RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 ASGR1P07306 291 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 STAT3P40763 770 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 KCNQ1P51787 676 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 SIAH1Q8IUQ4 282 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 MAGEB6Q8N7X4 407 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 SPC25Q9HBM1 224 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 ARHGEF10LQ9HCE6 1279 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 COG5Q9UP83 839 aa16.91■□□□□ 0.3
FAM3A-218ENST00000475657 TRANK1O15050 2925 aa16.9■□□□□ 0.3
FAM3A-218ENST00000475657 SNAI1O95863 264 aaPredicted RBP16.9■□□□□ 0.3
FAM3A-218ENST00000475657 CENPBP07199 599 aaPredicted RBP16.9■□□□□ 0.3
FAM3A-218ENST00000475657 TRIM27P14373 513 aa16.9■□□□□ 0.3
FAM3A-218ENST00000475657 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
FAM3A-218ENST00000475657 PPP1R12CQ9BZL4 782 aa16.9■□□□□ 0.3
FAM3A-218ENST00000475657 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
FAM3A-218ENST00000475657 ZNF214Q9UL59 606 aaPredicted RBP16.9■□□□□ 0.3
FAM3A-218ENST00000475657 PCDHA11Q9Y5I1 949 aa16.9■□□□□ 0.3
FAM3A-218ENST00000475657 PRRC2BQ5JSZ5 2229 aaKnown RBP16.9■□□□□ 0.3
FAM3A-218ENST00000475657 REV3LO60673 3130 aa16.9■□□□□ 0.3
FAM3A-218ENST00000475657 MYADML2A6NDP7 307 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 APBB1O00213 710 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 VWA5AO00534 786 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 C6orf222P0C671 652 aaPredicted RBP16.89■□□□□ 0.29
FAM3A-218ENST00000475657 CYP2C18P33260 490 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 GJA9P57773 515 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 NKX3-2P78367 333 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 PPP2R2DQ66LE6 453 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
FAM3A-218ENST00000475657 SPICE1Q8N0Z3 855 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 VTI1AQ96AJ9 217 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 SWAP70Q9UH65 585 aa16.89■□□□□ 0.29
FAM3A-218ENST00000475657 TLL1O43897 1013 aa16.88■□□□□ 0.29
FAM3A-218ENST00000475657 SLC43A3Q8NBI5 491 aa16.88■□□□□ 0.29
FAM3A-218ENST00000475657 SEZ6LQ9BYH1 1024 aa16.88■□□□□ 0.29
FAM3A-218ENST00000475657 MCM9Q9NXL9 1143 aa16.88■□□□□ 0.29
FAM3A-218ENST00000475657 DBNLQ9UJU6 430 aaKnown RBP16.88■□□□□ 0.29
FAM3A-218ENST00000475657 MTCH2Q9Y6C9 303 aa16.88■□□□□ 0.29
FAM3A-218ENST00000475657 MYO5AQ9Y4I1 1855 aaKnown RBP16.88■□□□□ 0.29
FAM3A-218ENST00000475657 DNAJC25-GNG10A0A024R161 153 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
FAM3A-218ENST00000475657 GTPBP6O43824 516 aaPredicted RBP16.87■□□□□ 0.29
FAM3A-218ENST00000475657 ICA1Q05084 483 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 ACVR2BQ13705 512 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 SKIV2LQ15477 1246 aaKnown RBP16.87■□□□□ 0.29
FAM3A-218ENST00000475657 GNASQ5JWF2 1037 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 OTOP2Q7RTS6 562 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 MICALL1Q8N3F8 863 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 REPS2Q8NFH8 660 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 ABHD16BQ9H3Z7 469 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 C11orf16Q9NQ32 467 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 ZHX1Q9UKY1 873 aaPredicted RBP16.87■□□□□ 0.29
FAM3A-218ENST00000475657 PPP1R9AQ9ULJ8 1098 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 SLC4A7Q9Y6M7 1214 aa16.87■□□□□ 0.29
FAM3A-218ENST00000475657 POLA2Q14181 598 aa16.86■□□□□ 0.29
FAM3A-218ENST00000475657 RPUSD2Q8IZ73 545 aaKnown RBP16.86■□□□□ 0.29
FAM3A-218ENST00000475657 CCDC17Q96LX7 622 aa16.86■□□□□ 0.29
FAM3A-218ENST00000475657 CRNKL1Q9BZJ0 848 aaKnown RBP16.86■□□□□ 0.29
FAM3A-218ENST00000475657 HIPK3Q9H422 1215 aa16.86■□□□□ 0.29
FAM3A-218ENST00000475657 FBXO28Q9NVF7 368 aa16.86■□□□□ 0.29
FAM3A-218ENST00000475657 MAGEB6P1A0A0J9YX57 407 aa16.85■□□□□ 0.29
FAM3A-218ENST00000475657 CABYRO75952 493 aa16.85■□□□□ 0.29
FAM3A-218ENST00000475657 RABGGTBP53611 331 aa16.85■□□□□ 0.29
FAM3A-218ENST00000475657 IRX5P78411 483 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-218ENST00000475657 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-218ENST00000475657 TMEM57Q8N5G2 664 aa16.85■□□□□ 0.29
FAM3A-218ENST00000475657 DDX11Q96FC9 970 aa16.85■□□□□ 0.29
FAM3A-218ENST00000475657 TEX13BQ9BXU2 312 aa16.85■□□□□ 0.29
FAM3A-218ENST00000475657 PI4K2BG5E9Z4 385 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 CTAGE5O15320 804 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 ADCY6O43306 1168 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 AKR1B1P15121 316 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 EVX2Q03828 476 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
FAM3A-218ENST00000475657 CCDC144BQ3MJ40 725 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.84■□□□□ 0.29
FAM3A-218ENST00000475657 ALYREFQ86V81 257 aaKnown RBP16.84■□□□□ 0.29
FAM3A-218ENST00000475657 SSH3Q8TE77 659 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 ANTXR1Q9H6X2 564 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 C1orf115Q9H7X2 142 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.84■□□□□ 0.29
FAM3A-218ENST00000475657 PARP14Q460N5 1801 aa16.84■□□□□ 0.29
FAM3A-218ENST00000475657 MYOGP15173 224 aa16.83■□□□□ 0.28
FAM3A-218ENST00000475657 ATP2A2P16615 1042 aaKnown RBP16.83■□□□□ 0.28
FAM3A-218ENST00000475657 CLEC10AQ8IUN9 316 aa16.83■□□□□ 0.28
FAM3A-218ENST00000475657 HLA-CQ95604 372 aa16.83■□□□□ 0.28
FAM3A-218ENST00000475657 NOC4LQ9BVI4 516 aaKnown RBP16.83■□□□□ 0.28
FAM3A-218ENST00000475657 KANSL2Q9H9L4 492 aa16.83■□□□□ 0.28
FAM3A-218ENST00000475657 DCP1AQ9NPI6 582 aaPredicted RBP16.83■□□□□ 0.28
FAM3A-218ENST00000475657 NOP58Q9Y2X3 529 aaKnown RBP16.83■□□□□ 0.28
FAM3A-218ENST00000475657 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
FAM3A-218ENST00000475657 ATP2A1O14983 1001 aa16.82■□□□□ 0.28
FAM3A-218ENST00000475657 SURF6O75683 361 aaKnown RBP16.82■□□□□ 0.28
FAM3A-218ENST00000475657 PFKMP08237 780 aa16.82■□□□□ 0.28
FAM3A-218ENST00000475657 TMEM67Q5HYA8 995 aa16.82■□□□□ 0.28
FAM3A-218ENST00000475657 KHSRPQ92945 711 aaKnown RBP eCLIP16.82■□□□□ 0.28
FAM3A-218ENST00000475657 EAF2Q96CJ1 260 aaPredicted RBP16.82■□□□□ 0.28
FAM3A-218ENST00000475657 VWCEQ96DN2 955 aa16.82■□□□□ 0.28
FAM3A-218ENST00000475657 GOPCQ9HD26 462 aa16.82■□□□□ 0.28
FAM3A-218ENST00000475657 TLR7Q9NYK1 1049 aaKnown RBP16.82■□□□□ 0.28
FAM3A-218ENST00000475657 GBF1Q92538 1859 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms