RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 RIPK3Q9Y572 518 aa13.55□□□□□ -0.24
HDLBP-236ENST00000477477 ZBED4O75132 1171 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 TTLL1O95922 423 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 PGK1P00558 417 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 ZNF865P0CJ78 1059 aaPredicted RBP13.54□□□□□ -0.24
HDLBP-236ENST00000477477 AKR1A1P14550 325 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 MX1P20591 662 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 ZMYM1Q5SVZ6 1142 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 C1orf53Q5VUE5 145 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 RNF180Q86T96 592 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 LRRC47Q8N1G4 583 aaKnown RBP13.54□□□□□ -0.24
HDLBP-236ENST00000477477 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
HDLBP-236ENST00000477477 NEDD1Q8NHV4 660 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 FERMT2Q96AC1 680 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 PDLIM7Q9NR12 457 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 FEM1BQ9UK73 627 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 CNPY2Q9Y2B0 182 aa13.54□□□□□ -0.24
HDLBP-236ENST00000477477 DNAJC25-GNG10A0A024R161 153 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 TSPY3P0CV98 308 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 TSPY8P0CW00 308 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 PDE4BQ07343 736 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 PPARAQ07869 468 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.53□□□□□ -0.24
HDLBP-236ENST00000477477 CPXCR1Q8N123 301 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 SLC17A8Q8NDX2 589 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 KIFC2Q96AC6 838 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 LENG1Q96BZ8 264 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-236ENST00000477477 DDX11Q96FC9 970 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 NAPBQ9H115 298 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 SLC38A10Q9HBR0 1119 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 RAVER2Q9HCJ3 691 aaKnown RBP13.53□□□□□ -0.24
HDLBP-236ENST00000477477 PRDM5Q9NQX1 630 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-236ENST00000477477 MTMR10Q9NXD2 777 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 CTDP1Q9Y5B0 961 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-236ENST00000477477 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 SALL3Q9BXA9 1300 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 LTBP2Q14767 1821 aa13.53□□□□□ -0.24
HDLBP-236ENST00000477477 ADAMTS4O75173 837 aa13.52□□□□□ -0.25
HDLBP-236ENST00000477477 SLC3A2P08195 630 aaKnown RBP13.52□□□□□ -0.25
HDLBP-236ENST00000477477 SLC4A3P48751 1232 aa13.52□□□□□ -0.25
HDLBP-236ENST00000477477 OAZ1P54368 228 aa13.52□□□□□ -0.25
HDLBP-236ENST00000477477 SLFN13Q68D06 897 aa13.52□□□□□ -0.25
HDLBP-236ENST00000477477 MAMDC4Q6UXC1 1216 aa13.52□□□□□ -0.25
HDLBP-236ENST00000477477 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-236ENST00000477477 STXBP5LQ9Y2K9 1186 aa13.52□□□□□ -0.25
HDLBP-236ENST00000477477 A0A1W2PQ45 241 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-236ENST00000477477 A0A1W2PQY0 241 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 TRIM43BA6NCK2 446 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 FOXP2O15409 715 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-236ENST00000477477 BMP3P12645 472 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 RRP1P56182 461 aaKnown RBP13.51□□□□□ -0.25
HDLBP-236ENST00000477477 TFAP4Q01664 338 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 TLE2Q04725 743 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 CCDC129Q6ZRS4 1044 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 SH3RF1Q7Z6J0 888 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 CHST13Q8NET6 341 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 BADQ92934 168 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 TRIM43Q96BQ3 446 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-236ENST00000477477 FGD4Q96M96 766 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 FBXO40Q9UH90 709 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-236ENST00000477477 FAM184BQ9ULE4 1060 aa13.51□□□□□ -0.25
HDLBP-236ENST00000477477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDLBP-236ENST00000477477 LAMA2P24043 3122 aaKnown RBP13.51□□□□□ -0.25
HDLBP-236ENST00000477477 SYNRGQ9UMZ2 1314 aa13.5□□□□□ -0.25
HDLBP-236ENST00000477477 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
HDLBP-236ENST00000477477 FDX1P10109 184 aa13.5□□□□□ -0.25
HDLBP-236ENST00000477477 STAT2P52630 851 aa13.5□□□□□ -0.25
HDLBP-236ENST00000477477 FAM109BQ6ICB4 259 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-236ENST00000477477 ANKRD35Q8N283 1001 aa13.5□□□□□ -0.25
HDLBP-236ENST00000477477 GMCL1Q96IK5 515 aa13.5□□□□□ -0.25
HDLBP-236ENST00000477477 TSEN34Q9BSV6 310 aaKnown RBP13.5□□□□□ -0.25
HDLBP-236ENST00000477477 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-236ENST00000477477 ZNFX1Q9P2E3 1918 aaKnown RBP13.5□□□□□ -0.25
HDLBP-236ENST00000477477 PLXNA1Q9UIW2 1896 aa13.5□□□□□ -0.25
HDLBP-236ENST00000477477 MOXD2PA6NHM9 499 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 TMEM232C9JQI7 657 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 DUSP11O75319 330 aaKnown RBP13.49□□□□□ -0.25
HDLBP-236ENST00000477477 CLTBP09497 229 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 SLC1A4P43007 532 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 ACLYP53396 1101 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 SHHQ15465 462 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 PPP4R3BQ5MIZ7 849 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 C9orf50Q5SZB4 431 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 ANKRD45Q5TZF3 282 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 FAM160B2Q86V87 743 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 KLHDC9Q8NEP7 349 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 ISY1Q9ULR0 285 aaKnown RBP13.49□□□□□ -0.25
HDLBP-236ENST00000477477 TACC3Q9Y6A5 838 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 MYH4Q9Y623 1939 aa13.49□□□□□ -0.25
HDLBP-236ENST00000477477 TSPY2A6NKD2 308 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 PQBP1O60828 265 aaKnown RBP13.48□□□□□ -0.25
HDLBP-236ENST00000477477 ITGB8P26012 769 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 CTDSPL2Q05D32 466 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 VPS53Q5VIR6 699 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 CCSAPQ6IQ19 270 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-236ENST00000477477 ARMCX2Q7L311 632 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 CHURC1Q8WUH1 139 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms