RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SRP68Q9UHB9 627 aaKnown RBP6.34□□□□□ -1.39
CKS1B-207ENST00000477676 UBR2Q8IWV8 1755 aa6.34□□□□□ -1.4
CKS1B-207ENST00000477676 CNTNAP4Q9C0A0 1308 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 FER1L6Q2WGJ9 1857 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 RPS6KA4O75676 772 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 TOMM70O94826 608 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 EDN3P14138 238 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 MZF1P28698 734 aaPredicted RBP6.33□□□□□ -1.4
CKS1B-207ENST00000477676 TNNT2P45379 298 aaPredicted RBP6.33□□□□□ -1.4
CKS1B-207ENST00000477676 C9orf131Q5VYM1 1079 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 STK11IPQ8N1F8 1099 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
CKS1B-207ENST00000477676 HELQQ8TDG4 1101 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 BSNDQ8WZ55 320 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 NXPE3Q969Y0 559 aa6.33□□□□□ -1.4
CKS1B-207ENST00000477676 COL11A2P13942 1736 aaPredicted RBP6.33□□□□□ -1.4
CKS1B-207ENST00000477676 SIPA1L3O60292 1781 aaPredicted RBP6.32□□□□□ -1.4
CKS1B-207ENST00000477676 ERVV-2B6SEH9 535 aa6.32□□□□□ -1.4
CKS1B-207ENST00000477676 CHRNA5P30532 468 aa6.32□□□□□ -1.4
CKS1B-207ENST00000477676 MESP2Q0VG99 397 aa6.32□□□□□ -1.4
CKS1B-207ENST00000477676 MAP7Q14244 749 aa6.32□□□□□ -1.4
CKS1B-207ENST00000477676 HP1BP3Q5SSJ5 553 aaPredicted RBP6.32□□□□□ -1.4
CKS1B-207ENST00000477676 CILP2Q8IUL8 1156 aa6.32□□□□□ -1.4
CKS1B-207ENST00000477676 NLGN1Q8N2Q7 840 aa6.32□□□□□ -1.4
CKS1B-207ENST00000477676 EDEM1Q92611 657 aa6.32□□□□□ -1.4
CKS1B-207ENST00000477676 RC3H2Q9HBD1 1191 aaKnown RBP6.32□□□□□ -1.4
CKS1B-207ENST00000477676 ZFYVE1Q9HBF4 777 aa6.32□□□□□ -1.4
CKS1B-207ENST00000477676 USP42Q9H9J4 1324 aaKnown RBP6.31□□□□□ -1.4
CKS1B-207ENST00000477676 RNASE1P07998 156 aaKnown RBP6.31□□□□□ -1.4
CKS1B-207ENST00000477676 TM4SF1P30408 202 aa6.31□□□□□ -1.4
CKS1B-207ENST00000477676 CRKLP46109 303 aaKnown RBP6.31□□□□□ -1.4
CKS1B-207ENST00000477676 ZNF530Q6P9A1 599 aaPredicted RBP6.31□□□□□ -1.4
CKS1B-207ENST00000477676 JMYQ8N9B5 988 aa6.31□□□□□ -1.4
CKS1B-207ENST00000477676 FAM84AQ96KN4 292 aa6.31□□□□□ -1.4
CKS1B-207ENST00000477676 SOX17Q9H6I2 414 aaPredicted RBP6.31□□□□□ -1.4
CKS1B-207ENST00000477676 MBNL3Q9NUK0 354 aaKnown RBP6.31□□□□□ -1.4
CKS1B-207ENST00000477676 CCDC87Q9NVE4 849 aa6.31□□□□□ -1.4
CKS1B-207ENST00000477676 ACTL7BQ9Y614 415 aa6.31□□□□□ -1.4
CKS1B-207ENST00000477676 SLX4Q8IY92 1834 aa6.31□□□□□ -1.4
CKS1B-207ENST00000477676 PLEKHG2Q9H7P9 1386 aa6.31□□□□□ -1.4
CKS1B-207ENST00000477676 POLRMTO00411 1230 aaKnown RBP6.3□□□□□ -1.4
CKS1B-207ENST00000477676 FAM13AO94988 1023 aa6.3□□□□□ -1.4
CKS1B-207ENST00000477676 ADH5P11766 374 aa6.3□□□□□ -1.4
CKS1B-207ENST00000477676 RAB6AP20340 208 aa6.3□□□□□ -1.4
CKS1B-207ENST00000477676 FUT4P22083 530 aa6.3□□□□□ -1.4
CKS1B-207ENST00000477676 HMGB2P26583 209 aaKnown RBP6.3□□□□□ -1.4
CKS1B-207ENST00000477676 RFC4P35249 363 aa6.3□□□□□ -1.4
CKS1B-207ENST00000477676 LILRA6Q6PI73 481 aa6.3□□□□□ -1.4
CKS1B-207ENST00000477676 OSMRQ99650 979 aa6.3□□□□□ -1.4
CKS1B-207ENST00000477676 SEMA6CQ9H3T2 930 aa6.3□□□□□ -1.4
CKS1B-207ENST00000477676 CARMIL3Q8ND23 1372 aa6.3□□□□□ -1.4
CKS1B-207ENST00000477676 MRC1P22897 1456 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 ARFGEF2Q9Y6D5 1785 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 PRRG2O14669 202 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 PHACTR2O75167 634 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 PDGFAP04085 211 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 CD8BP10966 210 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 GSTM4Q03013 218 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 OGFOD3Q6PK18 319 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 DNAJC10Q8IXB1 793 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 LGR6Q9HBX8 967 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 C1GALT1Q9NS00 363 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 RNF181Q9P0P0 153 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 SEPT3Q9UH03 358 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 ADAMTS6Q9UKP5 1117 aa6.29□□□□□ -1.4
CKS1B-207ENST00000477676 TNRC18O15417 2968 aaPredicted RBP6.29□□□□□ -1.4
CKS1B-207ENST00000477676 NCANO14594 1321 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 SOS1Q07889 1333 aaPredicted RBP6.28□□□□□ -1.4
CKS1B-207ENST00000477676 ESRRAP11474 423 aaPredicted RBP6.28□□□□□ -1.4
CKS1B-207ENST00000477676 CYP19A1P11511 503 aaPredicted RBP6.28□□□□□ -1.4
CKS1B-207ENST00000477676 IL13P35225 146 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 MTHFSP49914 203 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 FSTL1Q12841 308 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 SLC39A6Q13433 755 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 PLEKHO1Q53GL0 409 aaPredicted RBP6.28□□□□□ -1.4
CKS1B-207ENST00000477676 DALRD3Q5D0E6 543 aaKnown RBP6.28□□□□□ -1.4
CKS1B-207ENST00000477676 USPL1Q5W0Q7 1092 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 SEZ6L2Q6UXD5 910 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 ATCAYQ86WG3 371 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 SNX29Q8TEQ0 813 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 MISP3Q96FF7 219 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 ACSS3Q9H6R3 686 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 PANK3Q9H999 370 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 SCN7AQ01118 1682 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 BCORQ6W2J9 1755 aa6.28□□□□□ -1.4
CKS1B-207ENST00000477676 DYNC1LI2O43237 492 aaPredicted RBP6.27□□□□□ -1.41
CKS1B-207ENST00000477676 NEFLP07196 543 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 HSP90AB1P08238 724 aaKnown RBP6.27□□□□□ -1.41
CKS1B-207ENST00000477676 CFPP27918 469 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 EIF1AXP47813 144 aaKnown RBP6.27□□□□□ -1.41
CKS1B-207ENST00000477676 HNRNPUQ00839 825 aaKnown RBP eCLIP6.27□□□□□ -1.41
CKS1B-207ENST00000477676 NFIXQ14938 502 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 SULT6B1Q6IMI4 303 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 DYMQ7RTS9 669 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 LRRN4CLQ8ND94 238 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 BHLHE22Q8NFJ8 381 aaPredicted RBP6.27□□□□□ -1.41
CKS1B-207ENST00000477676 PI4K2BQ8TCG2 481 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 ASAP3Q8TDY4 903 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 ZKSCAN3Q9BRR0 538 aa6.27□□□□□ -1.41
CKS1B-207ENST00000477676 POLR3GLQ9BT43 218 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms