RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 BTNL9Q6UXG8 535 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 CATSPERGQ6ZRH7 1159 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 FAM160B2Q86V87 743 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 CMTR1Q8N1G2 835 aaKnown RBP18.81■□□□□ 0.6
VHL-203ENST00000477538 SRBD1Q8N5C6 995 aaKnown RBP18.81■□□□□ 0.6
VHL-203ENST00000477538 UBA5Q9GZZ9 404 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 FBXO28Q9NVF7 368 aa18.81■□□□□ 0.6
VHL-203ENST00000477538 CNTNAP5Q8WYK1 1306 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 BTBD19C9JJ37 291 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 PLA2G6O60733 806 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 HOXA7P31268 230 aaPredicted RBP18.8■□□□□ 0.6
VHL-203ENST00000477538 NTRK3Q16288 839 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 SYDE2Q5VT97 1194 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 SAMD1Q6SPF0 538 aaPredicted RBP18.8■□□□□ 0.6
VHL-203ENST00000477538 ANKRD23Q86SG2 305 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 NBPF11Q86T75 865 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 CCDC82Q8N4S0 544 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 SLF1Q9BQI6 1058 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 SPZ1Q9BXG8 430 aa18.8■□□□□ 0.6
VHL-203ENST00000477538 CDKL5O76039 1030 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 IFNAR1P17181 557 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 SMARCA1P28370 1054 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 INHBEP58166 350 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 IRX3P78415 501 aaPredicted RBP18.79■□□□□ 0.6
VHL-203ENST00000477538 SREBF2Q12772 1141 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 CUL4AQ13619 759 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 SLC35G1Q2M3R5 365 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 ADGRF4Q8IZF3 695 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 PRR12Q9ULL5 1215 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 SLC45A1Q9Y2W3 748 aa18.79■□□□□ 0.6
VHL-203ENST00000477538 ZNFX1Q9P2E3 1918 aaKnown RBP18.78■□□□□ 0.6
VHL-203ENST00000477538 WDR33Q9C0J8 1336 aaKnown RBP18.78■□□□□ 0.6
VHL-203ENST00000477538 PDHXO00330 501 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 CYTH3O43739 400 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 AOC2O75106 756 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 CTDNEP1O95476 244 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 OSBPP22059 807 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 KIF23Q02241 960 aaPredicted RBP18.78■□□□□ 0.6
VHL-203ENST00000477538 FUT2Q10981 343 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 COG2Q14746 738 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 FAM43AQ8N2R8 423 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 PRPF38AQ8NAV1 312 aaKnown RBP18.78■□□□□ 0.6
VHL-203ENST00000477538 NSUN7Q8NE18 718 aaKnown RBP18.78■□□□□ 0.6
VHL-203ENST00000477538 KIFC2Q96AC6 838 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 ZIC5Q96T25 663 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 PTPN18Q99952 460 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 LLPHQ9BRT6 129 aaKnown RBP18.78■□□□□ 0.6
VHL-203ENST00000477538 ASCC2Q9H1I8 757 aaPredicted RBP18.78■□□□□ 0.6
VHL-203ENST00000477538 RIOX1Q9H6W3 641 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 VAT1LQ9HCJ6 419 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 PNMA3Q9UL41 463 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 PPP1R9AQ9ULJ8 1098 aa18.78■□□□□ 0.6
VHL-203ENST00000477538 MYPNQ86TC9 1320 aa18.77■□□□□ 0.6
VHL-203ENST00000477538 DSG3P32926 999 aa18.77■□□□□ 0.6
VHL-203ENST00000477538 VEGFBP49765 207 aa18.77■□□□□ 0.6
VHL-203ENST00000477538 PHKBQ93100 1093 aa18.77■□□□□ 0.6
VHL-203ENST00000477538 MGAMO43451 1857 aa18.77■□□□□ 0.6
VHL-203ENST00000477538 PTPDC1A2A3K4 754 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 SPDYE16A6NNV3 312 aaPredicted RBP18.76■□□□□ 0.59
VHL-203ENST00000477538 IGF2BP3O00425 579 aaKnown RBP eCLIP18.76■□□□□ 0.59
VHL-203ENST00000477538 DTNBO60941 627 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 PPFIA3O75145 1194 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 TM4SF4P48230 202 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 SSRP1Q08945 709 aaKnown RBP18.76■□□□□ 0.59
VHL-203ENST00000477538 IFNL1Q8IU54 200 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 TRIM22Q8IYM9 498 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 PIBF1Q8WXW3 757 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 ATG4CQ96DT6 458 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 RRP36Q96EU6 259 aaKnown RBP18.76■□□□□ 0.59
VHL-203ENST00000477538 SLC26A6Q9BXS9 759 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 RNF26Q9BY78 433 aaPredicted RBP18.76■□□□□ 0.59
VHL-203ENST00000477538 JMJD4Q9H9V9 463 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 ZCCHC17Q9NP64 241 aaKnown RBP18.76■□□□□ 0.59
VHL-203ENST00000477538 HOXC10Q9NYD6 342 aa18.76■□□□□ 0.59
VHL-203ENST00000477538 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.76■□□□□ 0.59
VHL-203ENST00000477538 STK36Q9NRP7 1315 aa18.75■□□□□ 0.59
VHL-203ENST00000477538 JAK2O60674 1132 aa18.75■□□□□ 0.59
VHL-203ENST00000477538 FMNL1O95466 1100 aaPredicted RBP18.75■□□□□ 0.59
VHL-203ENST00000477538 HSP90AA1P07900 732 aaKnown RBP18.75■□□□□ 0.59
VHL-203ENST00000477538 AKAP17AQ02040 695 aaKnown RBP18.75■□□□□ 0.59
VHL-203ENST00000477538 CDC37Q16543 378 aaPredicted RBP18.75■□□□□ 0.59
VHL-203ENST00000477538 OTUD7BQ6GQQ9 843 aa18.75■□□□□ 0.59
VHL-203ENST00000477538 HOMER1Q86YM7 354 aa18.75■□□□□ 0.59
VHL-203ENST00000477538 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
VHL-203ENST00000477538 MTMR8Q96EF0 704 aa18.75■□□□□ 0.59
VHL-203ENST00000477538 INTS4Q96HW7 963 aaKnown RBP18.75■□□□□ 0.59
VHL-203ENST00000477538 PIGSQ96S52 555 aa18.75■□□□□ 0.59
VHL-203ENST00000477538 P2RX7Q99572 595 aaKnown RBP18.75■□□□□ 0.59
VHL-203ENST00000477538 RBM27Q9P2N5 1060 aaKnown RBP18.75■□□□□ 0.59
VHL-203ENST00000477538 V9GY48 417 aaPredicted RBP18.75■□□□□ 0.59
VHL-203ENST00000477538 hCG_1642624A0A1W2PR95 340 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 PRPF3O43395 683 aaKnown RBP18.74■□□□□ 0.59
VHL-203ENST00000477538 FDX1P10109 184 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 MAP2K2P36507 400 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 SNAP25P60880 206 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 HERVK_113P62684 666 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 SMARCC2Q8TAQ2 1214 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 DDX11Q96FC9 970 aa18.74■□□□□ 0.59
VHL-203ENST00000477538 PARK7Q99497 189 aaKnown RBP18.74■□□□□ 0.59
VHL-203ENST00000477538 RANBP17Q9H2T7 1088 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms