RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 TSPY3P0CV98 308 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 TSPY8P0CW00 308 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 HDAC1Q13547 482 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-208ENST00000476061 PRAMEF19Q5SWL8 479 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 SNRNP48Q6IEG0 339 aaKnown RBP11.79□□□□□ -0.52
PTPN7-208ENST00000476061 MAMDC4Q6UXC1 1216 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 OTUD7AQ8TE49 926 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-208ENST00000476061 EVI5LQ96CN4 794 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 NUP88Q99567 741 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-208ENST00000476061 SLC38A10Q9HBR0 1119 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 PRKAG2Q9UGJ0 569 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 FBXO40Q9UH90 709 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 SYNGAP1Q96PV0 1343 aa11.79□□□□□ -0.52
PTPN7-208ENST00000476061 ZNF865P0CJ78 1059 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-208ENST00000476061 RARBP10826 455 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 BMP3P12645 472 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 AKR1A1P14550 325 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 RTP1P59025 263 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 TFAP4Q01664 338 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 LRRC41Q15345 812 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 CHST13Q8NET6 341 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 DDX11Q96FC9 970 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 LRCH3Q96II8 777 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 GMCL1Q96IK5 515 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 LBHD1Q9BQE6 289 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-208ENST00000476061 XPNPEP3Q9NQH7 507 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 HELLSQ9NRZ9 838 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 ANAPC4Q9UJX5 808 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 PHF24Q9UPV7 400 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 CNPY2Q9Y2B0 182 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 RIPK3Q9Y572 518 aa11.78□□□□□ -0.52
PTPN7-208ENST00000476061 FOXP2O15409 715 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 PLA2G6O60733 806 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 FGRP09769 529 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 NOVP48745 357 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-208ENST00000476061 FAM47AQ5JRC9 791 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 ANO1Q5XXA6 986 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 SLFN13Q68D06 897 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 RNF180Q86T96 592 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 FAM160B2Q86V87 743 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTPN7-208ENST00000476061 CTDP1Q9Y5B0 961 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-208ENST00000476061 MCM3APO60318 1980 aa11.77□□□□□ -0.53
PTPN7-208ENST00000476061 ADAMTS4O75173 837 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 SNAI1O95863 264 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-208ENST00000476061 ADCYAP1R1P41586 468 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 STAT2P52630 851 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 PDE1AP54750 535 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 MDM2Q00987 491 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-208ENST00000476061 ALX1Q15699 326 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 CPXCR1Q8N123 301 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 LRRC47Q8N1G4 583 aaKnown RBP11.76□□□□□ -0.53
PTPN7-208ENST00000476061 CHURC1Q8WUH1 139 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 STAG1Q8WVM7 1258 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 KIFC2Q96AC6 838 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
PTPN7-208ENST00000476061 RAVER2Q9HCJ3 691 aaKnown RBP11.76□□□□□ -0.53
PTPN7-208ENST00000476061 FAM184BQ9ULE4 1060 aa11.76□□□□□ -0.53
PTPN7-208ENST00000476061 TSPY2A6NKD2 308 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 ORC4O43929 436 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 TAL1P17542 331 aaPredicted RBP11.75□□□□□ -0.53
PTPN7-208ENST00000476061 SLC1A4P43007 532 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 TKFCQ3LXA3 575 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 ANKRD35Q8N283 1001 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 ABHD16BQ9H3Z7 469 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 IL17RBQ9NRM6 502 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 ATP11BQ9Y2G3 1177 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 ZMYM6O95789 1325 aa11.75□□□□□ -0.53
PTPN7-208ENST00000476061 MOXD2PA6NHM9 499 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 TMEM232C9JQI7 657 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 DUSP11O75319 330 aaKnown RBP11.74□□□□□ -0.53
PTPN7-208ENST00000476061 CST5P28325 142 aaPredicted RBP11.74□□□□□ -0.53
PTPN7-208ENST00000476061 TRIM60Q495X7 471 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 MCMDC2Q4G0Z9 681 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
PTPN7-208ENST00000476061 CCDC129Q6ZRS4 1044 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 KLHDC9Q8NEP7 349 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 ACAD9Q9H845 621 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 PDLIM7Q9NR12 457 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 STX8Q9UNK0 236 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 ZNF536O15090 1300 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 LRRC37A2A6NM11 1700 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 LAMA4Q16363 1823 aa11.74□□□□□ -0.53
PTPN7-208ENST00000476061 A0A1W2PQ45 241 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-208ENST00000476061 A0A1W2PQY0 241 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 PGK1P00558 417 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-208ENST00000476061 LCTP09848 1927 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 PCP11498 1178 aaKnown RBP11.73□□□□□ -0.53
PTPN7-208ENST00000476061 NT5C2P49902 561 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 NKX3-2P78367 333 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 CTDSPL2Q05D32 466 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 ACVR2BQ13705 512 aa11.73□□□□□ -0.53
PTPN7-208ENST00000476061 VPS53Q5VIR6 699 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms