RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 PRAMEF19Q5SWL8 479 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 SLFN13Q68D06 897 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 LRRC47Q8N1G4 583 aaKnown RBP12.81□□□□□ -0.36
SEC13-214ENST00000476597 SLC38A10Q9HBR0 1119 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 RIPK3Q9Y572 518 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
SEC13-214ENST00000476597 DNAH12Q6ZR08 3092 aa12.81□□□□□ -0.36
SEC13-214ENST00000476597 TSPY2A6NKD2 308 aa12.8□□□□□ -0.36
SEC13-214ENST00000476597 SEPT4O43236 478 aa12.8□□□□□ -0.36
SEC13-214ENST00000476597 HSPD1P10809 573 aaKnown RBP12.8□□□□□ -0.36
SEC13-214ENST00000476597 SDSP20132 328 aa12.8□□□□□ -0.36
SEC13-214ENST00000476597 SNRNP48Q6IEG0 339 aaKnown RBP12.8□□□□□ -0.36
SEC13-214ENST00000476597 ZNF589Q86UQ0 364 aaPredicted RBP12.8□□□□□ -0.36
SEC13-214ENST00000476597 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
SEC13-214ENST00000476597 RILPL2Q969X0 211 aa12.8□□□□□ -0.36
SEC13-214ENST00000476597 KIFC2Q96AC6 838 aa12.8□□□□□ -0.36
SEC13-214ENST00000476597 TINF2Q9BSI4 451 aa12.8□□□□□ -0.36
SEC13-214ENST00000476597 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
SEC13-214ENST00000476597 TMEM232C9JQI7 657 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 RANBP6O60518 1105 aaKnown RBP12.79□□□□□ -0.36
SEC13-214ENST00000476597 NMT2O60551 498 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 PLA2G6O60733 806 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 FDX1P10109 184 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 MCCP23508 829 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 OAZ1P54368 228 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.79□□□□□ -0.36
SEC13-214ENST00000476597 CPXCR1Q8N123 301 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 ARRDC4Q8NCT1 418 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 CHURC1Q8WUH1 139 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 STAG1Q8WVM7 1258 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 GMCL1Q96IK5 515 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
SEC13-214ENST00000476597 RAVER2Q9HCJ3 691 aaKnown RBP12.79□□□□□ -0.36
SEC13-214ENST00000476597 STX8Q9UNK0 236 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 CTDP1Q9Y5B0 961 aaPredicted RBP12.79□□□□□ -0.36
SEC13-214ENST00000476597 GREB1LQ9C091 1923 aaPredicted RBP12.79□□□□□ -0.36
SEC13-214ENST00000476597 A0A0G2JMZ2 1700 aa12.79□□□□□ -0.36
SEC13-214ENST00000476597 LAMA3Q16787 3333 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 DNM1LO00429 736 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 SLC1A4P43007 532 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 LRRC26Q2I0M4 334 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 FAM160B2Q86V87 743 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 GDF15Q99988 308 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 TCP11L1Q9NUJ3 509 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 PCDH10Q9P2E7 1040 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 ZMYND8Q9ULU4 1186 aaPredicted RBP12.78□□□□□ -0.36
SEC13-214ENST00000476597 ZMYM6O95789 1325 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 CCDC171Q6TFL3 1326 aa12.78□□□□□ -0.36
SEC13-214ENST00000476597 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.37
SEC13-214ENST00000476597 A0A1W2PPC1 479 aa12.77□□□□□ -0.37
SEC13-214ENST00000476597 ZNF865P0CJ78 1059 aaPredicted RBP12.77□□□□□ -0.37
SEC13-214ENST00000476597 TAL1P17542 331 aaPredicted RBP12.77□□□□□ -0.37
SEC13-214ENST00000476597 BMP8BP34820 402 aa12.77□□□□□ -0.37
SEC13-214ENST00000476597 SLC4A3P48751 1232 aa12.77□□□□□ -0.37
SEC13-214ENST00000476597 STAT2P52630 851 aa12.77□□□□□ -0.37
SEC13-214ENST00000476597 MFAP1P55081 439 aaKnown RBP12.77□□□□□ -0.37
SEC13-214ENST00000476597 GJC2Q5T442 439 aaPredicted RBP12.77□□□□□ -0.37
SEC13-214ENST00000476597 ANO1Q5XXA6 986 aa12.77□□□□□ -0.37
SEC13-214ENST00000476597 MAMDC4Q6UXC1 1216 aa12.77□□□□□ -0.37
SEC13-214ENST00000476597 MSL3Q8N5Y2 521 aaKnown RBP12.77□□□□□ -0.37
SEC13-214ENST00000476597 CHST13Q8NET6 341 aa12.77□□□□□ -0.37
SEC13-214ENST00000476597 FBXO40Q9UH90 709 aa12.77□□□□□ -0.37
SEC13-214ENST00000476597 ZNF236Q9UL36 1845 aa12.76□□□□□ -0.37
SEC13-214ENST00000476597 PCP11498 1178 aaKnown RBP12.76□□□□□ -0.37
SEC13-214ENST00000476597 SYN1P17600 705 aa12.76□□□□□ -0.37
SEC13-214ENST00000476597 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
SEC13-214ENST00000476597 KCTD1Q719H9 257 aa12.76□□□□□ -0.37
SEC13-214ENST00000476597 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
SEC13-214ENST00000476597 TOMM22Q9NS69 142 aa12.76□□□□□ -0.37
SEC13-214ENST00000476597 ZNF536O15090 1300 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 SNAI1O95863 264 aaPredicted RBP12.75□□□□□ -0.37
SEC13-214ENST00000476597 MYH8P13535 1937 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 HAND2P61296 217 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 LRRC41Q15345 812 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
SEC13-214ENST00000476597 CWC27Q6UX04 472 aaKnown RBP12.75□□□□□ -0.37
SEC13-214ENST00000476597 MFSD6Q6ZSS7 791 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 ZNF467Q7Z7K2 595 aaPredicted RBP12.75□□□□□ -0.37
SEC13-214ENST00000476597 ANKRD35Q8N283 1001 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 AGBL1Q96MI9 1066 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 TTC14Q96N46 770 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 SYNGAP1Q96PV0 1343 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 TMEM47Q9BQJ4 181 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 ISY1Q9ULR0 285 aaKnown RBP12.75□□□□□ -0.37
SEC13-214ENST00000476597 CNPY2Q9Y2B0 182 aa12.75□□□□□ -0.37
SEC13-214ENST00000476597 KBTBD13C9JR72 458 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 HIP1O00291 1037 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 ZNF213O14771 459 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 RARBP10826 455 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 TOP1P11387 765 aaKnown RBP12.74□□□□□ -0.37
SEC13-214ENST00000476597 AKR1A1P14550 325 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 PDE4AP27815 886 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 MAGEA10P43363 369 aaPredicted RBP12.74□□□□□ -0.37
SEC13-214ENST00000476597 ATN1P54259 1190 aaPredicted RBP12.74□□□□□ -0.37
SEC13-214ENST00000476597 IKQ13123 557 aaPredicted RBP12.74□□□□□ -0.37
SEC13-214ENST00000476597 TKFCQ3LXA3 575 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 BTNL9Q6UXG8 535 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms