RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 ERICH2A1L162 156 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 ATP2A1O14983 1001 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 PTPREP23469 700 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 OAZ1P54368 228 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 MORN1Q5T089 497 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 NCAPG2Q86XI2 1143 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 ABRAQ8N0Z2 381 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 ENAHQ8N8S7 591 aaPredicted RBP16.95■□□□□ 0.3
ABCF3-211ENST00000475728 TMEM106CQ9BVX2 250 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 SLC5A4Q9NY91 659 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 MTMR7Q9Y216 660 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 MGAMO43451 1857 aa16.95■□□□□ 0.3
ABCF3-211ENST00000475728 ZSWIM8A7E2V4 1837 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 REC8O95072 547 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 ERCC3P19447 782 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 MAP2K5Q13163 448 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 GPATCH4Q5T3I0 446 aaKnown RBP16.94■□□□□ 0.3
ABCF3-211ENST00000475728 IFIT1BQ5T764 474 aaKnown RBP16.94■□□□□ 0.3
ABCF3-211ENST00000475728 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 KCTD1Q719H9 257 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 REPS2Q8NFH8 660 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 SH3TC2Q8TF17 1288 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 APBA2Q99767 749 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 SLC38A10Q9HBR0 1119 aa16.94■□□□□ 0.3
ABCF3-211ENST00000475728 ZNF214Q9UL59 606 aaPredicted RBP16.94■□□□□ 0.3
ABCF3-211ENST00000475728 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
ABCF3-211ENST00000475728 SLC27A2O14975 620 aa16.93■□□□□ 0.3
ABCF3-211ENST00000475728 PDHBP11177 359 aa16.93■□□□□ 0.3
ABCF3-211ENST00000475728 FCER1AP12319 257 aa16.93■□□□□ 0.3
ABCF3-211ENST00000475728 ZKSCAN1P17029 563 aaPredicted RBP16.93■□□□□ 0.3
ABCF3-211ENST00000475728 GRB14Q14449 540 aa16.93■□□□□ 0.3
ABCF3-211ENST00000475728 NECTIN1Q15223 517 aa16.93■□□□□ 0.3
ABCF3-211ENST00000475728 USP6NLQ92738 828 aa16.93■□□□□ 0.3
ABCF3-211ENST00000475728 MTA3Q9BTC8 594 aa16.93■□□□□ 0.3
ABCF3-211ENST00000475728 PNMA2Q9UL42 364 aa16.93■□□□□ 0.3
ABCF3-211ENST00000475728 RLFQ13129 1914 aa16.92■□□□□ 0.3
ABCF3-211ENST00000475728 IFIT3O14879 490 aaKnown RBP16.92■□□□□ 0.3
ABCF3-211ENST00000475728 HMGCRP04035 888 aa16.92■□□□□ 0.3
ABCF3-211ENST00000475728 HOXC6P09630 235 aa16.92■□□□□ 0.3
ABCF3-211ENST00000475728 SNHG28P0DPA3 235 aa16.92■□□□□ 0.3
ABCF3-211ENST00000475728 ELNP15502 786 aa16.92■□□□□ 0.3
ABCF3-211ENST00000475728 CYP2B6P20813 491 aa16.92■□□□□ 0.3
ABCF3-211ENST00000475728 ZNF543Q08ER8 600 aa16.92■□□□□ 0.3
ABCF3-211ENST00000475728 SNRNP48Q6IEG0 339 aaKnown RBP16.92■□□□□ 0.3
ABCF3-211ENST00000475728 BTNL9Q6UXG8 535 aa16.92■□□□□ 0.3
ABCF3-211ENST00000475728 FBXO40Q9UH90 709 aa16.92■□□□□ 0.3
ABCF3-211ENST00000475728 EPB41L2O43491 1005 aaKnown RBP16.91■□□□□ 0.3
ABCF3-211ENST00000475728 INHAP05111 366 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 CAPN2P17655 700 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 MCM5P33992 734 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 KRT32Q14532 448 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 KCTD2Q14681 263 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 SEC23AQ15436 765 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 TKFCQ3LXA3 575 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 ASPRV1Q53RT3 343 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 SYDE2Q5VT97 1194 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 CYB5R4Q7L1T6 521 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 DPP9Q86TI2 863 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 CPXCR1Q8N123 301 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 NKX2-3Q8TAU0 364 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 CHMP4CQ96CF2 233 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 GPCPD1Q9NPB8 672 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 PRR12Q9ULL5 1215 aa16.91■□□□□ 0.3
ABCF3-211ENST00000475728 HTTP42858 3142 aa16.9■□□□□ 0.3
ABCF3-211ENST00000475728 EIF5BO60841 1220 aaKnown RBP16.9■□□□□ 0.3
ABCF3-211ENST00000475728 ADORA2AP29274 412 aa16.9■□□□□ 0.3
ABCF3-211ENST00000475728 WTAPQ15007 396 aa16.9■□□□□ 0.3
ABCF3-211ENST00000475728 TMEM67Q5HYA8 995 aa16.9■□□□□ 0.3
ABCF3-211ENST00000475728 STOX1Q6ZVD7 989 aa16.9■□□□□ 0.3
ABCF3-211ENST00000475728 MB21D2Q8IYB1 491 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-211ENST00000475728 TMTC2Q8N394 836 aa16.9■□□□□ 0.3
ABCF3-211ENST00000475728 CHST13Q8NET6 341 aa16.9■□□□□ 0.3
ABCF3-211ENST00000475728 MMP19Q99542 508 aa16.9■□□□□ 0.3
ABCF3-211ENST00000475728 RAVER2Q9HCJ3 691 aaKnown RBP16.9■□□□□ 0.3
ABCF3-211ENST00000475728 TAF6LQ9Y6J9 622 aa16.9■□□□□ 0.3
ABCF3-211ENST00000475728 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-211ENST00000475728 PARP1P09874 1014 aaKnown RBP16.89■□□□□ 0.29
ABCF3-211ENST00000475728 TSGA10IPQ3SY00 556 aa16.89■□□□□ 0.29
ABCF3-211ENST00000475728 MFSD14CQ5VZR4 134 aa16.89■□□□□ 0.29
ABCF3-211ENST00000475728 TMEM87BQ96K49 555 aa16.89■□□□□ 0.29
ABCF3-211ENST00000475728 PARP14Q460N5 1801 aa16.89■□□□□ 0.29
ABCF3-211ENST00000475728 PRC1O43663 620 aa16.88■□□□□ 0.29
ABCF3-211ENST00000475728 CCL5P13501 91 aa16.88■□□□□ 0.29
ABCF3-211ENST00000475728 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
ABCF3-211ENST00000475728 TTBK2Q6IQ55 1244 aa16.88■□□□□ 0.29
ABCF3-211ENST00000475728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.88■□□□□ 0.29
ABCF3-211ENST00000475728 RASGRP2Q7LDG7 609 aa16.88■□□□□ 0.29
ABCF3-211ENST00000475728 TRIB2Q92519 343 aa16.88■□□□□ 0.29
ABCF3-211ENST00000475728 RNF208Q9H0X6 261 aa16.88■□□□□ 0.29
ABCF3-211ENST00000475728 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
ABCF3-211ENST00000475728 MYCP01106 439 aaPredicted RBP16.87■□□□□ 0.29
ABCF3-211ENST00000475728 ICAM1P05362 532 aa16.87■□□□□ 0.29
ABCF3-211ENST00000475728 GJB1P08034 283 aa16.87■□□□□ 0.29
ABCF3-211ENST00000475728 HMGB1P09429 215 aaKnown RBP16.87■□□□□ 0.29
ABCF3-211ENST00000475728 SLC16A2P36021 539 aa16.87■□□□□ 0.29
ABCF3-211ENST00000475728 OLFML2BQ68BL8 750 aa16.87■□□□□ 0.29
ABCF3-211ENST00000475728 CATIPQ7Z7H3 387 aa16.87■□□□□ 0.29
ABCF3-211ENST00000475728 DDX11Q96FC9 970 aa16.87■□□□□ 0.29
ABCF3-211ENST00000475728 NEK1Q96PY6 1258 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms