RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 PPIGQ13427 754 aaKnown RBP eCLIP19.16■□□□□ 0.66
ITGB1-211ENST00000475184 FAM83BQ5T0W9 1011 aa19.16■□□□□ 0.66
ITGB1-211ENST00000475184 C12orf60Q5U649 245 aa19.16■□□□□ 0.66
ITGB1-211ENST00000475184 CCSAPQ6IQ19 270 aaPredicted RBP19.16■□□□□ 0.66
ITGB1-211ENST00000475184 CCDC174Q6PII3 467 aa19.16■□□□□ 0.66
ITGB1-211ENST00000475184 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.16■□□□□ 0.66
ITGB1-211ENST00000475184 PBX4Q9BYU1 374 aa19.16■□□□□ 0.66
ITGB1-211ENST00000475184 KANSL2Q9H9L4 492 aa19.16■□□□□ 0.66
ITGB1-211ENST00000475184 FAM184BQ9ULE4 1060 aa19.16■□□□□ 0.66
ITGB1-211ENST00000475184 TCF20Q9UGU0 1960 aaKnown RBP19.15■□□□□ 0.66
ITGB1-211ENST00000475184 RAD21O60216 631 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 SNAI1O95863 264 aaPredicted RBP19.15■□□□□ 0.66
ITGB1-211ENST00000475184 PBX2P40425 430 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 TMEM240Q5SV17 173 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 AKNAD1Q5T1N1 836 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 CCDC129Q6ZRS4 1044 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 C16orf86Q6ZW13 317 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 C16orf59Q7L2K0 433 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 AMOTL1Q8IY63 956 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 ATXN2LQ8WWM7 1075 aaKnown RBP19.15■□□□□ 0.66
ITGB1-211ENST00000475184 PPM1EQ8WY54 764 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 GLT1D1Q96MS3 346 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 TEX13BQ9BXU2 312 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 ZHX1Q9UKY1 873 aaPredicted RBP19.15■□□□□ 0.66
ITGB1-211ENST00000475184 ELP1O95163 1332 aa19.15■□□□□ 0.66
ITGB1-211ENST00000475184 MYADML2A6NDP7 307 aa19.14■□□□□ 0.65
ITGB1-211ENST00000475184 GRXCR1A8MXD5 290 aa19.14■□□□□ 0.65
ITGB1-211ENST00000475184 DUSP11O75319 330 aaKnown RBP19.14■□□□□ 0.65
ITGB1-211ENST00000475184 CST5P28325 142 aaPredicted RBP19.14■□□□□ 0.65
ITGB1-211ENST00000475184 HSP90AB4PQ58FF6 505 aa19.14■□□□□ 0.65
ITGB1-211ENST00000475184 RASIP1Q5U651 963 aa19.14■□□□□ 0.65
ITGB1-211ENST00000475184 MAMDC4Q6UXC1 1216 aa19.14■□□□□ 0.65
ITGB1-211ENST00000475184 RHPN1Q8TCX5 695 aa19.14■□□□□ 0.65
ITGB1-211ENST00000475184 PRDM12Q9H4Q4 367 aa19.14■□□□□ 0.65
ITGB1-211ENST00000475184 THEGQ9P2T0 379 aa19.14■□□□□ 0.65
ITGB1-211ENST00000475184 DNAJC25-GNG10A0A024R161 153 aa19.13■□□□□ 0.65
ITGB1-211ENST00000475184 USP17L12C9JPN9 530 aa19.13■□□□□ 0.65
ITGB1-211ENST00000475184 USP17L21D6R901 530 aa19.13■□□□□ 0.65
ITGB1-211ENST00000475184 C6orf222P0C671 652 aaPredicted RBP19.13■□□□□ 0.65
ITGB1-211ENST00000475184 CSF2RAP15509 400 aa19.13■□□□□ 0.65
ITGB1-211ENST00000475184 ADD2P35612 726 aa19.13■□□□□ 0.65
ITGB1-211ENST00000475184 CDK7P50613 346 aa19.13■□□□□ 0.65
ITGB1-211ENST00000475184 SLFNL1Q499Z3 407 aa19.13■□□□□ 0.65
ITGB1-211ENST00000475184 SNRNP48Q6IEG0 339 aaKnown RBP19.13■□□□□ 0.65
ITGB1-211ENST00000475184 CLASRPQ8N2M8 674 aaKnown RBP19.13■□□□□ 0.65
ITGB1-211ENST00000475184 PCSK9Q8NBP7 692 aaKnown RBP19.13■□□□□ 0.65
ITGB1-211ENST00000475184 DDX11Q96FC9 970 aa19.13■□□□□ 0.65
ITGB1-211ENST00000475184 XIRP2A4UGR9 3374 aa19.13■□□□□ 0.65
ITGB1-211ENST00000475184 ASGR1P07306 291 aa19.12■□□□□ 0.65
ITGB1-211ENST00000475184 PSRC1Q6PGN9 363 aaPredicted RBP19.12■□□□□ 0.65
ITGB1-211ENST00000475184 TMEM199Q8N511 208 aa19.12■□□□□ 0.65
ITGB1-211ENST00000475184 VTI1AQ96AJ9 217 aa19.12■□□□□ 0.65
ITGB1-211ENST00000475184 DDRGK1Q96HY6 314 aa19.12■□□□□ 0.65
ITGB1-211ENST00000475184 ASB2Q96Q27 587 aa19.12■□□□□ 0.65
ITGB1-211ENST00000475184 SLF1Q9BQI6 1058 aa19.12■□□□□ 0.65
ITGB1-211ENST00000475184 A0A0U1RQG5 324 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-211ENST00000475184 ADCY6O43306 1168 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 IFIT2P09913 472 aaKnown RBP19.11■□□□□ 0.65
ITGB1-211ENST00000475184 ACRP10323 421 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 IRX5P78411 483 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-211ENST00000475184 ACVR2BQ13705 512 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 ZNF365Q70YC5 407 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 ZNF467Q7Z7K2 595 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-211ENST00000475184 ADAMTS19Q8TE59 1207 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 NUP88Q99567 741 aaPredicted RBP19.11■□□□□ 0.65
ITGB1-211ENST00000475184 PPP1R12CQ9BZL4 782 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 UPF3AQ9H1J1 476 aaKnown RBP19.11■□□□□ 0.65
ITGB1-211ENST00000475184 SPC25Q9HBM1 224 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 PAG1Q9NWQ8 432 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 RAPGEFL1Q9UHV5 662 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 RIPK3Q9Y572 518 aa19.11■□□□□ 0.65
ITGB1-211ENST00000475184 ARVCFO00192 962 aa19.1■□□□□ 0.65
ITGB1-211ENST00000475184 APBB1O00213 710 aa19.1■□□□□ 0.65
ITGB1-211ENST00000475184 FAM126BQ8IXS8 530 aa19.1■□□□□ 0.65
ITGB1-211ENST00000475184 KIF1BPQ96EK5 621 aa19.1■□□□□ 0.65
ITGB1-211ENST00000475184 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.1■□□□□ 0.65
ITGB1-211ENST00000475184 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.1■□□□□ 0.65
ITGB1-211ENST00000475184 PRRC2BQ5JSZ5 2229 aaKnown RBP19.09■□□□□ 0.65
ITGB1-211ENST00000475184 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 CCER2I3L3R5 266 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 TLR3O15455 904 aaKnown RBP19.09■□□□□ 0.65
ITGB1-211ENST00000475184 GJA9P57773 515 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 MRPS5P82675 430 aaKnown RBP19.09■□□□□ 0.65
ITGB1-211ENST00000475184 ADGRE1Q14246 886 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 RAB30Q15771 203 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 CCDC85BQ15834 202 aaPredicted RBP19.09■□□□□ 0.65
ITGB1-211ENST00000475184 CCDC144BQ3MJ40 725 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 GNASQ5JWF2 1037 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.09■□□□□ 0.65
ITGB1-211ENST00000475184 ABHD16BQ9H3Z7 469 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 MSRAQ9UJ68 235 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 SLC4A4Q9Y6R1 1079 aa19.09■□□□□ 0.65
ITGB1-211ENST00000475184 IGFBP4P22692 258 aa19.08■□□□□ 0.64
ITGB1-211ENST00000475184 SLC4A3P48751 1232 aa19.08■□□□□ 0.64
ITGB1-211ENST00000475184 CTR9Q6PD62 1173 aa19.08■□□□□ 0.64
ITGB1-211ENST00000475184 CPXCR1Q8N123 301 aa19.08■□□□□ 0.64
ITGB1-211ENST00000475184 PRPF38AQ8NAV1 312 aaKnown RBP19.08■□□□□ 0.64
ITGB1-211ENST00000475184 UHRF1Q96T88 793 aaPredicted RBP19.08■□□□□ 0.64
ITGB1-211ENST00000475184 BCL11AQ9H165 835 aa19.08■□□□□ 0.64
ITGB1-211ENST00000475184 BOLA2Q9H3K6 86 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms