RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-208	ENST00000474839	ZNF579	Q8NAF0	562 aa	Known RBP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	FAM71B	Q8TC56	605 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	EHD2	Q9NZN4	543 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MAP3K15	Q6ZN16	1313 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	AFDN	P55196	1824 aa	Known RBP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	IGHMBP2	P38935	993 aa	Known RBP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CDKAL1	Q5VV42	579 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	KCTD16	Q68DU8	428 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CCDC24	Q8N4L8	307 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	LACRT	Q9GZZ8	138 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	FBXO3	Q9UK99	471 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	LMO7	Q8WWI1	1683 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ZEB2	O60315	1214 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	EZH2	Q15910	746 aa	Known RBP	13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PTPRO	Q16827	1216 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CCDC181	Q5TID7	509 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GPATCH11	Q8N954	259 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	RUFY1	Q96T51	708 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	VAT1L	Q9HCJ6	419 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	C5	P01031	1676 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	TSPY2	A6NKD2	308 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MYBL2	P10244	700 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PKN1	Q16512	942 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	TYW1B	Q6NUM6	668 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SMIM5	Q71RC9	77 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	RGPD5	Q99666	1765 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	STK36	Q9NRP7	1315 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	KRT86	O43790	486 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CSGALNACT2	Q8N6G5	542 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MSANTD4	Q8NCY6	345 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CPVL	Q9H3G5	476 aa		13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.54	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ATP1A2	P50993	1020 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MAP9	Q49MG5	647 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CCDC70	Q6NSX1	233 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	STAG1	Q8WVM7	1258 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	FERMT2	Q96AC1	680 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MTR	Q99707	1265 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	TANGO6	Q9C0B7	1094 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MMRN2	Q9H8L6	949 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	RAB21	Q9UL25	225 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GOLGA6C	A6NDK9	693 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PLEK	P08567	350 aa	Predicted RBP	13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GOLGA6D	P0CG33	693 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SPAG1	Q07617	926 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CCDC42	Q96M95	316 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	RNF26	Q9BY78	433 aa	Predicted RBP	13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GOLGA6A	Q9NYA3	693 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	REXO2	Q9Y3B8	237 aa	Known RBP	13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	DCC	P43146	1447 aa		13.53	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CCDC194	A0A1B0GVG4	234 aa		13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PSEN1	P49768	467 aa		13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ARID5A	Q03989	594 aa		13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SPA17	Q15506	151 aa		13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SRBD1	Q8N5C6	995 aa	Known RBP	13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	HDAC7	Q8WUI4	952 aa		13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	IFT81	Q8WYA0	676 aa		13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	LRWD1	Q9UFC0	647 aa		13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CAMTA1	Q9Y6Y1	1673 aa		13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MARF1	Q9Y4F3	1742 aa	Known RBP	13.52	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GOLGA6B	A6NDN3	693 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	RCCD1	A6NED2	376 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	CYP2D6	P10635	497 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	MMP14	P50281	582 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	USP14	P54578	494 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	KIF5A	Q12840	1032 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	INF2	Q27J81	1249 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	HEATR3	Q7Z4Q2	680 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	PACS2	Q86VP3	889 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	MB21D1	Q8N884	522 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	FAM76A	Q8TAV0	307 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	HSPA1L	P34931	641 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	PBX1	P40424	430 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	VGLL2	Q8N8G2	317 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	CCDC51	Q96ER9	411 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	RRP36	Q96EU6	259 aa	Known RBP	13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	PHF20	Q9BVI0	1012 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	MLXIP	Q9HAP2	919 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	RWDD2A	Q9UIY3	292 aa		13.52	□□□□□ -0.25
SKIV2L-208	ENST00000474839	BUB1	O43683	1085 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	AKR1B10	O60218	316 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	GOLGA8H	P0CJ92	632 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	ARID4A	P29374	1257 aa	Predicted RBP	13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	ASIC1	P78348	528 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.51	□□□□□ -0.25	1e-7	■■■■□ 24.3
SKIV2L-208	ENST00000474839	IL17A	Q16552	155 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	SUSD4	Q5VX71	490 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.51	□□□□□ -0.25	3e-7	■□□□□ 11.1
SKIV2L-208	ENST00000474839	NOC4L	Q9BVI4	516 aa	Known RBP	13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	SELENOO	Q9BVL4	669 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839		H0YHG0	523 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	PDE2A	O00408	941 aa	Predicted RBP	13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	PSMA7	O14818	248 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	NCK2	O43639	380 aa		13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	GTPBP6	O43824	516 aa	Predicted RBP	13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	CYLC1	P35663	651 aa	Predicted RBP	13.51	□□□□□ -0.25
SKIV2L-208	ENST00000474839	HERVK_113	P62684	666 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms