RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 TAL1P17542 331 aaPredicted RBP12.53□□□□□ -0.4
PGK1-203ENST00000476531 KCNA4P22459 653 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 CDK8P49336 464 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 EPHB4P54760 987 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 CACNB1Q02641 598 aaPredicted RBP12.53□□□□□ -0.4
PGK1-203ENST00000476531 ZNF792Q3KQV3 632 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 MAFAQ8NHW3 353 aaPredicted RBP12.53□□□□□ -0.4
PGK1-203ENST00000476531 MYLIPQ8WY64 445 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
PGK1-203ENST00000476531 MMP19Q99542 508 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 ESYT1Q9BSJ8 1104 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 SH2D4AQ9H788 454 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 XPNPEP3Q9NQH7 507 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 ROBO3Q96MS0 1386 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
PGK1-203ENST00000476531 KIAA0355O15063 1070 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 MBD4O95243 580 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 PGK1P00558 417 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 PGK2P07205 417 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 RARBP10826 455 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 ADD2P35612 726 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 C12orf60Q5U649 245 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
PGK1-203ENST00000476531 CWC27Q6UX04 472 aaKnown RBP12.52□□□□□ -0.41
PGK1-203ENST00000476531 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 C16orf86Q6ZW13 317 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 RIOX2Q8IUF8 465 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 REPS2Q8NFH8 660 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 CCDC17Q96LX7 622 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 TINF2Q9BSI4 451 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 ATP8A2Q9NTI2 1148 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 DIS3Q9Y2L1 958 aaKnown RBP12.52□□□□□ -0.41
PGK1-203ENST00000476531 CDH23Q9H251 3354 aa12.52□□□□□ -0.41
PGK1-203ENST00000476531 A0A1W2PQ45 241 aaPredicted RBP12.51□□□□□ -0.41
PGK1-203ENST00000476531 A0A1W2PQY0 241 aa12.51□□□□□ -0.41
PGK1-203ENST00000476531 M0R2C6 588 aa12.51□□□□□ -0.41
PGK1-203ENST00000476531 VWA5AO00534 786 aa12.51□□□□□ -0.41
PGK1-203ENST00000476531 CLTBP09497 229 aa12.51□□□□□ -0.41
PGK1-203ENST00000476531 ZNF865P0CJ78 1059 aaPredicted RBP12.51□□□□□ -0.41
PGK1-203ENST00000476531 EEF2P13639 858 aaKnown RBP12.51□□□□□ -0.41
PGK1-203ENST00000476531 RNF180Q86T96 592 aa12.51□□□□□ -0.41
PGK1-203ENST00000476531 ZNF589Q86UQ0 364 aaPredicted RBP12.51□□□□□ -0.41
PGK1-203ENST00000476531 LENG1Q96BZ8 264 aaPredicted RBP12.51□□□□□ -0.41
PGK1-203ENST00000476531 DIAPH3Q9NSV4 1193 aa12.51□□□□□ -0.41
PGK1-203ENST00000476531 ZNF214Q9UL59 606 aaPredicted RBP12.51□□□□□ -0.41
PGK1-203ENST00000476531 PPP1R9AQ9ULJ8 1098 aa12.51□□□□□ -0.41
PGK1-203ENST00000476531 TACC3Q9Y6A5 838 aa12.51□□□□□ -0.41
PGK1-203ENST00000476531 USP17L12C9JPN9 530 aa12.5□□□□□ -0.41
PGK1-203ENST00000476531 USP17L21D6R901 530 aa12.5□□□□□ -0.41
PGK1-203ENST00000476531 RNF113AO15541 343 aaKnown RBP12.5□□□□□ -0.41
PGK1-203ENST00000476531 SGSM2O43147 1006 aa12.5□□□□□ -0.41
PGK1-203ENST00000476531 ADAMTS4O75173 837 aa12.5□□□□□ -0.41
PGK1-203ENST00000476531 STAT3P40763 770 aa12.5□□□□□ -0.41
PGK1-203ENST00000476531 KCTD2Q14681 263 aa12.5□□□□□ -0.41
PGK1-203ENST00000476531 RNPC3Q96LT9 517 aaKnown RBP12.5□□□□□ -0.41
PGK1-203ENST00000476531 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
PGK1-203ENST00000476531 KANSL2Q9H9L4 492 aa12.5□□□□□ -0.41
PGK1-203ENST00000476531 COL11A1P12107 1806 aaPredicted RBP12.49□□□□□ -0.41
PGK1-203ENST00000476531 TMEM265A0A087WTH1 108 aa12.49□□□□□ -0.41
PGK1-203ENST00000476531 PQBP1O60828 265 aaKnown RBP12.49□□□□□ -0.41
PGK1-203ENST00000476531 AKR1A1P14550 325 aa12.49□□□□□ -0.41
PGK1-203ENST00000476531 FOSL2P15408 326 aa12.49□□□□□ -0.41
PGK1-203ENST00000476531 ZMYM1Q5SVZ6 1142 aa12.49□□□□□ -0.41
PGK1-203ENST00000476531 FAM83BQ5T0W9 1011 aa12.49□□□□□ -0.41
PGK1-203ENST00000476531 OSBP2Q969R2 916 aa12.49□□□□□ -0.41
PGK1-203ENST00000476531 TSEN34Q9BSV6 310 aaKnown RBP12.49□□□□□ -0.41
PGK1-203ENST00000476531 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
PGK1-203ENST00000476531 MYH8P13535 1937 aa12.49□□□□□ -0.41
PGK1-203ENST00000476531 ZNFX1Q9P2E3 1918 aaKnown RBP12.49□□□□□ -0.41
PGK1-203ENST00000476531 BAZ2AQ9UIF9 1905 aaKnown RBP12.49□□□□□ -0.41
PGK1-203ENST00000476531 SYNRGQ9UMZ2 1314 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 RAG1P15918 1043 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 COPB2P35606 906 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 PTH1RQ03431 593 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 FPGSQ05932 587 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 FAAP100Q0VG06 881 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 UBE3CQ15386 1083 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 CCSAPQ6IQ19 270 aaPredicted RBP12.48□□□□□ -0.41
PGK1-203ENST00000476531 CTR9Q6PD62 1173 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 CASC1Q6TDU7 716 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 ANKRD33Q7Z3H0 272 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 KLHDC9Q8NEP7 349 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 SYMPKQ92797 1274 aaKnown RBP12.48□□□□□ -0.41
PGK1-203ENST00000476531 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.48□□□□□ -0.41
PGK1-203ENST00000476531 LSG1Q9H089 658 aaKnown RBP12.48□□□□□ -0.41
PGK1-203ENST00000476531 PUS7LQ9H0K6 701 aaKnown RBP12.48□□□□□ -0.41
PGK1-203ENST00000476531 GOPCQ9HD26 462 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 TMEM39AQ9NV64 488 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
PGK1-203ENST00000476531 DNAJC25-GNG10A0A024R161 153 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 SNAI1O95863 264 aaPredicted RBP12.47□□□□□ -0.41
PGK1-203ENST00000476531 COL9A1P20849 921 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 ACLYP53396 1101 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 GRIN2CQ14957 1233 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 AMOTL1Q8IY63 956 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 MSL3Q8N5Y2 521 aaKnown RBP12.47□□□□□ -0.41
PGK1-203ENST00000476531 TOX2Q96NM4 488 aa12.47□□□□□ -0.41
PGK1-203ENST00000476531 NUP88Q99567 741 aaPredicted RBP12.47□□□□□ -0.41
PGK1-203ENST00000476531 SLF1Q9BQI6 1058 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms