RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 IRX3P78415 501 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-211ENST00000476994 ANKRD1Q15327 319 aa20.62■□□□□ 0.89
SREBF1-211ENST00000476994 RASGRP2Q7LDG7 609 aa20.62■□□□□ 0.89
SREBF1-211ENST00000476994 ZNF654Q8IZM8 581 aa20.62■□□□□ 0.89
SREBF1-211ENST00000476994 PNMA1Q8ND90 353 aa20.62■□□□□ 0.89
SREBF1-211ENST00000476994 U2AF1L4Q8WU68 220 aaKnown RBP20.62■□□□□ 0.89
SREBF1-211ENST00000476994 SHISA4Q96DD7 197 aa20.62■□□□□ 0.89
SREBF1-211ENST00000476994 RBM19Q9Y4C8 960 aaKnown RBP20.62■□□□□ 0.89
SREBF1-211ENST00000476994 KLF18A0A0U1RQI7 1052 aa20.61■□□□□ 0.89
SREBF1-211ENST00000476994 C19orf81C9J6K1 198 aa20.61■□□□□ 0.89
SREBF1-211ENST00000476994 INHAP05111 366 aa20.61■□□□□ 0.89
SREBF1-211ENST00000476994 SNHG28P0DPA3 235 aa20.61■□□□□ 0.89
SREBF1-211ENST00000476994 ST3GAL1Q11201 340 aa20.61■□□□□ 0.89
SREBF1-211ENST00000476994 SH3D19Q5HYK7 790 aa20.61■□□□□ 0.89
SREBF1-211ENST00000476994 KIAA1755Q5JYT7 1200 aa20.61■□□□□ 0.89
SREBF1-211ENST00000476994 KIAA1683Q9H0B3 1180 aa20.61■□□□□ 0.89
SREBF1-211ENST00000476994 ASCC2Q9H1I8 757 aaPredicted RBP20.61■□□□□ 0.89
SREBF1-211ENST00000476994 ARHGEF10LQ9HCE6 1279 aa20.61■□□□□ 0.89
SREBF1-211ENST00000476994 DDAH1O94760 285 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 SGPL1O95470 568 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 ELNP15502 786 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 PDIA3P30101 505 aaKnown RBP20.6■□□□□ 0.89
SREBF1-211ENST00000476994 RCAN1P53805 252 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 BACE1P56817 501 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 FGD1P98174 961 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 MTMR2Q13614 643 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 ME3Q16798 604 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 GMCL1P1Q8NEA9 526 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 ZNF274Q96GC6 653 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-211ENST00000476994 MYL10Q9BUA6 226 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 UNC93B1Q9H1C4 597 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 KAT14Q9H8E8 782 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 LIMCH1Q9UPQ0 1083 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 NR2E3Q9Y5X4 410 aa20.6■□□□□ 0.89
SREBF1-211ENST00000476994 CCDC69A6NI79 296 aa20.59■□□□□ 0.89
SREBF1-211ENST00000476994 USP17L10C9JJH3 530 aa20.59■□□□□ 0.89
SREBF1-211ENST00000476994 H0YGN5 161 aa20.59■□□□□ 0.89
SREBF1-211ENST00000476994 FARP2O94887 1054 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-211ENST00000476994 TFRCP02786 760 aaKnown RBP20.59■□□□□ 0.89
SREBF1-211ENST00000476994 MCM2P49736 904 aa20.59■□□□□ 0.89
SREBF1-211ENST00000476994 ATP2B2Q01814 1243 aa20.59■□□□□ 0.89
SREBF1-211ENST00000476994 NOL8Q76FK4 1167 aaKnown RBP20.59■□□□□ 0.89
SREBF1-211ENST00000476994 CCAR1Q8IX12 1150 aaKnown RBP20.59■□□□□ 0.89
SREBF1-211ENST00000476994 VCPKMTQ9H867 229 aa20.59■□□□□ 0.89
SREBF1-211ENST00000476994 FAM217BQ9NTX9 383 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-211ENST00000476994 NDUFB10O96000 172 aa20.58■□□□□ 0.89
SREBF1-211ENST00000476994 PDHBP11177 359 aa20.58■□□□□ 0.89
SREBF1-211ENST00000476994 NFXL1Q6ZNB6 911 aa20.58■□□□□ 0.89
SREBF1-211ENST00000476994 RAB11FIP4Q86YS3 637 aa20.58■□□□□ 0.89
SREBF1-211ENST00000476994 C12orf42Q96LP6 360 aa20.58■□□□□ 0.89
SREBF1-211ENST00000476994 MAP3K14Q99558 947 aa20.58■□□□□ 0.89
SREBF1-211ENST00000476994 EMILIN3Q9NT22 766 aa20.58■□□□□ 0.89
SREBF1-211ENST00000476994 SLC12A7Q9Y666 1083 aa20.58■□□□□ 0.89
SREBF1-211ENST00000476994 COL11A1P12107 1806 aaPredicted RBP20.57■□□□□ 0.88
SREBF1-211ENST00000476994 SMCHD1A6NHR9 2005 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 GOLGA8BA8MQT2 603 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 F5H6K3 240 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 ZBTB43O43298 467 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 PFKFB2O60825 505 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 RXRAP19793 462 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 KLRC3Q07444 240 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 GRM4Q14833 912 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 CATIPQ7Z7H3 387 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 MICU3Q86XE3 530 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 TMX3Q96JJ7 454 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 DEFB118Q96PH6 123 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 SH2D4AQ9H788 454 aa20.57■□□□□ 0.88
SREBF1-211ENST00000476994 COLQQ9Y215 455 aaPredicted RBP20.57■□□□□ 0.88
SREBF1-211ENST00000476994 HMGCRP04035 888 aa20.56■□□□□ 0.88
SREBF1-211ENST00000476994 CDC27P30260 824 aa20.56■□□□□ 0.88
SREBF1-211ENST00000476994 HOXA7P31268 230 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-211ENST00000476994 GTF3C2Q8WUA4 911 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-211ENST00000476994 GMCL1Q96IK5 515 aa20.56■□□□□ 0.88
SREBF1-211ENST00000476994 PALM3A6NDB9 673 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-211ENST00000476994 K7ELQ4 463 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-211ENST00000476994 SCRN1Q12765 414 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 SLC35G1Q2M3R5 365 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 SLFN13Q68D06 897 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 DCAF4Q8WV16 495 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 GTF3C6Q969F1 213 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 ZSCAN31Q96LW9 406 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-211ENST00000476994 FEZ1Q99689 392 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 CWC22Q9HCG8 908 aaKnown RBP20.55■□□□□ 0.88
SREBF1-211ENST00000476994 GOPCQ9HD26 462 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 SH2B1Q9NRF2 756 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-211ENST00000476994 MORF4L1Q9UBU8 362 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 MAD2L2Q9UI95 211 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 A0A0G2JMZ2 1700 aa20.55■□□□□ 0.88
SREBF1-211ENST00000476994 CALM1P0DP23 149 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 CALM2P0DP24 149 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 CALM3P0DP25 149 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 USP14P54578 494 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 ZNF543Q08ER8 600 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 ZYXQ15942 572 aaKnown RBP20.54■□□□□ 0.88
SREBF1-211ENST00000476994 USP17L2Q6R6M4 530 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 STAG2Q8N3U4 1231 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 NECAB1Q8N987 351 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 FANCBQ8NB91 859 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 GPRC5AQ8NFJ5 357 aa20.54■□□□□ 0.88
SREBF1-211ENST00000476994 NUP133Q8WUM0 1156 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms