RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 RNF113AO15541 343 aaKnown RBP29.77■■■□□ 2.36
TMEM54-205ENST00000475208 RIPK3Q9Y572 518 aa29.77■■■□□ 2.36
TMEM54-205ENST00000475208 GPAA1O43292 621 aa29.76■■■□□ 2.35
TMEM54-205ENST00000475208 TDO2P48775 406 aa29.76■■■□□ 2.35
TMEM54-205ENST00000475208 CLIP2Q9UDT6 1046 aa29.76■■■□□ 2.35
TMEM54-205ENST00000475208 IGKV6D-41A0A0C4DH26 115 aa29.75■■■□□ 2.35
TMEM54-205ENST00000475208 A0A1W2PQ45 241 aaPredicted RBP29.75■■■□□ 2.35
TMEM54-205ENST00000475208 A0A1W2PQY0 241 aa29.75■■■□□ 2.35
TMEM54-205ENST00000475208 ZFYP08048 801 aaPredicted RBP29.75■■■□□ 2.35
TMEM54-205ENST00000475208 CLTBP09497 229 aa29.75■■■□□ 2.35
TMEM54-205ENST00000475208 MSL3Q8N5Y2 521 aaKnown RBP29.75■■■□□ 2.35
TMEM54-205ENST00000475208 PRPF38AQ8NAV1 312 aaKnown RBP29.75■■■□□ 2.35
TMEM54-205ENST00000475208 DDX11Q96FC9 970 aa29.75■■■□□ 2.35
TMEM54-205ENST00000475208 DCTPP1Q9H773 170 aa29.75■■■□□ 2.35
TMEM54-205ENST00000475208 TACC3Q9Y6A5 838 aa29.75■■■□□ 2.35
TMEM54-205ENST00000475208 CUL9Q8IWT3 2517 aa29.75■■■□□ 2.35
TMEM54-205ENST00000475208 ADAMTS4O75173 837 aa29.74■■■□□ 2.35
TMEM54-205ENST00000475208 PRDM1O75626 825 aa29.74■■■□□ 2.35
TMEM54-205ENST00000475208 GNAT2P19087 354 aa29.74■■■□□ 2.35
TMEM54-205ENST00000475208 SLC4A3P48751 1232 aa29.74■■■□□ 2.35
TMEM54-205ENST00000475208 CPXCR1Q8N123 301 aa29.74■■■□□ 2.35
TMEM54-205ENST00000475208 SYNGAP1Q96PV0 1343 aa29.73■■■□□ 2.35
TMEM54-205ENST00000475208 MYH4Q9Y623 1939 aa29.73■■■□□ 2.35
TMEM54-205ENST00000475208 M0R2C6 588 aa29.73■■■□□ 2.35
TMEM54-205ENST00000475208 PQBP1O60828 265 aaKnown RBP29.73■■■□□ 2.35
TMEM54-205ENST00000475208 APPP05067 770 aa29.73■■■□□ 2.35
TMEM54-205ENST00000475208 ITGB8P26012 769 aa29.73■■■□□ 2.35
TMEM54-205ENST00000475208 KIFC2Q96AC6 838 aa29.73■■■□□ 2.35
TMEM54-205ENST00000475208 ZNF287Q9HBT7 754 aa29.73■■■□□ 2.35
TMEM54-205ENST00000475208 CTDP1Q9Y5B0 961 aaPredicted RBP29.73■■■□□ 2.35
TMEM54-205ENST00000475208 SYNRGQ9UMZ2 1314 aa29.72■■■□□ 2.35
TMEM54-205ENST00000475208 UNC80Q8N2C7 3258 aa29.72■■■□□ 2.35
TMEM54-205ENST00000475208 DNAJC25-GNG10A0A024R161 153 aa29.72■■■□□ 2.35
TMEM54-205ENST00000475208 ATP2A1O14983 1001 aa29.72■■■□□ 2.35
TMEM54-205ENST00000475208 ZBED4O75132 1171 aa29.72■■■□□ 2.35
TMEM54-205ENST00000475208 SNAI1O95863 264 aaPredicted RBP29.72■■■□□ 2.35
TMEM54-205ENST00000475208 ZNF444Q8N0Y2 327 aaPredicted RBP29.72■■■□□ 2.35
TMEM54-205ENST00000475208 CEP95Q96GE4 821 aa29.72■■■□□ 2.35
TMEM54-205ENST00000475208 ZHX1Q9UKY1 873 aaPredicted RBP29.72■■■□□ 2.35
TMEM54-205ENST00000475208 FAM184BQ9ULE4 1060 aa29.72■■■□□ 2.35
TMEM54-205ENST00000475208 MAMDC4Q6UXC1 1216 aa29.71■■■□□ 2.35
TMEM54-205ENST00000475208 LRRC47Q8N1G4 583 aaKnown RBP29.71■■■□□ 2.35
TMEM54-205ENST00000475208 TSEN34Q9BSV6 310 aaKnown RBP29.71■■■□□ 2.35
TMEM54-205ENST00000475208 RAVER2Q9HCJ3 691 aaKnown RBP29.71■■■□□ 2.35
TMEM54-205ENST00000475208 MTMR4Q9NYA4 1195 aa29.71■■■□□ 2.35
TMEM54-205ENST00000475208 KIAA0355O15063 1070 aa29.7■■■□□ 2.35
TMEM54-205ENST00000475208 ACLYP53396 1101 aa29.7■■■□□ 2.35
TMEM54-205ENST00000475208 MKL1Q969V6 931 aa29.7■■■□□ 2.35
TMEM54-205ENST00000475208 SLC38A10Q9HBR0 1119 aa29.7■■■□□ 2.35
TMEM54-205ENST00000475208 FEM1BQ9UK73 627 aa29.7■■■□□ 2.35
TMEM54-205ENST00000475208 SMAD3P84022 425 aaKnown RBP29.69■■■□□ 2.34
TMEM54-205ENST00000475208 ZNF467Q7Z7K2 595 aaPredicted RBP29.69■■■□□ 2.34
TMEM54-205ENST00000475208 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.69■■■□□ 2.34
TMEM54-205ENST00000475208 IFNL3Q8IZI9 196 aa29.69■■■□□ 2.34
TMEM54-205ENST00000475208 STARD7Q9NQZ5 370 aa29.69■■■□□ 2.34
TMEM54-205ENST00000475208 SYNPO2Q9UMS6 1093 aa29.69■■■□□ 2.34
TMEM54-205ENST00000475208 PLIN4Q96Q06 1357 aa29.68■■■□□ 2.34
TMEM54-205ENST00000475208 PATL2C9JE40 543 aaKnown RBP29.68■■■□□ 2.34
TMEM54-205ENST00000475208 TTLL1O95922 423 aa29.68■■■□□ 2.34
TMEM54-205ENST00000475208 RAG1P15918 1043 aa29.68■■■□□ 2.34
TMEM54-205ENST00000475208 LRRFIP1Q32MZ4 808 aaKnown RBP29.68■■■□□ 2.34
TMEM54-205ENST00000475208 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.68■■■□□ 2.34
TMEM54-205ENST00000475208 GMCL1P1Q8NEA9 526 aa29.68■■■□□ 2.34
TMEM54-205ENST00000475208 KLHDC9Q8NEP7 349 aa29.68■■■□□ 2.34
TMEM54-205ENST00000475208 NUP133Q8WUM0 1156 aa29.68■■■□□ 2.34
TMEM54-205ENST00000475208 CDX2Q99626 313 aaPredicted RBP29.68■■■□□ 2.34
TMEM54-205ENST00000475208 SEMA6BQ9H3T3 888 aa29.68■■■□□ 2.34
TMEM54-205ENST00000475208 MOXD2PA6NHM9 499 aa29.67■■■□□ 2.34
TMEM54-205ENST00000475208 EPHB4P54760 987 aa29.67■■■□□ 2.34
TMEM54-205ENST00000475208 ANKRD33Q7Z3H0 272 aa29.67■■■□□ 2.34
TMEM54-205ENST00000475208 ANKRD35Q8N283 1001 aa29.67■■■□□ 2.34
TMEM54-205ENST00000475208 RNPC3Q96LT9 517 aaKnown RBP29.67■■■□□ 2.34
TMEM54-205ENST00000475208 TMEM39AQ9NV64 488 aa29.67■■■□□ 2.34
TMEM54-205ENST00000475208 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.67■■■□□ 2.34
TMEM54-205ENST00000475208 FBXO40Q9UH90 709 aa29.67■■■□□ 2.34
TMEM54-205ENST00000475208 MYADML2A6NDP7 307 aa29.66■■■□□ 2.34
TMEM54-205ENST00000475208 DUSP11O75319 330 aaKnown RBP29.66■■■□□ 2.34
TMEM54-205ENST00000475208 ACVR2BQ13705 512 aa29.66■■■□□ 2.34
TMEM54-205ENST00000475208 KCNA10Q16322 511 aa29.66■■■□□ 2.34
TMEM54-205ENST00000475208 SLFN13Q68D06 897 aa29.66■■■□□ 2.34
TMEM54-205ENST00000475208 FGD4Q96M96 766 aa29.66■■■□□ 2.34
TMEM54-205ENST00000475208 TOX2Q96NM4 488 aa29.66■■■□□ 2.34
TMEM54-205ENST00000475208 SEC62Q99442 399 aaKnown RBP29.66■■■□□ 2.34
TMEM54-205ENST00000475208 NACAP1Q9BZK3 213 aa29.66■■■□□ 2.34
TMEM54-205ENST00000475208 TSPY3P0CV98 308 aa29.65■■■□□ 2.34
TMEM54-205ENST00000475208 TSPY8P0CW00 308 aa29.65■■■□□ 2.34
TMEM54-205ENST00000475208 BMP3P12645 472 aa29.65■■■□□ 2.34
TMEM54-205ENST00000475208 OAZ1P54368 228 aa29.65■■■□□ 2.34
TMEM54-205ENST00000475208 FAAP100Q0VG06 881 aa29.65■■■□□ 2.34
TMEM54-205ENST00000475208 CCSAPQ6IQ19 270 aaPredicted RBP29.65■■■□□ 2.34
TMEM54-205ENST00000475208 CHST13Q8NET6 341 aa29.65■■■□□ 2.34
TMEM54-205ENST00000475208 NEDD1Q8NHV4 660 aa29.65■■■□□ 2.34
TMEM54-205ENST00000475208 TTYH1Q9H313 450 aaPredicted RBP29.65■■■□□ 2.34
TMEM54-205ENST00000475208 TTC41PQ6P2S7 1318 aa29.65■■■□□ 2.34
TMEM54-205ENST00000475208 DCDC2CA8MYV0 355 aa29.64■■■□□ 2.34
TMEM54-205ENST00000475208 FPGSQ05932 587 aa29.64■■■□□ 2.34
TMEM54-205ENST00000475208 PDE4BQ07343 736 aa29.64■■■□□ 2.34
TMEM54-205ENST00000475208 ISY1Q9ULR0 285 aaKnown RBP29.64■■■□□ 2.34
TMEM54-205ENST00000475208 ADCY6O43306 1168 aa29.63■■■□□ 2.33
TMEM54-205ENST00000475208 CST5P28325 142 aaPredicted RBP29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms