RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 MFSD6Q6ZSS7 791 aa18.4■□□□□ 0.54
COMMD6-209ENST00000477377 CHMP4CQ96CF2 233 aa18.4■□□□□ 0.54
COMMD6-209ENST00000477377 TMEM47Q9BQJ4 181 aa18.4■□□□□ 0.54
COMMD6-209ENST00000477377 OGDHLQ9ULD0 1010 aa18.4■□□□□ 0.54
COMMD6-209ENST00000477377 ZNFX1Q9P2E3 1918 aaKnown RBP18.4■□□□□ 0.54
COMMD6-209ENST00000477377 TMEM232C9JQI7 657 aa18.39■□□□□ 0.53
COMMD6-209ENST00000477377 TFRCP02786 760 aaKnown RBP18.39■□□□□ 0.53
COMMD6-209ENST00000477377 CYP2C19P33261 490 aa18.39■□□□□ 0.53
COMMD6-209ENST00000477377 PTH1RQ03431 593 aa18.39■□□□□ 0.53
COMMD6-209ENST00000477377 PRPF38BQ5VTL8 546 aaKnown RBP18.39■□□□□ 0.53
COMMD6-209ENST00000477377 OLFML2BQ68BL8 750 aa18.39■□□□□ 0.53
COMMD6-209ENST00000477377 DIS3LQ8TF46 1054 aaKnown RBP18.39■□□□□ 0.53
COMMD6-209ENST00000477377 KIFC2Q96AC6 838 aa18.39■□□□□ 0.53
COMMD6-209ENST00000477377 CWC22Q9HCG8 908 aaKnown RBP18.39■□□□□ 0.53
COMMD6-209ENST00000477377 ZNF536O15090 1300 aa18.39■□□□□ 0.53
COMMD6-209ENST00000477377 LAMA4Q16363 1823 aa18.39■□□□□ 0.53
COMMD6-209ENST00000477377 CAPN2P17655 700 aa18.38■□□□□ 0.53
COMMD6-209ENST00000477377 SLC1A4P43007 532 aa18.38■□□□□ 0.53
COMMD6-209ENST00000477377 ZNF792Q3KQV3 632 aa18.38■□□□□ 0.53
COMMD6-209ENST00000477377 PPP4R3BQ5MIZ7 849 aa18.38■□□□□ 0.53
COMMD6-209ENST00000477377 KCTD1Q719H9 257 aa18.38■□□□□ 0.53
COMMD6-209ENST00000477377 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.38■□□□□ 0.53
COMMD6-209ENST00000477377 DPP9Q86TI2 863 aa18.38■□□□□ 0.53
COMMD6-209ENST00000477377 TEX13BQ9BXU2 312 aa18.38■□□□□ 0.53
COMMD6-209ENST00000477377 RAVER2Q9HCJ3 691 aaKnown RBP18.38■□□□□ 0.53
COMMD6-209ENST00000477377 TOMM22Q9NS69 142 aa18.38■□□□□ 0.53
COMMD6-209ENST00000477377 FARP2O94887 1054 aaPredicted RBP18.37■□□□□ 0.53
COMMD6-209ENST00000477377 PGK2P07205 417 aa18.37■□□□□ 0.53
COMMD6-209ENST00000477377 FCER1AP12319 257 aa18.37■□□□□ 0.53
COMMD6-209ENST00000477377 CYBAP13498 195 aa18.37■□□□□ 0.53
COMMD6-209ENST00000477377 SNRNP48Q6IEG0 339 aaKnown RBP18.37■□□□□ 0.53
COMMD6-209ENST00000477377 TTBK2Q6IQ55 1244 aa18.37■□□□□ 0.53
COMMD6-209ENST00000477377 CPXCR1Q8N123 301 aa18.37■□□□□ 0.53
COMMD6-209ENST00000477377 MAML3Q96JK9 1138 aa18.37■□□□□ 0.53
COMMD6-209ENST00000477377 TTC14Q96N46 770 aa18.37■□□□□ 0.53
COMMD6-209ENST00000477377 MMP19Q99542 508 aa18.37■□□□□ 0.53
COMMD6-209ENST00000477377 RAD50Q92878 1312 aa18.37■□□□□ 0.53
COMMD6-209ENST00000477377 DNAJC25-GNG10A0A024R161 153 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 SGSM2O43147 1006 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 ZBED4O75132 1171 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 SNHG28P0DPA3 235 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 TOP1P11387 765 aaKnown RBP18.36■□□□□ 0.53
COMMD6-209ENST00000477377 STAT2P52630 851 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 OAZ1P54368 228 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 MFSD14CQ5VZR4 134 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 BTNL9Q6UXG8 535 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 FAM160B2Q86V87 743 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 ANKS1AQ92625 1134 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 ZKSCAN3Q9BRR0 538 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 RNF41Q9H4P4 317 aaPredicted RBP18.36■□□□□ 0.53
COMMD6-209ENST00000477377 ZSWIM5Q9P217 1185 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 PRR12Q9ULL5 1215 aa18.36■□□□□ 0.53
COMMD6-209ENST00000477377 B4E1Z4 1266 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 PDHBP11177 359 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 COPB2P35606 906 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 SNAP25P60880 206 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 PRAMEF19Q5SWL8 479 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 CENPQQ7L2Z9 268 aaPredicted RBP18.35■□□□□ 0.53
COMMD6-209ENST00000477377 ANKLE1Q8NAG6 615 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 CHURC1Q8WUH1 139 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 DCAF4Q8WV16 495 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 ESR2Q92731 530 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 PAWRQ96IZ0 340 aaKnown RBP18.35■□□□□ 0.53
COMMD6-209ENST00000477377 FGD4Q96M96 766 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 DIS3Q9Y2L1 958 aaKnown RBP18.35■□□□□ 0.53
COMMD6-209ENST00000477377 TAF6LQ9Y6J9 622 aa18.35■□□□□ 0.53
COMMD6-209ENST00000477377 KDM4AO75164 1064 aa18.34■□□□□ 0.53
COMMD6-209ENST00000477377 FDX1P10109 184 aa18.34■□□□□ 0.53
COMMD6-209ENST00000477377 DGKHQ86XP1 1220 aa18.34■□□□□ 0.53
COMMD6-209ENST00000477377 AGBL1Q96MI9 1066 aa18.34■□□□□ 0.53
COMMD6-209ENST00000477377 CTNNA3Q9UI47 895 aa18.34■□□□□ 0.53
COMMD6-209ENST00000477377 MTMR7Q9Y216 660 aa18.34■□□□□ 0.53
COMMD6-209ENST00000477377 CYP21A2P08686 494 aa18.33■□□□□ 0.52
COMMD6-209ENST00000477377 SLC16A2P36021 539 aa18.33■□□□□ 0.52
COMMD6-209ENST00000477377 NT5C2P49902 561 aa18.33■□□□□ 0.52
COMMD6-209ENST00000477377 KCTD2Q14681 263 aa18.33■□□□□ 0.52
COMMD6-209ENST00000477377 IMMTQ16891 758 aaKnown RBP18.33■□□□□ 0.52
COMMD6-209ENST00000477377 DDX20Q9UHI6 824 aaKnown RBP18.33■□□□□ 0.52
COMMD6-209ENST00000477377 SMCHD1A6NHR9 2005 aa18.33■□□□□ 0.52
COMMD6-209ENST00000477377 PFASO15067 1338 aa18.32■□□□□ 0.52
COMMD6-209ENST00000477377 FRMPD2Q68DX3 1309 aaPredicted RBP18.32■□□□□ 0.52
COMMD6-209ENST00000477377 COL6A1P12109 1028 aa18.32■□□□□ 0.52
COMMD6-209ENST00000477377 TAL1P17542 331 aaPredicted RBP18.32■□□□□ 0.52
COMMD6-209ENST00000477377 CYB5R4Q7L1T6 521 aa18.32■□□□□ 0.52
COMMD6-209ENST00000477377 ENAHQ8N8S7 591 aaPredicted RBP18.32■□□□□ 0.52
COMMD6-209ENST00000477377 CHST13Q8NET6 341 aa18.32■□□□□ 0.52
COMMD6-209ENST00000477377 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
COMMD6-209ENST00000477377 MAP4K1Q92918 833 aa18.32■□□□□ 0.52
COMMD6-209ENST00000477377 RANBP17Q9H2T7 1088 aaKnown RBP18.32■□□□□ 0.52
COMMD6-209ENST00000477377 FRMPD3Q5JV73 1810 aa18.32■□□□□ 0.52
COMMD6-209ENST00000477377 ALPK3Q96L96 1907 aa18.31■□□□□ 0.52
COMMD6-209ENST00000477377 PLXNA1Q9UIW2 1896 aa18.31■□□□□ 0.52
COMMD6-209ENST00000477377 SLC4A3P48751 1232 aa18.31■□□□□ 0.52
COMMD6-209ENST00000477377 ZNF543Q08ER8 600 aa18.31■□□□□ 0.52
COMMD6-209ENST00000477377 SEC23AQ15436 765 aa18.31■□□□□ 0.52
COMMD6-209ENST00000477377 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
COMMD6-209ENST00000477377 ZSCAN10Q96SZ4 725 aaPredicted RBP18.31■□□□□ 0.52
COMMD6-209ENST00000477377 TINF2Q9BSI4 451 aa18.31■□□□□ 0.52
COMMD6-209ENST00000477377 SLC5A4Q9NY91 659 aa18.31■□□□□ 0.52
COMMD6-209ENST00000477377 H0YGN5 161 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms