RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SLC1A4P43007 532 aa24.99■■□□□ 1.59
LIME1-204ENST00000476183 DPP9Q86TI2 863 aa24.99■■□□□ 1.59
LIME1-204ENST00000476183 ABRAQ8N0Z2 381 aa24.99■■□□□ 1.59
LIME1-204ENST00000476183 RAD50Q92878 1312 aa24.99■■□□□ 1.59
LIME1-204ENST00000476183 RNF41Q9H4P4 317 aaPredicted RBP24.99■■□□□ 1.59
LIME1-204ENST00000476183 SLC38A10Q9HBR0 1119 aa24.99■■□□□ 1.59
LIME1-204ENST00000476183 RIPK3Q9Y572 518 aa24.99■■□□□ 1.59
LIME1-204ENST00000476183 CCND3P30281 292 aaPredicted RBP24.98■■□□□ 1.59
LIME1-204ENST00000476183 SNRNP48Q6IEG0 339 aaKnown RBP24.98■■□□□ 1.59
LIME1-204ENST00000476183 RCSD1Q6JBY9 416 aa24.98■■□□□ 1.59
LIME1-204ENST00000476183 KCTD1Q719H9 257 aa24.98■■□□□ 1.59
LIME1-204ENST00000476183 CENPQQ7L2Z9 268 aaPredicted RBP24.98■■□□□ 1.59
LIME1-204ENST00000476183 TMEM47Q9BQJ4 181 aa24.98■■□□□ 1.59
LIME1-204ENST00000476183 TEX13BQ9BXU2 312 aa24.98■■□□□ 1.59
LIME1-204ENST00000476183 ISY1Q9ULR0 285 aaKnown RBP24.98■■□□□ 1.59
LIME1-204ENST00000476183 MTMR7Q9Y216 660 aa24.98■■□□□ 1.59
LIME1-204ENST00000476183 ATP2A1O14983 1001 aa24.97■■□□□ 1.59
LIME1-204ENST00000476183 ZBED4O75132 1171 aa24.97■■□□□ 1.59
LIME1-204ENST00000476183 FCER1AP12319 257 aa24.97■■□□□ 1.59
LIME1-204ENST00000476183 CPXCR1Q8N123 301 aa24.97■■□□□ 1.59
LIME1-204ENST00000476183 RAVER2Q9HCJ3 691 aaKnown RBP24.97■■□□□ 1.59
LIME1-204ENST00000476183 FARP2O94887 1054 aaPredicted RBP24.96■■□□□ 1.59
LIME1-204ENST00000476183 TOP1P11387 765 aaKnown RBP24.96■■□□□ 1.59
LIME1-204ENST00000476183 CYP2C19P33261 490 aa24.96■■□□□ 1.59
LIME1-204ENST00000476183 STAT2P52630 851 aa24.96■■□□□ 1.59
LIME1-204ENST00000476183 PTH1RQ03431 593 aa24.96■■□□□ 1.59
LIME1-204ENST00000476183 IMMTQ16891 758 aaKnown RBP24.96■■□□□ 1.59
LIME1-204ENST00000476183 MFSD14CQ5VZR4 134 aa24.96■■□□□ 1.59
LIME1-204ENST00000476183 ESR2Q92731 530 aa24.96■■□□□ 1.59
LIME1-204ENST00000476183 MMP19Q99542 508 aa24.96■■□□□ 1.59
LIME1-204ENST00000476183 CTNNA3Q9UI47 895 aa24.96■■□□□ 1.59
LIME1-204ENST00000476183 CEP290O15078 2479 aa24.96■■□□□ 1.59
LIME1-204ENST00000476183 PGK2P07205 417 aa24.95■■□□□ 1.58
LIME1-204ENST00000476183 COPB2P35606 906 aa24.95■■□□□ 1.58
LIME1-204ENST00000476183 OLFML2BQ68BL8 750 aa24.95■■□□□ 1.58
LIME1-204ENST00000476183 FAM160B2Q86V87 743 aa24.95■■□□□ 1.58
LIME1-204ENST00000476183 CHURC1Q8WUH1 139 aa24.95■■□□□ 1.58
LIME1-204ENST00000476183 RUFY2Q8WXA3 655 aa24.95■■□□□ 1.58
LIME1-204ENST00000476183 ZKSCAN3Q9BRR0 538 aa24.95■■□□□ 1.58
LIME1-204ENST00000476183 SGSM2O43147 1006 aa24.94■■□□□ 1.58
LIME1-204ENST00000476183 PLA2G6O60733 806 aa24.94■■□□□ 1.58
LIME1-204ENST00000476183 KDM4AO75164 1064 aa24.94■■□□□ 1.58
LIME1-204ENST00000476183 PRPF38BQ5VTL8 546 aaKnown RBP24.94■■□□□ 1.58
LIME1-204ENST00000476183 TRPV1Q8NER1 839 aa24.94■■□□□ 1.58
LIME1-204ENST00000476183 DCAF4Q8WV16 495 aa24.94■■□□□ 1.58
LIME1-204ENST00000476183 CTDP1Q9Y5B0 961 aaPredicted RBP24.94■■□□□ 1.58
LIME1-204ENST00000476183 B4E1Z4 1266 aa24.93■■□□□ 1.58
LIME1-204ENST00000476183 CAPN2P17655 700 aa24.93■■□□□ 1.58
LIME1-204ENST00000476183 SLC4A3P48751 1232 aa24.93■■□□□ 1.58
LIME1-204ENST00000476183 MNX1P50219 401 aaPredicted RBP24.93■■□□□ 1.58
LIME1-204ENST00000476183 IKQ13123 557 aaPredicted RBP24.93■■□□□ 1.58
LIME1-204ENST00000476183 KCTD2Q14681 263 aa24.93■■□□□ 1.58
LIME1-204ENST00000476183 LHX8Q68G74 356 aa24.93■■□□□ 1.58
LIME1-204ENST00000476183 DIS3LQ8TF46 1054 aaKnown RBP24.93■■□□□ 1.58
LIME1-204ENST00000476183 MAML3Q96JK9 1138 aa24.93■■□□□ 1.58
LIME1-204ENST00000476183 TTC14Q96N46 770 aa24.93■■□□□ 1.58
LIME1-204ENST00000476183 OGDHLQ9ULD0 1010 aa24.93■■□□□ 1.58
LIME1-204ENST00000476183 ZNF536O15090 1300 aa24.92■■□□□ 1.58
LIME1-204ENST00000476183 PLXNA1Q9UIW2 1896 aa24.92■■□□□ 1.58
LIME1-204ENST00000476183 OAZ1P54368 228 aa24.92■■□□□ 1.58
LIME1-204ENST00000476183 SNAP25P60880 206 aa24.92■■□□□ 1.58
LIME1-204ENST00000476183 CCDC96Q2M329 555 aa24.92■■□□□ 1.58
LIME1-204ENST00000476183 ZNF792Q3KQV3 632 aa24.92■■□□□ 1.58
LIME1-204ENST00000476183 TTBK2Q6IQ55 1244 aa24.92■■□□□ 1.58
LIME1-204ENST00000476183 SLC5A4Q9NY91 659 aa24.92■■□□□ 1.58
LIME1-204ENST00000476183 PRR12Q9ULL5 1215 aa24.92■■□□□ 1.58
LIME1-204ENST00000476183 FDX1P10109 184 aa24.91■■□□□ 1.58
LIME1-204ENST00000476183 CYBAP13498 195 aa24.91■■□□□ 1.58
LIME1-204ENST00000476183 PAWRQ96IZ0 340 aaKnown RBP24.91■■□□□ 1.58
LIME1-204ENST00000476183 ZSWIM5Q9P217 1185 aa24.91■■□□□ 1.58
LIME1-204ENST00000476183 FRMPD2Q68DX3 1309 aaPredicted RBP24.9■■□□□ 1.58
LIME1-204ENST00000476183 PDHBP11177 359 aa24.9■■□□□ 1.58
LIME1-204ENST00000476183 NT5C2P49902 561 aa24.9■■□□□ 1.58
LIME1-204ENST00000476183 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.9■■□□□ 1.58
LIME1-204ENST00000476183 DGKHQ86XP1 1220 aa24.9■■□□□ 1.58
LIME1-204ENST00000476183 AGBL1Q96MI9 1066 aa24.9■■□□□ 1.58
LIME1-204ENST00000476183 FRMPD3Q5JV73 1810 aa24.9■■□□□ 1.58
LIME1-204ENST00000476183 SLC16A2P36021 539 aa24.89■■□□□ 1.58
LIME1-204ENST00000476183 BTNL9Q6UXG8 535 aa24.89■■□□□ 1.58
LIME1-204ENST00000476183 ANKLE1Q8NAG6 615 aa24.89■■□□□ 1.58
LIME1-204ENST00000476183 GPCPD1Q9NPB8 672 aa24.89■■□□□ 1.58
LIME1-204ENST00000476183 TAF6LQ9Y6J9 622 aa24.89■■□□□ 1.58
LIME1-204ENST00000476183 SMCHD1A6NHR9 2005 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 CYP21A2P08686 494 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 SNHG28P0DPA3 235 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 PRAMEF19Q5SWL8 479 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 CCDC174Q6PII3 467 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 IQCA1Q86XH1 822 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 CHST13Q8NET6 341 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 ANKS1AQ92625 1134 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 ZSCAN10Q96SZ4 725 aaPredicted RBP24.88■■□□□ 1.57
LIME1-204ENST00000476183 KRT23Q9C075 422 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 HOMER2Q9NSB8 354 aa24.88■■□□□ 1.57
LIME1-204ENST00000476183 DIS3Q9Y2L1 958 aaKnown RBP24.88■■□□□ 1.57
LIME1-204ENST00000476183 DNAJC25-GNG10A0A024R161 153 aa24.87■■□□□ 1.57
LIME1-204ENST00000476183 TAL1P17542 331 aaPredicted RBP24.87■■□□□ 1.57
LIME1-204ENST00000476183 CNGA1P29973 690 aa24.87■■□□□ 1.57
LIME1-204ENST00000476183 ZNF543Q08ER8 600 aa24.87■■□□□ 1.57
LIME1-204ENST00000476183 ENAHQ8N8S7 591 aaPredicted RBP24.87■■□□□ 1.57
LIME1-204ENST00000476183 CNNM2Q9H8M5 875 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms