RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 BTBD7Q9P203 1132 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 PPP1R9AQ9ULJ8 1098 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 MYPNQ86TC9 1320 aa16.84■□□□□ 0.29
CCNL1-217ENST00000476367 CTGFP29279 349 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 NEK4P51957 841 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 STAT2P52630 851 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 SLC35G1Q2M3R5 365 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 LBX2Q6XYB7 198 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 BRF1Q92994 677 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 HPS5Q9UPZ3 1129 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 RABGAP1Q9Y3P9 1069 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 TRIM17Q9Y577 477 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 PLXNB2O15031 1838 aa16.83■□□□□ 0.28
CCNL1-217ENST00000476367 CNMDO75829 334 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 PSMC4P43686 418 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 AK2P54819 239 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 APOBRQ0VD83 1088 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 PLS1Q14651 629 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 APOA5Q6Q788 366 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 GPRC5AQ8NFJ5 357 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 FAM217BQ9NTX9 383 aaPredicted RBP16.82■□□□□ 0.28
CCNL1-217ENST00000476367 PDRG1Q9NUG6 133 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 FEM1BQ9UK73 627 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 MYH6P13533 1939 aa16.82■□□□□ 0.28
CCNL1-217ENST00000476367 FMNL1O95466 1100 aaPredicted RBP16.81■□□□□ 0.28
CCNL1-217ENST00000476367 GOLGA8HP0CJ92 632 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
CCNL1-217ENST00000476367 RAB11FIP4Q86YS3 637 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 ZNF654Q8IZM8 581 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 STAG2Q8N3U4 1231 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 TRIM47Q96LD4 638 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 EFCC1Q9HA90 598 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 CENPFP49454 3210 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 VWA5AO00534 786 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 TNPO2O14787 897 aaKnown RBP16.81■□□□□ 0.28
CCNL1-217ENST00000476367 RXRAP19793 462 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 SLC16A2P36021 539 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 HTTP42858 3142 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 FCGRTP55899 365 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 ZNF543Q08ER8 600 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 Q3C1V9 767 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 WDR78Q5VTH9 848 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 TTBK2Q6IQ55 1244 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 CCAR1Q8IX12 1150 aaKnown RBP16.81■□□□□ 0.28
CCNL1-217ENST00000476367 MB21D1Q8N884 522 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 PRPF38AQ8NAV1 312 aaKnown RBP16.81■□□□□ 0.28
CCNL1-217ENST00000476367 PORCNQ9H237 461 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 TPCN1Q9ULQ1 816 aa16.81■□□□□ 0.28
CCNL1-217ENST00000476367 LARGE1O95461 756 aa16.8■□□□□ 0.28
CCNL1-217ENST00000476367 NFXL1Q6ZNB6 911 aa16.8■□□□□ 0.28
CCNL1-217ENST00000476367 FAM160B2Q86V87 743 aa16.8■□□□□ 0.28
CCNL1-217ENST00000476367 TMTC2Q8N394 836 aa16.8■□□□□ 0.28
CCNL1-217ENST00000476367 CHURC1Q8WUH1 139 aa16.8■□□□□ 0.28
CCNL1-217ENST00000476367 CPVLQ9H3G5 476 aa16.8■□□□□ 0.28
CCNL1-217ENST00000476367 CWC22Q9HCG8 908 aaKnown RBP16.8■□□□□ 0.28
CCNL1-217ENST00000476367 CTDP1Q9Y5B0 961 aaPredicted RBP16.8■□□□□ 0.28
CCNL1-217ENST00000476367 PALM3A6NDB9 673 aaPredicted RBP16.79■□□□□ 0.28
CCNL1-217ENST00000476367 CCNA1P78396 465 aa16.79■□□□□ 0.28
CCNL1-217ENST00000476367 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
CCNL1-217ENST00000476367 ARHGEF6Q15052 776 aa16.79■□□□□ 0.28
CCNL1-217ENST00000476367 RABEP1Q15276 862 aa16.79■□□□□ 0.28
CCNL1-217ENST00000476367 NBPF11Q86T75 865 aa16.79■□□□□ 0.28
CCNL1-217ENST00000476367 SPATC1LQ9H0A9 340 aa16.79■□□□□ 0.28
CCNL1-217ENST00000476367 ADAMTS5Q9UNA0 930 aa16.79■□□□□ 0.28
CCNL1-217ENST00000476367 NID2Q14112 1375 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 KLF18A0A0U1RQI7 1052 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 CCDC69A6NI79 296 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 PARP1P09874 1014 aaKnown RBP16.78■□□□□ 0.28
CCNL1-217ENST00000476367 PDIA3P30101 505 aaKnown RBP16.78■□□□□ 0.28
CCNL1-217ENST00000476367 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 SNAP25P60880 206 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 ST3GAL1Q11201 340 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 GRM4Q14833 912 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 GPATCH4Q5T3I0 446 aaKnown RBP16.78■□□□□ 0.28
CCNL1-217ENST00000476367 CPXCR1Q8N123 301 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 REPS2Q8NFH8 660 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 NUP133Q8WUM0 1156 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 MOV10L1Q9BXT6 1211 aaKnown RBP16.78■□□□□ 0.28
CCNL1-217ENST00000476367 PRR12Q9ULL5 1215 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 CYTH3O43739 400 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 ZBED4O75132 1171 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 CDC27P30260 824 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 FGD1P98174 961 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 ASPRV1Q53RT3 343 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 SYDE2Q5VT97 1194 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 CATIPQ7Z7H3 387 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 MAP3K14Q99558 947 aa16.78■□□□□ 0.28
CCNL1-217ENST00000476367 RAVER2Q9HCJ3 691 aaKnown RBP16.78■□□□□ 0.28
CCNL1-217ENST00000476367 ZNF214Q9UL59 606 aaPredicted RBP16.78■□□□□ 0.28
CCNL1-217ENST00000476367 PLA2G6O60733 806 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 DDAH1O94760 285 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 MAPK4P31152 587 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 PRKCZQ05513 592 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 FUT2Q10981 343 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 ME3Q16798 604 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 SNRNP48Q6IEG0 339 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms