RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 RPUSD2Q8IZ73 545 aaKnown RBP11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 SPC25Q9HBM1 224 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 COPRSQ9NQ92 184 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 MYH1P12882 1939 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 PTPRCP08575 1304 aa11.86□□□□□ -0.51
SMARCB1-206ENST00000477836 FLOT1O75955 427 aa11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 ARID4AP29374 1257 aaPredicted RBP11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 DYNLL1P63167 89 aaKnown RBP11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 GRB10Q13322 594 aa11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 SEPT2Q15019 361 aa11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 GNASQ5JWF2 1037 aa11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 MRPL50Q8N5N7 158 aaKnown RBP11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 ANKS1AQ92625 1134 aa11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 WNT8AQ9H1J5 351 aa11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.85□□□□□ -0.51
SMARCB1-206ENST00000477836 MPHOSPH10O00566 681 aaKnown RBP11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 ARHGEF15O94989 841 aa11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 SNAI1O95863 264 aaPredicted RBP11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 USP5P45974 858 aa11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 TAP1Q03518 808 aa11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 SLFN5Q08AF3 891 aa11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 TTLL4Q14679 1199 aa11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 SCLYQ96I15 445 aa11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 EHD4Q9H223 541 aa11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 SNRKQ9NRH2 765 aa11.84□□□□□ -0.51
SMARCB1-206ENST00000477836 ADCY6O43306 1168 aa11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 DCXO43602 365 aa11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 IL9P15248 144 aa11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 SHMT1P34896 483 aa11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 GJA9P57773 515 aa11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 FOXK2Q01167 660 aa11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 SPICE1Q8N0Z3 855 aa11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 VWCEQ96DN2 955 aa11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 UBE2ZQ9H832 354 aaPredicted RBP11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 COL11A1P12107 1806 aaPredicted RBP11.83□□□□□ -0.52
SMARCB1-206ENST00000477836 MYO15AQ9UKN7 3530 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 COL4A4P53420 1690 aaPredicted RBP11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 LPXNO60711 386 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 KCNA5P22460 613 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 BEX3Q00994 111 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 ACVR2BQ13705 512 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 LEXMQ3ZCV2 418 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 SPRED2Q7Z698 418 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 TTC6Q86TZ1 520 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 RIOX2Q8IUF8 465 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 MSL3Q8N5Y2 521 aaKnown RBP11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 TRPV6Q9H1D0 765 aa11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 UPF3AQ9H1J1 476 aaKnown RBP11.82□□□□□ -0.52
SMARCB1-206ENST00000477836 B4GALT4O60513 344 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 UQCRFS1P1P0C7P4 283 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 STAT3P40763 770 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 PLCD1P51178 756 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 ITGA7Q13683 1181 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 CCDC144BQ3MJ40 725 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 PTCRAQ6ISU1 281 aaPredicted RBP11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 CXCL17Q6UXB2 119 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 HFE2Q6ZVN8 426 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 SLC43A3Q8NBI5 491 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 GDPD5Q8WTR4 605 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 MFSD14AQ96MC6 490 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 SLC9A7Q96T83 725 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 ZNF536O15090 1300 aa11.81□□□□□ -0.52
SMARCB1-206ENST00000477836 BRWD1Q9NSI6 2320 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 KIF28PB7ZC32 967 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 PFKMP08237 780 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 MAMDC4Q6UXC1 1216 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 MIGA1Q8NAN2 632 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 DDX11Q96FC9 970 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 AGBL1Q96MI9 1066 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 LMCD1Q9NZU5 365 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 PARP14Q460N5 1801 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 MYO5AQ9Y4I1 1855 aaKnown RBP11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 DCHS1Q96JQ0 3298 aa11.8□□□□□ -0.52
SMARCB1-206ENST00000477836 ZNF318Q5VUA4 2279 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 CTAGE5O15320 804 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 CYP2E1P05181 493 aaPredicted RBP11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 ACTN1P12814 892 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 CYP7A1P22680 504 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 HERC6Q8IVU3 1022 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 TRMT2AQ8IZ69 625 aaKnown RBP11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 PRSS33Q8NF86 280 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 PHOSPHO2Q8TCD6 241 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 FBXO28Q9NVF7 368 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 ADAMTS5Q9UNA0 930 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 GRIN2DO15399 1336 aa11.79□□□□□ -0.52
SMARCB1-206ENST00000477836 GRXCR2A6NFK2 248 aa11.78□□□□□ -0.52
SMARCB1-206ENST00000477836 VWA5AO00534 786 aa11.78□□□□□ -0.52
SMARCB1-206ENST00000477836 WDR46O15213 610 aaKnown RBP11.78□□□□□ -0.52
SMARCB1-206ENST00000477836 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
SMARCB1-206ENST00000477836 CABYRO75952 493 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms