RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 TIMP1P01033 207 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 DNAJB2P25686 324 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 CCDC174Q6PII3 467 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 CPXCR1Q8N123 301 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 MSL3Q8N5Y2 521 aaKnown RBP12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 REPS2Q8NFH8 660 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 TIFAQ96CG3 184 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 GLT1D1Q96MS3 346 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 HAUS7Q99871 368 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 SPC25Q9HBM1 224 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 FRMPD3Q5JV73 1810 aa12.22□□□□□ -0.45
PTP4A2-204ENST00000475464 ZNF236Q9UL36 1845 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 SYNGAP1Q96PV0 1343 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 SYNRGQ9UMZ2 1314 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 F5H6K3 240 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 DUSP11O75319 330 aaKnown RBP12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 SNAI1O95863 264 aaPredicted RBP12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 C6orf222P0C671 652 aaPredicted RBP12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 KLRC3Q07444 240 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 ACVR2BQ13705 512 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 SIRT2Q8IXJ6 389 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 ANKRD35Q8N283 1001 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 PRPF38AQ8NAV1 312 aaKnown RBP12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 PCSK9Q8NBP7 692 aaKnown RBP12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 KLHDC9Q8NEP7 349 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 PUS7LQ9H0K6 701 aaKnown RBP12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 ZNF576Q9H609 170 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 PRDM6Q9NQX0 595 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 ARPP21Q9UBL0 812 aaPredicted RBP12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 RIPK3Q9Y572 518 aa12.21□□□□□ -0.45
PTP4A2-204ENST00000475464 RLFQ13129 1914 aa12.21□□□□□ -0.46
PTP4A2-204ENST00000475464 ELP1O95163 1332 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 MROH7Q68CQ1 1323 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 ZBED9Q6R2W3 1325 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 NDUFB10O96000 172 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 PPIGQ13427 754 aaKnown RBP eCLIP12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 GNASQ5JWF2 1037 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 MFSD5Q6N075 450 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 MAMDC4Q6UXC1 1216 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 PPM1EQ8WY54 764 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 RAVER2Q9HCJ3 691 aaKnown RBP12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 DDX19BQ9UMR2 479 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 COG6Q9Y2V7 657 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 TTC28Q96AY4 2481 aa12.2□□□□□ -0.46
PTP4A2-204ENST00000475464 ROBO3Q96MS0 1386 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 NAV1Q8NEY1 1877 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 LTBP2Q14767 1821 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 MYADML2A6NDP7 307 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 ASGR1P07306 291 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 IRX5P78411 483 aaPredicted RBP12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 TJAP1Q5JTD0 557 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 CCSAPQ6IQ19 270 aaPredicted RBP12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 ZNF444Q8N0Y2 327 aaPredicted RBP12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 TMEM199Q8N511 208 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 STRBPQ96SI9 672 aaKnown RBP12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 GAS2L1Q99501 681 aaPredicted RBP12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 ABHD16BQ9H3Z7 469 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 TBX21Q9UL17 535 aa12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 ISY1Q9ULR0 285 aaKnown RBP12.19□□□□□ -0.46
PTP4A2-204ENST00000475464 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 DNAJC25-GNG10A0A024R161 153 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 A0A0U1RQG5 324 aaPredicted RBP12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 GRXCR1A8MXD5 290 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 ARVCFO00192 962 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 TLR3O15455 904 aaKnown RBP12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 APPP05067 770 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 ACRP10323 421 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 CSF2RAP15509 400 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 RASA1P20936 1047 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 CCDC144BQ3MJ40 725 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 SBK1Q52WX2 424 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 TMEM240Q5SV17 173 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 USP38Q8NB14 1042 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 PPP1R12CQ9BZL4 782 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 LRRCC1Q9C099 1032 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 ZNF287Q9HBT7 754 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 FBXO40Q9UH90 709 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 FEM1BQ9UK73 627 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 MUC3AQ02505 3323 aa12.18□□□□□ -0.46
PTP4A2-204ENST00000475464 A0A0G2JMZ2 1700 aa12.17□□□□□ -0.46
PTP4A2-204ENST00000475464 GSG1L2A8MUP6 293 aa12.17□□□□□ -0.46
PTP4A2-204ENST00000475464 ATP2A1O14983 1001 aa12.17□□□□□ -0.46
PTP4A2-204ENST00000475464 SMARCA5O60264 1052 aaPredicted RBP12.17□□□□□ -0.46
PTP4A2-204ENST00000475464 CST5P28325 142 aaPredicted RBP12.17□□□□□ -0.46
PTP4A2-204ENST00000475464 PBX2P40425 430 aa12.17□□□□□ -0.46
PTP4A2-204ENST00000475464 CDK7P50613 346 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 502.6 ms