RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 GUCY1B3Q02153 619 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 NUCB1Q02818 461 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 GNL2Q13823 731 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 HIC1Q14526 733 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 PDIA6Q15084 440 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 WHAMMP3Q1A5X7 153 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 MAP7D1Q3KQU3 841 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 TUBB8Q3ZCM7 444 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 PPP1R15BQ5SWA1 713 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 BEND6Q5SZJ8 279 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 RNF187Q5TA31 235 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 CREB3L3Q68CJ9 461 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 PRPF40BQ6NWY9 871 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 USP48Q86UV5 1035 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 FAM228AQ86W67 206 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CCDC144CPQ8IYA2 1237 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 SLC7A5P1Q8MH63 180 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 STK11IPQ8N1F8 1099 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CLASRPQ8N2M8 674 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 GABPB2Q8TAK5 448 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 SMARCC2Q8TAQ2 1214 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 PRR7Q8TB68 274 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 PANK1Q8TE04 598 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 GOLGA1Q92805 767 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 L3MBTL2Q969R5 705 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CLIP3Q96DZ5 547 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 MPP4Q96JB8 637 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 PAGR1Q9BTK6 254 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 INO80BQ9C086 356 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 NAT10Q9H0A0 1025 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 ALG2Q9H553 416 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 RPAP3Q9H6T3 665 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 ZFATQ9P243 1243 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 WDR35Q9P2L0 1181 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 PNMA3Q9UL41 463 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 KDM5CP41229 1560 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CAMSAP2Q08AD1 1489 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CCDC69A6NI79 296 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 ABLIM1O14639 778 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 N4BP1O75113 896 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 LDHAP00338 332 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 TSPY4P0CV99 314 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 TSPY10P0CW01 314 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 NDUFV2P19404 249 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 ENPP1P22413 925 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 ALDH3A1P30838 453 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 TCF7P36402 384 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 PSMC4P43686 418 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 IRAK1P51617 712 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CSE1LP55060 971 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 GSDMDP57764 484 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 ETF1P62495 437 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 TUBB4BP68371 445 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 LRP8Q14114 963 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CNGA3Q16281 694 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 USH1GQ495M9 461 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 TMEM259Q4ZIN3 620 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 BMP2KLQ5H9B9 411 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 NBPF14Q5TI25 921 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 NUTM2DQ5VT03 806 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 CYB5D1Q6P9G0 228 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 SLC15A3Q8IY34 581 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 ZGPATQ8N5A5 531 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 TEX9Q8N6V9 391 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 WDR66Q8TBY9 1149 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 BCAS4Q8TDM0 211 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 NSMCE1Q8WV22 266 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 MAIP1Q8WWC4 291 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 SMARCC1Q92922 1105 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 GCC1Q96CN9 775 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 OPTNQ96CV9 577 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 HVCN1Q96D96 273 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 TBC1D31Q96DN5 1066 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 PPP1R13BQ96KQ4 1090 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 ZMAT2Q96NC0 199 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 UBE2OQ9C0C9 1292 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 CCDC68Q9H2F9 335 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 ANO2Q9NQ90 1003 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 C6orf203Q9P0P8 240 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 ZMAT5Q9UDW3 170 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 CIDEBQ9UHD4 219 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 C15orf41Q9Y2V0 281 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 TOP2AP11388 1531 aaKnown RBP4.62□□□□□ -1.67
CD55-208ENST00000476590 TCOF1Q13428 1488 aaKnown RBP4.62□□□□□ -1.67
CD55-208ENST00000476590 PPIP5K1Q6PFW1 1433 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 ERBINQ96RT1 1412 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 DYTNA2CJ06 578 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 TARSL2A2RTX5 802 aaKnown RBP4.62□□□□□ -1.67
CD55-208ENST00000476590 LRRD1A4D1F6 860 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 BIN1O00499 593 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 BUB1BO60566 1050 aaPredicted RBP4.62□□□□□ -1.67
CD55-208ENST00000476590 URI1O94763 535 aaPredicted RBP4.62□□□□□ -1.67
CD55-208ENST00000476590 GFPT2O94808 682 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 NPTXRO95502 500 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 TUBBP07437 444 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 HSD3B2P26439 372 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 ATICP31939 592 aa4.62□□□□□ -1.67
CD55-208ENST00000476590 MATR3P43243 847 aaKnown RBP eCLIP4.62□□□□□ -1.671e-6■■■■□ 24.2
CD55-208ENST00000476590 AARSP49588 968 aaKnown RBP eCLIP4.62□□□□□ -1.674e-6■■■■□ 24
CD55-208ENST00000476590 CTCFP49711 727 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms