RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 TINF2Q9BSI4 451 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 PBX4Q9BYU1 374 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 ARMT1Q9H993 441 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 TMEM39AQ9NV64 488 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 TBX21Q9UL17 535 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 ZNF214Q9UL59 606 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-204ENST00000477429 EXOC6BQ9Y2D4 811 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 RIPK3Q9Y572 518 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 ZNFX1Q9P2E3 1918 aaKnown RBP11.86□□□□□ -0.51
COL4A5-204ENST00000477429 COL11A1P12107 1806 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-204ENST00000477429 ZNF532Q9HCE3 1301 aa11.86□□□□□ -0.51
COL4A5-204ENST00000477429 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-204ENST00000477429 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-204ENST00000477429 ACRP10323 421 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 RARBP10826 455 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 FCER1AP12319 257 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 ACLYP53396 1101 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 TMEM240Q5SV17 173 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 RASIP1Q5U651 963 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 ANKRD33Q7Z3H0 272 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 AACSQ86V21 672 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 KLHDC9Q8NEP7 349 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 TIFAQ96CG3 184 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 FGD4Q96M96 766 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 NUP88Q99567 741 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-204ENST00000477429 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL4A5-204ENST00000477429 VCPKMTQ9H867 229 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 IL1RAPL2Q9NP60 686 aa11.85□□□□□ -0.51
COL4A5-204ENST00000477429 VWA5AO00534 786 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 CTAGE5O15320 804 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 CSF2RAP15509 400 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 CDK7P50613 346 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 ICA1Q05084 483 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 CCDC85BQ15834 202 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-204ENST00000477429 KCNA10Q16322 511 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 SLC9C2Q5TAH2 1124 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 RIOX2Q8IUF8 465 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 MB21D1Q8N884 522 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-204ENST00000477429 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 CXXC1Q9P0U4 656 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-204ENST00000477429 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
COL4A5-204ENST00000477429 UMODL1Q5DID0 1318 aa11.84□□□□□ -0.51
COL4A5-204ENST00000477429 CFAP47Q6ZTR5 3102 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 ROBO3Q96MS0 1386 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 IPO8O15397 1037 aaKnown RBP11.83□□□□□ -0.52
COL4A5-204ENST00000477429 IGSF3O75054 1194 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 TIMP1P01033 207 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 EEF2P13639 858 aaKnown RBP11.83□□□□□ -0.52
COL4A5-204ENST00000477429 CDK8P49336 464 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 FAM83BQ5T0W9 1011 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 RNF180Q86T96 592 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 FBXL18Q96ME1 805 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 CRNKL1Q9BZJ0 848 aaKnown RBP11.83□□□□□ -0.52
COL4A5-204ENST00000477429 YBX2Q9Y2T7 364 aaKnown RBP11.83□□□□□ -0.52
COL4A5-204ENST00000477429 PLXNA1Q9UIW2 1896 aa11.83□□□□□ -0.52
COL4A5-204ENST00000477429 SETXQ7Z333 2677 aaKnown RBP11.82□□□□□ -0.52
COL4A5-204ENST00000477429 DNAJC25-GNG10A0A024R161 153 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 GOLIM4O00461 696 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 WDR46O15213 610 aaKnown RBP11.82□□□□□ -0.52
COL4A5-204ENST00000477429 AKR1A1P14550 325 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 STAT3P40763 770 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 MFSD5Q6N075 450 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 ZNF365Q70YC5 407 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 IL27Q8NEV9 243 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 PPP1R12CQ9BZL4 782 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 STARD7Q9NQZ5 370 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 PPP1R9AQ9ULJ8 1098 aa11.82□□□□□ -0.52
COL4A5-204ENST00000477429 ST18O60284 1047 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 MBD4O95243 580 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 SLC25A27O95847 323 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 MYOGP15173 224 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 CYP2C18P33260 490 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 KCTD2Q14681 263 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 TMEM63BQ5T3F8 832 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 C12orf60Q5U649 245 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 ZKSCAN2Q63HK3 967 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 CERS3Q8IU89 383 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 TOX2Q96NM4 488 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
COL4A5-204ENST00000477429 TSEN34Q9BSV6 310 aaKnown RBP11.81□□□□□ -0.52
COL4A5-204ENST00000477429 KATNBL1Q9H079 304 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 NKX2-4Q9H2Z4 354 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 SLC5A4Q9NY91 659 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 NRBP1Q9UHY1 535 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 ZHX1Q9UKY1 873 aaPredicted RBP11.81□□□□□ -0.52
COL4A5-204ENST00000477429 DIS3Q9Y2L1 958 aaKnown RBP11.81□□□□□ -0.52
COL4A5-204ENST00000477429 BAZ2AQ9UIF9 1905 aaKnown RBP11.81□□□□□ -0.52
COL4A5-204ENST00000477429 ASTN1O14525 1302 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 MYO9BQ13459 2157 aa11.81□□□□□ -0.52
COL4A5-204ENST00000477429 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-204ENST00000477429 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-204ENST00000477429 DCDC2CA8MYV0 355 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 USP17L12C9JPN9 530 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 USP17L21D6R901 530 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 APBB1O00213 710 aa11.8□□□□□ -0.52
COL4A5-204ENST00000477429 ASGR1P07306 291 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms