RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 CCDC142Q17RM4 750 aa4.3□□□□□ -1.72
CALD1-218ENST00000478075 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
CALD1-218ENST00000478075 MIIPQ5JXC2 388 aa4.3□□□□□ -1.72
CALD1-218ENST00000478075 GLCCI1Q86VQ1 547 aa4.3□□□□□ -1.72
CALD1-218ENST00000478075 CIR1Q86X95 450 aaPredicted RBP4.3□□□□□ -1.72
CALD1-218ENST00000478075 DNAJB8Q8NHS0 232 aa4.3□□□□□ -1.72
CALD1-218ENST00000478075 ADAMTS17Q8TE56 1095 aa4.3□□□□□ -1.72
CALD1-218ENST00000478075 USP33Q8TEY7 942 aa4.3□□□□□ -1.72
CALD1-218ENST00000478075 GTF3C2Q8WUA4 911 aaPredicted RBP4.3□□□□□ -1.72
CALD1-218ENST00000478075 CCDC74AQ96AQ1 378 aa4.3□□□□□ -1.72
CALD1-218ENST00000478075 PLCD4Q9BRC7 762 aa4.3□□□□□ -1.72
CALD1-218ENST00000478075 PROB1E7EW31 1015 aa4.29□□□□□ -1.72
CALD1-218ENST00000478075 SF3B2Q13435 895 aaKnown RBP4.29□□□□□ -1.72
CALD1-218ENST00000478075 FOXE3Q13461 319 aa4.29□□□□□ -1.72
CALD1-218ENST00000478075 SPDYAQ5MJ70 313 aa4.29□□□□□ -1.72
CALD1-218ENST00000478075 FAM26FQ5R3K3 315 aa4.29□□□□□ -1.72
CALD1-218ENST00000478075 LRFN4Q6PJG9 635 aa4.29□□□□□ -1.72
CALD1-218ENST00000478075 MPRIPQ6WCQ1 1025 aa4.29□□□□□ -1.72
CALD1-218ENST00000478075 DNERQ8NFT8 737 aa4.29□□□□□ -1.72
CALD1-218ENST00000478075 RNF141Q8WVD5 230 aa4.29□□□□□ -1.72
CALD1-218ENST00000478075 PLPPR2Q96GM1 343 aa4.29□□□□□ -1.72
CALD1-218ENST00000478075 NPEPPSL1A6NEC2 478 aa4.28□□□□□ -1.72
CALD1-218ENST00000478075 BMP6P22004 513 aa4.28□□□□□ -1.72
CALD1-218ENST00000478075 PCBP3P57721 371 aaKnown RBP4.28□□□□□ -1.72
CALD1-218ENST00000478075 PDE3BQ13370 1112 aa4.28□□□□□ -1.72
CALD1-218ENST00000478075 INPP5AQ14642 412 aa4.28□□□□□ -1.72
CALD1-218ENST00000478075 RGL3Q3MIN7 710 aa4.28□□□□□ -1.72
CALD1-218ENST00000478075 ZNF585AQ6P3V2 769 aa4.28□□□□□ -1.72
CALD1-218ENST00000478075 GRIN3AQ8TCU5 1115 aa4.28□□□□□ -1.72
CALD1-218ENST00000478075 MROH6A6NGR9 719 aa4.27□□□□□ -1.73
CALD1-218ENST00000478075 PRKCAP17252 672 aa4.27□□□□□ -1.73
CALD1-218ENST00000478075 R3HDM1Q15032 1099 aaKnown RBP4.27□□□□□ -1.73
CALD1-218ENST00000478075 HSF5Q4G112 596 aaPredicted RBP4.27□□□□□ -1.73
CALD1-218ENST00000478075 B3GNT8Q7Z7M8 397 aa4.27□□□□□ -1.73
CALD1-218ENST00000478075 PROSER2Q86WR7 435 aaPredicted RBP4.27□□□□□ -1.73
CALD1-218ENST00000478075 FCRL2Q96LA5 508 aaPredicted RBP4.27□□□□□ -1.73
CALD1-218ENST00000478075 MTMR7Q9Y216 660 aa4.27□□□□□ -1.73
CALD1-218ENST00000478075 AKAP2Q9Y2D5 859 aa4.27□□□□□ -1.73
CALD1-218ENST00000478075 A0A1W2PQ45 241 aaPredicted RBP4.26□□□□□ -1.73
CALD1-218ENST00000478075 A0A1W2PQY0 241 aa4.26□□□□□ -1.73
CALD1-218ENST00000478075 GRK4P32298 578 aa4.26□□□□□ -1.73
CALD1-218ENST00000478075 HS1BP3Q53T59 392 aa4.26□□□□□ -1.73
CALD1-218ENST00000478075 TMEM164Q5U3C3 297 aa4.26□□□□□ -1.73
CALD1-218ENST00000478075 SYTL5Q8TDW5 730 aaPredicted RBP4.26□□□□□ -1.73
CALD1-218ENST00000478075 ACSL6Q9UKU0 697 aa4.26□□□□□ -1.73
CALD1-218ENST00000478075 SMARCA5O60264 1052 aaPredicted RBP4.25□□□□□ -1.73
CALD1-218ENST00000478075 ATF2P15336 505 aa4.25□□□□□ -1.73
CALD1-218ENST00000478075 PAQR3Q6TCH7 311 aa4.25□□□□□ -1.73
CALD1-218ENST00000478075 NUP43Q8NFH3 380 aa4.25□□□□□ -1.73
CALD1-218ENST00000478075 TMEM87BQ96K49 555 aa4.25□□□□□ -1.73
CALD1-218ENST00000478075 ASPNQ9BXN1 380 aa4.25□□□□□ -1.73
CALD1-218ENST00000478075 CCDC87Q9NVE4 849 aa4.25□□□□□ -1.73
CALD1-218ENST00000478075 NLRP2Q9NX02 1062 aa4.25□□□□□ -1.73
CALD1-218ENST00000478075 FADS2P1A8MWK0 482 aa4.24□□□□□ -1.73
CALD1-218ENST00000478075 CYBBP04839 570 aa4.24□□□□□ -1.73
CALD1-218ENST00000478075 CTGFP29279 349 aa4.24□□□□□ -1.73
CALD1-218ENST00000478075 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
CALD1-218ENST00000478075 WIPI1Q5MNZ9 446 aaPredicted RBP4.24□□□□□ -1.73
CALD1-218ENST00000478075 FNBP4Q8N3X1 1017 aaPredicted RBP4.24□□□□□ -1.73
CALD1-218ENST00000478075 TCFL5Q9UL49 500 aa4.24□□□□□ -1.73
CALD1-218ENST00000478075 SRGAP3O43295 1099 aa4.23□□□□□ -1.73
CALD1-218ENST00000478075 MRPS21P82921 87 aaKnown RBP4.23□□□□□ -1.73
CALD1-218ENST00000478075 PDE4BQ07343 736 aa4.23□□□□□ -1.73
CALD1-218ENST00000478075 ZNF655Q8N720 491 aaPredicted RBP4.23□□□□□ -1.73
CALD1-218ENST00000478075 LINC00116Q8NCU8 138 aa4.23□□□□□ -1.73
CALD1-218ENST00000478075 CYB5D2Q8WUJ1 264 aa4.23□□□□□ -1.73
CALD1-218ENST00000478075 PPP4R1LQ9P1A2 415 aa4.23□□□□□ -1.73
CALD1-218ENST00000478075 PPM1HQ9ULR3 514 aa4.23□□□□□ -1.73
CALD1-218ENST00000478075 ATG7O95352 703 aa4.22□□□□□ -1.73
CALD1-218ENST00000478075 FKBP4Q02790 459 aaKnown RBP eCLIP4.22□□□□□ -1.73
CALD1-218ENST00000478075 EPHA10Q5JZY3 1008 aa4.22□□□□□ -1.73
CALD1-218ENST00000478075 DAGLBQ8NCG7 672 aa4.22□□□□□ -1.73
CALD1-218ENST00000478075 ZNF503Q96F45 646 aa4.22□□□□□ -1.73
CALD1-218ENST00000478075 DPH2Q9BQC3 489 aaPredicted RBP4.22□□□□□ -1.73
CALD1-218ENST00000478075 FOXP3Q9BZS1 431 aa4.22□□□□□ -1.73
CALD1-218ENST00000478075 PCDH18Q9HCL0 1135 aa4.22□□□□□ -1.73
CALD1-218ENST00000478075 BRPF3Q9ULD4 1205 aa4.22□□□□□ -1.73
CALD1-218ENST00000478075 A0A1W2PQ27 194 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 A0A1W2PQ64 194 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 A0A1W2PQC6 194 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 A0A1W2PQD8 194 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 TMEM82A0PJX8 343 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 PGRP06401 933 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 PRKD1Q15139 912 aaPredicted RBP4.21□□□□□ -1.74
CALD1-218ENST00000478075 RNF207Q6ZRF8 634 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 MCATQ8IVS2 390 aaKnown RBP4.21□□□□□ -1.74
CALD1-218ENST00000478075 USHBP1Q8N6Y0 703 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.21□□□□□ -1.74
CALD1-218ENST00000478075 CSRNP2Q9H175 543 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 TJP2Q9UDY2 1190 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 ADAM30Q9UKF2 790 aa4.21□□□□□ -1.74
CALD1-218ENST00000478075 GPR55Q9Y2T6 319 aaPredicted RBP4.21□□□□□ -1.74
CALD1-218ENST00000478075 A0A1W2PQJ5 194 aa4.2□□□□□ -1.74
CALD1-218ENST00000478075 PATE3B3GLJ2 98 aa4.2□□□□□ -1.74
CALD1-218ENST00000478075 EIF1AYO14602 144 aaKnown RBP4.2□□□□□ -1.74
CALD1-218ENST00000478075 ENC1O14682 589 aa4.2□□□□□ -1.74
CALD1-218ENST00000478075 NARSO43776 548 aaKnown RBP4.2□□□□□ -1.74
CALD1-218ENST00000478075 ZNF623O75123 536 aa4.2□□□□□ -1.74
CALD1-218ENST00000478075 ORC1Q13415 861 aa4.2□□□□□ -1.74
CALD1-218ENST00000478075 MTMR3Q13615 1198 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms