RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 CNPY2Q9Y2B0 182 aa14.86□□□□□ -0.03
CCDC57-208ENST00000475635 TACC3Q9Y6A5 838 aa14.86□□□□□ -0.03
CCDC57-208ENST00000475635 F5H6K3 240 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 PQBP1O60828 265 aaKnown RBP14.85□□□□□ -0.03
CCDC57-208ENST00000475635 NDUFB10O96000 172 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 CLTBP09497 229 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 ITGB8P26012 769 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 KLRC3Q07444 240 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 GIMAP6Q6P9H5 292 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC57-208ENST00000475635 KBTBD3Q8NAB2 608 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 OSBP2Q969R2 916 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 DDX11Q96FC9 970 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 RIPK3Q9Y572 518 aa14.85□□□□□ -0.03
CCDC57-208ENST00000475635 ADAMTS4O75173 837 aa14.84□□□□□ -0.03
CCDC57-208ENST00000475635 SLC4A3P48751 1232 aa14.84□□□□□ -0.03
CCDC57-208ENST00000475635 CPXCR1Q8N123 301 aa14.84□□□□□ -0.03
CCDC57-208ENST00000475635 MSL3Q8N5Y2 521 aaKnown RBP14.84□□□□□ -0.03
CCDC57-208ENST00000475635 PRPF38AQ8NAV1 312 aaKnown RBP14.84□□□□□ -0.03
CCDC57-208ENST00000475635 APPBP2Q92624 585 aa14.84□□□□□ -0.03
CCDC57-208ENST00000475635 CDX2Q99626 313 aaPredicted RBP14.84□□□□□ -0.03
CCDC57-208ENST00000475635 SEMA6BQ9H3T3 888 aa14.84□□□□□ -0.03
CCDC57-208ENST00000475635 CLIP2Q9UDT6 1046 aa14.84□□□□□ -0.03
CCDC57-208ENST00000475635 SYNGAP1Q96PV0 1343 aa14.84□□□□□ -0.03
CCDC57-208ENST00000475635 SYNRGQ9UMZ2 1314 aa14.84□□□□□ -0.03
CCDC57-208ENST00000475635 GBF1Q92538 1859 aa14.84□□□□□ -0.03
CCDC57-208ENST00000475635 DNAJC25-GNG10A0A024R161 153 aa14.83□□□□□ -0.04
CCDC57-208ENST00000475635 KIAA0355O15063 1070 aa14.83□□□□□ -0.04
CCDC57-208ENST00000475635 RNF113AO15541 343 aaKnown RBP14.83□□□□□ -0.04
CCDC57-208ENST00000475635 GPAA1O43292 621 aa14.83□□□□□ -0.04
CCDC57-208ENST00000475635 SNAI1O95863 264 aaPredicted RBP14.83□□□□□ -0.04
CCDC57-208ENST00000475635 TDO2P48775 406 aa14.83□□□□□ -0.04
CCDC57-208ENST00000475635 SMAD3P84022 425 aaKnown RBP14.83□□□□□ -0.04
CCDC57-208ENST00000475635 TSHZ3Q63HK5 1081 aa14.83□□□□□ -0.04
CCDC57-208ENST00000475635 MAMDC4Q6UXC1 1216 aa14.83□□□□□ -0.04
CCDC57-208ENST00000475635 GPATCH3Q96I76 525 aa14.83□□□□□ -0.04
CCDC57-208ENST00000475635 TSEN34Q9BSV6 310 aaKnown RBP14.83□□□□□ -0.04
CCDC57-208ENST00000475635 COL25A1Q9BXS0 654 aaPredicted RBP14.83□□□□□ -0.04
CCDC57-208ENST00000475635 EPB41L4AQ9HCS5 686 aaPredicted RBP14.83□□□□□ -0.04
CCDC57-208ENST00000475635 STARD7Q9NQZ5 370 aa14.83□□□□□ -0.04
CCDC57-208ENST00000475635 ZHX1Q9UKY1 873 aaPredicted RBP14.83□□□□□ -0.04
CCDC57-208ENST00000475635 FAM184BQ9ULE4 1060 aa14.83□□□□□ -0.04
CCDC57-208ENST00000475635 IGKV6D-41A0A0C4DH26 115 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 M0R2C6 588 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 ATP2A1O14983 1001 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 ZBED4O75132 1171 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 PRDM1O75626 825 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 APPP05067 770 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 RAG1P15918 1043 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 GNAT2P19087 354 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 ACLYP53396 1101 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 EPHB4P54760 987 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 ZNF444Q8N0Y2 327 aaPredicted RBP14.82□□□□□ -0.04
CCDC57-208ENST00000475635 LRRC47Q8N1G4 583 aaKnown RBP14.82□□□□□ -0.04
CCDC57-208ENST00000475635 NUP133Q8WUM0 1156 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 KIFC2Q96AC6 838 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 CEP95Q96GE4 821 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 RNPC3Q96LT9 517 aaKnown RBP14.82□□□□□ -0.04
CCDC57-208ENST00000475635 TTYH1Q9H313 450 aaPredicted RBP14.82□□□□□ -0.04
CCDC57-208ENST00000475635 DCTPP1Q9H773 170 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 ZNF287Q9HBT7 754 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 TMEM39AQ9NV64 488 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 CTDP1Q9Y5B0 961 aaPredicted RBP14.82□□□□□ -0.04
CCDC57-208ENST00000475635 LCTP09848 1927 aa14.82□□□□□ -0.04
CCDC57-208ENST00000475635 LRRC37A2A6NM11 1700 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 MOXD2PA6NHM9 499 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 ZFYP08048 801 aaPredicted RBP14.81□□□□□ -0.04
CCDC57-208ENST00000475635 FPGSQ05932 587 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 FAAP100Q0VG06 881 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 KCNA10Q16322 511 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 ANKRD33Q7Z3H0 272 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 ZNF467Q7Z7K2 595 aaPredicted RBP14.81□□□□□ -0.04
CCDC57-208ENST00000475635 KLHDC9Q8NEP7 349 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 MKL1Q969V6 931 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 SLC38A10Q9HBR0 1119 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 RAVER2Q9HCJ3 691 aaKnown RBP14.81□□□□□ -0.04
CCDC57-208ENST00000475635 MTMR4Q9NYA4 1195 aa14.81□□□□□ -0.04
CCDC57-208ENST00000475635 MYADML2A6NDP7 307 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 DCDC2CA8MYV0 355 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 DUSP11O75319 330 aaKnown RBP14.8□□□□□ -0.04
CCDC57-208ENST00000475635 TTLL1O95922 423 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 ACVR2BQ13705 512 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 CCSAPQ6IQ19 270 aaPredicted RBP14.8□□□□□ -0.04
CCDC57-208ENST00000475635 ANKRD35Q8N283 1001 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 GMCL1P1Q8NEA9 526 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 MAFAQ8NHW3 353 aaPredicted RBP14.8□□□□□ -0.04
CCDC57-208ENST00000475635 MYLIPQ8WY64 445 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 FGD4Q96M96 766 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 TOX2Q96NM4 488 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.8□□□□□ -0.04
CCDC57-208ENST00000475635 FEM1BQ9UK73 627 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 SYNPO2Q9UMS6 1093 aa14.8□□□□□ -0.04
CCDC57-208ENST00000475635 PATL2C9JE40 543 aaKnown RBP14.79□□□□□ -0.04
CCDC57-208ENST00000475635 ADCY6O43306 1168 aa14.79□□□□□ -0.04
CCDC57-208ENST00000475635 C6orf222P0C671 652 aaPredicted RBP14.79□□□□□ -0.04
CCDC57-208ENST00000475635 CST5P28325 142 aaPredicted RBP14.79□□□□□ -0.04
CCDC57-208ENST00000475635 OAZ1P54368 228 aa14.79□□□□□ -0.04
CCDC57-208ENST00000475635 IRX5P78411 483 aaPredicted RBP14.79□□□□□ -0.04
CCDC57-208ENST00000475635 SLFN13Q68D06 897 aa14.79□□□□□ -0.04
CCDC57-208ENST00000475635 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms