RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 CDC27P30260 824 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 KIF5BP33176 963 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 ADD1P35611 737 aaKnown RBP13.03□□□□□ -0.32
LSG1-207ENST00000475763 RASA3Q14644 834 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 CTCFLQ8NI51 663 aaPredicted RBP13.03□□□□□ -0.32
LSG1-207ENST00000475763 NUP133Q8WUM0 1156 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
LSG1-207ENST00000475763 HOOK2Q96ED9 719 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 TMEM47Q9BQJ4 181 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 ADARB2Q9NS39 739 aaKnown RBP13.03□□□□□ -0.32
LSG1-207ENST00000475763 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 STX8Q9UNK0 236 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 ZDHHC9Q9Y397 364 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 PPP2R3BQ9Y5P8 575 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 PITPNM2Q9BZ72 1349 aa13.03□□□□□ -0.32
LSG1-207ENST00000475763 MYH6P13533 1939 aa13.02□□□□□ -0.32
LSG1-207ENST00000475763 MYH4Q9Y623 1939 aa13.02□□□□□ -0.32
LSG1-207ENST00000475763 NR1I2O75469 434 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 DDNO94850 711 aaPredicted RBP13.02□□□□□ -0.33
LSG1-207ENST00000475763 FMNL1O95466 1100 aaPredicted RBP13.02□□□□□ -0.33
LSG1-207ENST00000475763 ZSCAN22P10073 491 aaPredicted RBP13.02□□□□□ -0.33
LSG1-207ENST00000475763 RXRAP19793 462 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 GNAQP50148 359 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 PKP1Q13835 747 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 RAB11FIP4Q86YS3 637 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 TRIM22Q8IYM9 498 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 WASF1Q92558 559 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 DDX11Q96FC9 970 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 GBP4Q96PP9 640 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 LZTS2Q9BRK4 669 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 TMEM39BQ9GZU3 492 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 KANSL2Q9H9L4 492 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.02□□□□□ -0.33
LSG1-207ENST00000475763 ORC3Q9UBD5 711 aaPredicted RBP13.02□□□□□ -0.33
LSG1-207ENST00000475763 SYNPO2Q9UMS6 1093 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 SCN4AP35499 1836 aa13.02□□□□□ -0.33
LSG1-207ENST00000475763 DDX11L8A8MPP1 907 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 MPHOSPH10O00566 681 aaKnown RBP13.01□□□□□ -0.33
LSG1-207ENST00000475763 NRG2O14511 850 aaPredicted RBP13.01□□□□□ -0.33
LSG1-207ENST00000475763 ADH1BP00325 375 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 FDPSP14324 419 aaKnown RBP13.01□□□□□ -0.33
LSG1-207ENST00000475763 EPS15P42566 896 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 SSRP1Q08945 709 aaKnown RBP13.01□□□□□ -0.33
LSG1-207ENST00000475763 GRM4Q14833 912 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 ABCB5Q2M3G0 1257 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 CCDC144CPQ8IYA2 1237 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 RDH13Q8NBN7 331 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 MKL1Q969V6 931 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 TEPSINQ96N21 525 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 RNF26Q9BY78 433 aaPredicted RBP13.01□□□□□ -0.33
LSG1-207ENST00000475763 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 CABP5Q9NP86 173 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 GINM1Q9NU53 330 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 NYAP2Q9P242 653 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 ATP6V1DQ9Y5K8 247 aa13.01□□□□□ -0.33
LSG1-207ENST00000475763 H3BQV1 296 aa13□□□□□ -0.33
LSG1-207ENST00000475763 SMARCA1P28370 1054 aa13□□□□□ -0.33
LSG1-207ENST00000475763 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
LSG1-207ENST00000475763 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
LSG1-207ENST00000475763 VPS37CA5D8V6 355 aaPredicted RBP12.99□□□□□ -0.33
LSG1-207ENST00000475763 PALM3A6NDB9 673 aaPredicted RBP12.99□□□□□ -0.33
LSG1-207ENST00000475763 GLTPD2A6NH11 291 aa12.99□□□□□ -0.33
LSG1-207ENST00000475763 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
LSG1-207ENST00000475763 PRPF3O43395 683 aaKnown RBP12.99□□□□□ -0.33
LSG1-207ENST00000475763 DEXIO95424 95 aa12.99□□□□□ -0.33
LSG1-207ENST00000475763 F13A1P00488 732 aa12.99□□□□□ -0.33
LSG1-207ENST00000475763 HIRAP54198 1017 aaPredicted RBP12.99□□□□□ -0.33
LSG1-207ENST00000475763 AKAP17AQ02040 695 aaKnown RBP12.99□□□□□ -0.33
LSG1-207ENST00000475763 FUT2Q10981 343 aa12.99□□□□□ -0.33
LSG1-207ENST00000475763 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
LSG1-207ENST00000475763 DCAF15Q66K64 600 aa12.99□□□□□ -0.33
LSG1-207ENST00000475763 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
LSG1-207ENST00000475763 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
LSG1-207ENST00000475763 SLC26A6Q9BXS9 759 aa12.99□□□□□ -0.33
LSG1-207ENST00000475763 UTRNP46939 3433 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 ASTN2O75129 1339 aaPredicted RBP12.98□□□□□ -0.33
LSG1-207ENST00000475763 ATAD5Q96QE3 1844 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 PARP1P09874 1014 aaKnown RBP12.98□□□□□ -0.33
LSG1-207ENST00000475763 SNHG28P0DPA3 235 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 PTMSP20962 102 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 SLC19A1P41440 591 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 ICA1Q05084 483 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 ASPRV1Q53RT3 343 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
LSG1-207ENST00000475763 PHKBQ93100 1093 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
LSG1-207ENST00000475763 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 CLIP2Q9UDT6 1046 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 MAD2L2Q9UI95 211 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 WDR90Q96KV7 1748 aa12.98□□□□□ -0.33
LSG1-207ENST00000475763 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
LSG1-207ENST00000475763 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
LSG1-207ENST00000475763 IQCA1LA6NCM1 817 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms