RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 ZBTB1Q9Y2K1 713 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 SAMM50Q9Y512 469 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 ERVV-2B6SEH9 535 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 WDR93Q6P2C0 686 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 COG1Q8WTW3 980 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 TRIM47Q96LD4 638 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 ITIH6Q6UXX5 1313 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 IDEP14735 1019 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 CORO7P57737 925 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 FUT2Q10981 343 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 SND1Q7KZF4 910 aaKnown RBP eCLIP15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 ANKRD13CQ8N6S4 541 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 MB21D1Q8N884 522 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 PIGBQ92521 554 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 GPKOWQ92917 476 aaPredicted RBP eCLIP15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 FERMT2Q96AC1 680 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 JRKLQ9Y4A0 524 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 ZPR1O75312 459 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 SLC5A1P13866 664 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 IBSPP21815 317 aaPredicted RBP15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 FECHP22830 423 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 TRIM28Q13263 835 aaKnown RBP15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 HPS3Q969F9 1004 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 DMGDHQ9UI17 866 aaKnown RBP15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 CDHR2Q9BYE9 1310 aa15.39■□□□□ 0.05
SEMA4D-217ENST00000475255 PPFIA4O75335 1185 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 TRIM21P19474 475 aaKnown RBP15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 STAT6P42226 847 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 TSR1Q2NL82 804 aaKnown RBP15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 SRBD1Q8N5C6 995 aaKnown RBP15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 ESR2Q92731 530 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 LRRC10BA6NIK2 292 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 ATP2C1P98194 919 aaPredicted RBP15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 TUBB2AQ13885 445 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 ICE2Q659A1 982 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 CATIPQ7Z7H3 387 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 ZSCAN10Q96SZ4 725 aaPredicted RBP15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 TUBB2BQ9BVA1 445 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 MLXIPQ9HAP2 919 aa15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 MKRN1Q9UHC7 482 aaKnown RBP15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 TRPM3Q9HCF6 1732 aaPredicted RBP15.38■□□□□ 0.05
SEMA4D-217ENST00000475255 SEMA3EO15041 775 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 GTPBP6O43824 516 aaPredicted RBP15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 FGFR2P21802 821 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 ZNF658Q5TYW1 1059 aaPredicted RBP15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 HAUS4Q9H6D7 363 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 EFCC1Q9HA90 598 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 MYH2Q9UKX2 1941 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 GOLGA6CA6NDK9 693 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 PSMD14O00487 310 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 GOLGA6DP0CG33 693 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 ATP2B2Q01814 1243 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 ZNF512BQ96KM6 892 aaPredicted RBP15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 GOLGA6AQ9NYA3 693 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 JAG2Q9Y219 1238 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 MYH6P13533 1939 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 RPS6KA5O75582 802 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 GYG1P46976 350 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 TMTC2Q8N394 836 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 LRRC1Q9BTT6 524 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 BRMS1Q9HCU9 246 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 MYO1AQ9UBC5 1043 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 LRWD1Q9UFC0 647 aa15.37■□□□□ 0.05
SEMA4D-217ENST00000475255 GOLGA6BA6NDN3 693 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 NCK2O43639 380 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 PDE8AO60658 829 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 SPAG1Q07617 926 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 KCTD16Q68DU8 428 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 CCNI2Q6ZMN8 369 aaPredicted RBP15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 TNFRSF25Q93038 417 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 NHEJ1Q9H9Q4 299 aaPredicted RBP15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 MYH10P35580 1976 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 TNS3Q68CZ2 1445 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 EXOC5O00471 708 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 IL2RBP14784 551 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 TROAPQ12815 778 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 SH2D3CQ8N5H7 860 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 FAM76AQ8TAV0 307 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 LRRC15Q8TF66 581 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 RNF41Q9H4P4 317 aaPredicted RBP15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 CAPN6Q9Y6Q1 641 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 FAM205AQ6ZU69 1335 aa15.36■□□□□ 0.05
SEMA4D-217ENST00000475255 RASSF10A6NK89 507 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 LGALS16A8MUM7 142 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 PRPF3O43395 683 aaKnown RBP15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 STARD3NLO95772 234 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 CCDC96Q2M329 555 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 FBXW10Q5XX13 1052 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 KAT2BQ92831 832 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 WDR17Q8IZU2 1322 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 LMTK3Q96Q04 1460 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 ZNF263O14978 683 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 AARSP49588 968 aaKnown RBP eCLIP15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 ATP1A2P50993 1020 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 IRAK1P51617 712 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 TBC1D8BQ0IIM8 1120 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 TMEM60Q9H2L4 133 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 LOC102724159A0A0B4J2E5 919 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms