P60153 205 aaKnown RBP15.79■□□□□ 0.12
NPHP4-208ENST00000478423 TNNC1P63316 161 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 TBC1D10CQ8IV04 446 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 SLC39A2Q9NP94 309 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 PCDHA4Q9UN74 947 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 GRIPAP1Q4V328 841 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 SPATA1Q5VX52 437 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 DCAF15Q66K64 600 aa15.79■□□□□ 0.12
NPHP4-208ENST00000478423 ARHGEF1Q92888 912 aaKnown RBP15.79■□□□□ 0.12
NPHP4-208ENST00000478423 RPN1P04843 607 aaKnown RBP15.78■□□□□ 0.12
NPHP4-208ENST00000478423 RNF187Q5TA31 235 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-208ENST00000478423 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 FLOT1O75955 427 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 GDF11O95390 407 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 GSDMAQ96QA5 445 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 PIGSQ96S52 555 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 CSADQ9Y600 493 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 AGLP35573 1532 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 FAM26FQ5R3K3 315 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 GSTA5Q7RTV2 222 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 TRERF1Q96PN7 1200 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 PSMB7Q99436 277 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 AZI2Q9H6S1 392 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 IKBKGQ9Y6K9 419 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 SPOPO43791 374 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 FOSP01100 380 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-208ENST00000478423 SECISBP2LQ93073 1101 aaKnown RBP15.78■□□□□ 0.12
NPHP4-208ENST00000478423 BRIP1Q9BX63 1249 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 AFF2P51816 1311 aa15.78■□□□□ 0.12
NPHP4-208ENST00000478423 ATG9AQ7Z3C6 839 aa15.77■□□□□ 0.12
NPHP4-208ENST00000478423 PLA2G4DQ86XP0 818 aa15.77■□□□□ 0.12
NPHP4-208ENST00000478423 DESI2Q9BSY9 194 aa15.77■□□□□ 0.12
NPHP4-208ENST00000478423 PRPF3O43395 683 aaKnown RBP15.77■□□□□ 0.12
NPHP4-208ENST00000478423 NPR1P16066 1061 aa15.77■□□□□ 0.12
NPHP4-208ENST00000478423 SLFN12Q8IYM2 578 aa15.77■□□□□ 0.12
NPHP4-208ENST00000478423 TDRD7Q8NHU6 1098 aaKnown RBP15.77■□□□□ 0.12
NPHP4-208ENST00000478423 COA7Q96BR5 231 aa15.77■□□□□ 0.12
NPHP4-208ENST00000478423 DNM2P50570 870 aa15.77■□□□□ 0.11
NPHP4-208ENST00000478423 TYW1BQ6NUM6 668 aa15.77■□□□□ 0.11
NPHP4-208ENST00000478423 TBCKQ8TEA7 893 aa15.77■□□□□ 0.11
NPHP4-208ENST00000478423 KIFAP3Q92845 792 aa15.77■□□□□ 0.11
NPHP4-208ENST00000478423 TTC14Q96N46 770 aa15.77■□□□□ 0.11
NPHP4-208ENST00000478423 NOX5Q96PH1 765 aa15.77■□□□□ 0.11
NPHP4-208ENST00000478423 COA1Q9GZY4 146 aa15.77■□□□□ 0.11
NPHP4-208ENST00000478423 PCDHB6Q9Y5E3 794 aa15.77■□□□□ 0.11
NPHP4-208ENST00000478423 CDK8P49336 464 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 DGKHQ86XP1 1220 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 TMEM87AQ8NBN3 555 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 PGBD1Q96JS3 809 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 ARMCX3Q9UH62 379 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-208ENST00000478423 CYP2D6P10635 497 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 XRCC5P13010 732 aaKnown RBP15.76■□□□□ 0.11
NPHP4-208ENST00000478423 U2AF2P26368 475 aaKnown RBP eCLIP15.76■□□□□ 0.11
NPHP4-208ENST00000478423 GRAMD1CQ8IYS0 662 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 MSANTD4Q8NCY6 345 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 SMCR8Q8TEV9 937 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-208ENST00000478423 PAGR1Q9BTK6 254 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 AS3MTQ9HBK9 375 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 OPA1O60313 960 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 C11orf57Q6ZUT1 292 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-208ENST00000478423 TIGD1Q96MW7 591 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 DHX36Q9H2U1 1008 aaKnown RBP15.76■□□□□ 0.11
NPHP4-208ENST00000478423 CALCOCO1Q9P1Z2 691 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 PI4KBQ9UBF8 816 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 MTUS1Q9ULD2 1270 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 CCPG1Q9ULG6 757 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 RIPOR2Q9Y4F9 1068 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 PIK3C2BO00750 1634 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 PLEKHA8P1O95397 391 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 LARSQ9P2J5 1176 aaKnown RBP15.76■□□□□ 0.11
NPHP4-208ENST00000478423 KIAA1024Q9UPX6 916 aa15.76■□□□□ 0.11
NPHP4-208ENST00000478423 RPAP1Q9BWH6 1393 aaPredicted RBP15.75■□□□□ 0.11
NPHP4-208ENST00000478423 TLDC2A0PJX2 215 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 STX10O60499 249 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 SLFN14P0C7P3 912 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 CYP2J2P51589 502 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 GNPTABQ3T906 1256 aa15.75■□□□□ 0.11
NPHP4-208ENST00000478423 SFMBT2Q5VUG0 894 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms