RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 A0A087X0B3 334 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 ARHGAP6O43182 974 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 DPYDQ12882 1025 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 SPATA1Q5VX52 437 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 SPECC1LQ69YQ0 1117 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 SLF2Q8IX21 1173 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 PNMA1Q8ND90 353 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 MKNK2Q9HBH9 465 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-208ENST00000476724 ZSCAN12O43309 604 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 GRM4Q14833 912 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 GALNT17Q6IS24 598 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 PIK3AP1Q6ZUJ8 805 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 TTLL6Q8N841 843 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 ERO1AQ96HE7 468 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 INTS13Q9NVM9 706 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 SUGT1Q9Y2Z0 365 aa18.67■□□□□ 0.58
TMEM53-208ENST00000476724 VWA3AA6NCI4 1184 aa18.66■□□□□ 0.58
TMEM53-208ENST00000476724 TMEM232C9JQI7 657 aa18.66■□□□□ 0.58
TMEM53-208ENST00000476724 BLIDQ8IZY5 108 aa18.66■□□□□ 0.58
TMEM53-208ENST00000476724 ZNF444Q8N0Y2 327 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-208ENST00000476724 IL17RBQ9NRM6 502 aa18.66■□□□□ 0.58
TMEM53-208ENST00000476724 CGNQ9P2M7 1197 aaKnown RBP18.66■□□□□ 0.58
TMEM53-208ENST00000476724 PCDHA4Q9UN74 947 aa18.66■□□□□ 0.58
TMEM53-208ENST00000476724 FLT1P17948 1338 aa18.66■□□□□ 0.58
TMEM53-208ENST00000476724 WNT7AO00755 349 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 STX10O60499 249 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 AFMP43652 599 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 CTAGE1Q96RT6 745 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 SLU7O95391 586 aaKnown RBP18.65■□□□□ 0.58
TMEM53-208ENST00000476724 TSPY3P0CV98 308 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 TSPY8P0CW00 308 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 LONP1P36776 959 aaKnown RBP18.65■□□□□ 0.58
TMEM53-208ENST00000476724 NR1I3Q14994 352 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 SLC44A5Q8NCS7 719 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 CCDC148Q8NFR7 591 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 MED15Q96RN5 788 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 LZTS2Q9BRK4 669 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 L2HGDHQ9H9P8 463 aa18.65■□□□□ 0.58
TMEM53-208ENST00000476724 A0A1B0GTH6 734 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 GOLGA6L9A6NEM1 432 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 ETF1P62495 437 aaKnown RBP18.64■□□□□ 0.57
TMEM53-208ENST00000476724 CUL4BQ13620 913 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 NOM1Q5C9Z4 860 aaKnown RBP18.64■□□□□ 0.57
TMEM53-208ENST00000476724 PPP4R3BQ5MIZ7 849 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 DACT2Q5SW24 774 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 CC2D2BQ6DHV5 1058 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 TRMT44Q8IYL2 757 aaKnown RBP18.64■□□□□ 0.57
TMEM53-208ENST00000476724 PLCG2P16885 1265 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 E2F4Q16254 413 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 STRIP1Q5VSL9 837 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 HOMER1Q86YM7 354 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 KIAA0825Q8IV33 1275 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 DAGLBQ8NCG7 672 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 BAG1Q99933 345 aaPredicted RBP18.64■□□□□ 0.57
TMEM53-208ENST00000476724 SAMSN1Q9NSI8 373 aaKnown RBP18.64■□□□□ 0.57
TMEM53-208ENST00000476724 PCDHAC2Q9Y5I4 1007 aa18.64■□□□□ 0.57
TMEM53-208ENST00000476724 PHLPP2Q6ZVD8 1323 aa18.63■□□□□ 0.57
TMEM53-208ENST00000476724 SYNRGQ9UMZ2 1314 aa18.63■□□□□ 0.57
TMEM53-208ENST00000476724 PPIP5K2O43314 1243 aa18.63■□□□□ 0.57
TMEM53-208ENST00000476724 MCM7P33993 719 aa18.63■□□□□ 0.57
TMEM53-208ENST00000476724 TXLNAP40222 546 aa18.63■□□□□ 0.57
TMEM53-208ENST00000476724 SYT10Q6XYQ8 523 aa18.63■□□□□ 0.57
TMEM53-208ENST00000476724 TMEM139Q8IV31 216 aa18.63■□□□□ 0.57
TMEM53-208ENST00000476724 BAZ2BQ9UIF8 2168 aaKnown RBP18.63■□□□□ 0.57
TMEM53-208ENST00000476724 YDJCA8MPS7 323 aa18.62■□□□□ 0.57
TMEM53-208ENST00000476724 GTPBP6O43824 516 aaPredicted RBP18.62■□□□□ 0.57
TMEM53-208ENST00000476724 PICALMQ13492 652 aa18.62■□□□□ 0.57
TMEM53-208ENST00000476724 R3HDM1Q15032 1099 aaKnown RBP18.62■□□□□ 0.57
TMEM53-208ENST00000476724 FEZ1Q99689 392 aa18.62■□□□□ 0.57
TMEM53-208ENST00000476724 MAD2L2Q9UI95 211 aa18.62■□□□□ 0.57
TMEM53-208ENST00000476724 ZNF215Q9UL58 517 aaPredicted RBP18.62■□□□□ 0.57
TMEM53-208ENST00000476724 PPP1R3GB7ZBB8 358 aa18.62■□□□□ 0.57
TMEM53-208ENST00000476724 CCDC93Q567U6 631 aa18.62■□□□□ 0.57
TMEM53-208ENST00000476724 TC2NQ8N9U0 490 aa18.62■□□□□ 0.57
TMEM53-208ENST00000476724 DDX4Q9NQI0 724 aaKnown RBP18.62■□□□□ 0.57
TMEM53-208ENST00000476724 RMND1Q9NWS8 449 aa18.62■□□□□ 0.57
TMEM53-208ENST00000476724 COL4A5P29400 1685 aa18.62■□□□□ 0.57
TMEM53-208ENST00000476724 USP17L3A6NCW0 530 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 USP17L4A6NCW7 530 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 CRKP46108 304 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 FILIP1LQ4L180 1135 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 HSP90AA4PQ58FG1 418 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 CDKAL1Q5VV42 579 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 PDXDC2PQ6P474 469 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 USP17L1Q7RTZ2 530 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 REXO1L1PQ8IX06 675 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 C4orf32Q8N8J7 132 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 SUPT20HQ8NEM7 779 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 PSME4Q14997 1843 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 CCDC194A0A1B0GVG4 234 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 PALM3A6NDB9 673 aaPredicted RBP18.61■□□□□ 0.57
TMEM53-208ENST00000476724 M0R2N6 131 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 LAD1O00515 517 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 VEGFAP15692 232 aaPredicted RBP18.61■□□□□ 0.57
TMEM53-208ENST00000476724 CD44P16070 742 aaKnown RBP18.61■□□□□ 0.57
TMEM53-208ENST00000476724 SEMA3FQ13275 785 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 APOBEC3HQ6NTF7 200 aaKnown RBP18.61■□□□□ 0.57
TMEM53-208ENST00000476724 HHIPL2Q6UWX4 724 aa18.61■□□□□ 0.57
TMEM53-208ENST00000476724 STAG2Q8N3U4 1231 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms