RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 SH3RF1Q7Z6J0 888 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 STK11IPQ8N1F8 1099 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 TRIM43Q96BQ3 446 aaPredicted RBP12.95□□□□□ -0.34
CDRT1-205ENST00000475944 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
CDRT1-205ENST00000475944 TSEN34Q9BSV6 310 aaKnown RBP12.95□□□□□ -0.34
CDRT1-205ENST00000475944 FAM184BQ9ULE4 1060 aa12.95□□□□□ -0.34
CDRT1-205ENST00000475944 ATP2A1O14983 1001 aa12.94□□□□□ -0.34
CDRT1-205ENST00000475944 ZBED4O75132 1171 aa12.94□□□□□ -0.34
CDRT1-205ENST00000475944 NDUFB10O96000 172 aa12.94□□□□□ -0.34
CDRT1-205ENST00000475944 TDO2P48775 406 aa12.94□□□□□ -0.34
CDRT1-205ENST00000475944 LRRFIP1Q32MZ4 808 aaKnown RBP12.94□□□□□ -0.34
CDRT1-205ENST00000475944 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDRT1-205ENST00000475944 ZNF444Q8N0Y2 327 aaPredicted RBP12.94□□□□□ -0.34
CDRT1-205ENST00000475944 NUP133Q8WUM0 1156 aa12.94□□□□□ -0.34
CDRT1-205ENST00000475944 CLIP2Q9UDT6 1046 aa12.94□□□□□ -0.34
CDRT1-205ENST00000475944 SYNPO2Q9UMS6 1093 aa12.94□□□□□ -0.34
CDRT1-205ENST00000475944 DNAJC25-GNG10A0A024R161 153 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 MOXD2PA6NHM9 499 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 KIAA0355O15063 1070 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 RNF113AO15541 343 aaKnown RBP12.93□□□□□ -0.34
CDRT1-205ENST00000475944 GPAA1O43292 621 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 PQBP1O60828 265 aaKnown RBP12.93□□□□□ -0.34
CDRT1-205ENST00000475944 ADAMTS4O75173 837 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 APPP05067 770 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 RAG1P15918 1043 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 C20orf194Q5TEA3 1177 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 MAMDC4Q6UXC1 1216 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 ZNF467Q7Z7K2 595 aaPredicted RBP12.93□□□□□ -0.34
CDRT1-205ENST00000475944 CPXCR1Q8N123 301 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 KIFC2Q96AC6 838 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 LENG1Q96BZ8 264 aaPredicted RBP12.93□□□□□ -0.34
CDRT1-205ENST00000475944 EPB41L4AQ9HCS5 686 aaPredicted RBP12.93□□□□□ -0.34
CDRT1-205ENST00000475944 STARD7Q9NQZ5 370 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 FBXO40Q9UH90 709 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 FEM1BQ9UK73 627 aa12.93□□□□□ -0.34
CDRT1-205ENST00000475944 ZHX1Q9UKY1 873 aaPredicted RBP12.93□□□□□ -0.34
CDRT1-205ENST00000475944 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 IGKV6D-41A0A0C4DH26 115 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 SMCHD1A6NHR9 2005 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 DCDC2CA8MYV0 355 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 TTLL1O95922 423 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 SLC4A3P48751 1232 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 ACLYP53396 1101 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 FPGSQ05932 587 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDRT1-205ENST00000475944 ANKRD33Q7Z3H0 272 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 MKL1Q969V6 931 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 CEP95Q96GE4 821 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 RNPC3Q96LT9 517 aaKnown RBP12.92□□□□□ -0.34
CDRT1-205ENST00000475944 TOX2Q96NM4 488 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 CDX2Q99626 313 aaPredicted RBP12.92□□□□□ -0.34
CDRT1-205ENST00000475944 SEMA6BQ9H3T3 888 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 SPC25Q9HBM1 224 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 TMEM39AQ9NV64 488 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
CDRT1-205ENST00000475944 MROH7Q68CQ1 1323 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 TMEM265A0A087WTH1 108 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 DUSP11O75319 330 aaKnown RBP12.91□□□□□ -0.34
CDRT1-205ENST00000475944 SNAI1O95863 264 aaPredicted RBP12.91□□□□□ -0.34
CDRT1-205ENST00000475944 FDX1P10109 184 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 ITGB8P26012 769 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 CST5P28325 142 aaPredicted RBP12.91□□□□□ -0.34
CDRT1-205ENST00000475944 OAZ1P54368 228 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 ACVR2BQ13705 512 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 KCNA10Q16322 511 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 ANKRD35Q8N283 1001 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 GMCL1P1Q8NEA9 526 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 KLHDC9Q8NEP7 349 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 GLT1D1Q96MS3 346 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 NACAP1Q9BZK3 213 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 ABHD16BQ9H3Z7 469 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 DCTPP1Q9H773 170 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 SLC38A10Q9HBR0 1119 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 RAVER2Q9HCJ3 691 aaKnown RBP12.91□□□□□ -0.34
CDRT1-205ENST00000475944 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.91□□□□□ -0.34
CDRT1-205ENST00000475944 MYH4Q9Y623 1939 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 PLIN4Q96Q06 1357 aa12.91□□□□□ -0.34
CDRT1-205ENST00000475944 ELP1O95163 1332 aa12.9□□□□□ -0.34
CDRT1-205ENST00000475944 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
CDRT1-205ENST00000475944 M0R2C6 588 aa12.9□□□□□ -0.34
CDRT1-205ENST00000475944 PRDM1O75626 825 aa12.9□□□□□ -0.34
CDRT1-205ENST00000475944 SLC3A2P08195 630 aaKnown RBP12.9□□□□□ -0.34
CDRT1-205ENST00000475944 TSPY3P0CV98 308 aa12.9□□□□□ -0.34
CDRT1-205ENST00000475944 TSPY8P0CW00 308 aa12.9□□□□□ -0.34
CDRT1-205ENST00000475944 PDE4BQ07343 736 aa12.9□□□□□ -0.34
CDRT1-205ENST00000475944 FAAP100Q0VG06 881 aa12.9□□□□□ -0.34
CDRT1-205ENST00000475944 TSHZ3Q63HK5 1081 aa12.9□□□□□ -0.34
CDRT1-205ENST00000475944 IFNL3Q8IZI9 196 aa12.9□□□□□ -0.34
CDRT1-205ENST00000475944 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
CDRT1-205ENST00000475944 PCSK9Q8NBP7 692 aaKnown RBP12.9□□□□□ -0.34
CDRT1-205ENST00000475944 MAFAQ8NHW3 353 aaPredicted RBP12.9□□□□□ -0.34
CDRT1-205ENST00000475944 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
CDRT1-205ENST00000475944 TTC41PQ6P2S7 1318 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 ERC2O15083 957 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 C6orf222P0C671 652 aaPredicted RBP12.89□□□□□ -0.35
CDRT1-205ENST00000475944 BMP3P12645 472 aa12.89□□□□□ -0.35
CDRT1-205ENST00000475944 STAT2P52630 851 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 1842.4 ms